mRNA_E-fasciculatus_F_contig10033.48.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10033.48.1 vs. uniprot
Match: A0A6H5KLT5_9PHAE (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLT5_9PHAE) HSP 1 Score: 386 bits (991), Expect = 7.730e-134 Identity = 198/220 (90.00%), Postives = 205/220 (93.18%), Query Frame = 1 Query: 1 MMAPMRVLVGLSLCLVVVDGYNARVTTMSGGNGGTQPRGRFIAKAACAAASLTSLVVAAPFIVGSDGADSVAAVAAEAERNVAVAPSFADAIVNGKTSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTVLTNAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQLFINFGDNTFLDKSGFSPIGR 660
MMAPMRVL GLSLCLV+VDGYNA+V TMSGGNGGTQPRGRFIAKAACAAASLT L VAAPFIVGSD AD VAAVAAE RNVAVAP+ A+ + K SYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFT+L+ AGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQLFINFGDNTFLDKSGFSPIGR
Sbjct: 1 MMAPMRVLAGLSLCLVIVDGYNAKVPTMSGGNGGTQPRGRFIAKAACAAASLTGLAVAAPFIVGSDSADGVAAVAAETARNVAVAPALAEEALGSKPSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQLFINFGDNTFLDKSGFSPIGR 220
BLAST of mRNA_E-fasciculatus_F_contig10033.48.1 vs. uniprot
Match: A0A835YRY8_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRY8_9STRA) HSP 1 Score: 184 bits (466), Expect = 1.450e-54 Identity = 96/149 (64.43%), Postives = 114/149 (76.51%), Query Frame = 1 Query: 214 AAVAAEAERNVAVAPSFADAIVNGKTSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTVLTNAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQLFINFGDNTFLDKSGFSPIGR 660
AAV A A VA AP A A + K V+F V+L+ + G+FV++V PDWAP GAARF L ++ FF D RFFRVLKGFVAQFGI+GDP V AK+R + ++DDPVTQSNKRGTVVFAT+G N+RT+QLFINFGDN FLDK GFSPIG
Sbjct: 54 AAVGAAAGVGVAAAPKGAFAEGDPK---VQFQVELAPGKQGTFVMQVHPDWAPKGAARFLELVDSDFFTDVRFFRVLKGFVAQFGISGDPQVSAKWRASAIRDDPVTQSNKRGTVVFATAGANTRTSQLFINFGDNAFLDKMGFSPIGE 199
BLAST of mRNA_E-fasciculatus_F_contig10033.48.1 vs. uniprot
Match: A0A7S2TLE1_9EUKA (Peptidylprolyl isomerase n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TLE1_9EUKA) HSP 1 Score: 175 bits (444), Expect = 1.730e-50 Identity = 81/121 (66.94%), Postives = 101/121 (83.47%), Query Frame = 1 Query: 298 VKFDVQLSDEESGSFVVEVRPDWAPLGAARFTVLTNAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQLFINFGDNTFLDKSGFSPIGR 660
V+F+VQL+ +++ FV+EV P+WAP GA +F L N GF++DCRFFRV++GFV Q+GINGDP V KY+ A+ QDDPV SN+RGT+ FATSGKNSRTTQLFINFGDNTFLD+ GFSPIG+
Sbjct: 142 VEFEVQLTADKTDKFVIEVHPEWAPHGAEQFKKLVNDGFYDDCRFFRVVEGFVVQWGINGDPEVNKKYKKAI-QDDPVKTSNERGTLTFATSGKNSRTTQLFINFGDNTFLDRLGFSPIGK 261
BLAST of mRNA_E-fasciculatus_F_contig10033.48.1 vs. uniprot
Match: A0A7S3YYD7_9EUKA (Peptidylprolyl isomerase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YYD7_9EUKA) HSP 1 Score: 174 bits (442), Expect = 4.360e-50 Identity = 82/127 (64.57%), Postives = 101/127 (79.53%), Query Frame = 1 Query: 280 NGKTSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTVLTNAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQLFINFGDNTFLDKSGFSPIGR 660
+G V+F+VQL+ +++ FV+EV P+WAPLGA +F L GF+ DCRFFRV++GFV Q+GINGDP V KY+ + QDDPV SNKRGT+ FATSGKNSRTTQLFINFGDNTFLD+ GFSPIG+
Sbjct: 145 SGGVFNVEFEVQLTADKTDKFVIEVHPEWAPLGAEQFKKLVTDGFYNDCRFFRVVEGFVVQWGINGDPDVNKKYKKPI-QDDPVKTSNKRGTLTFATSGKNSRTTQLFINFGDNTFLDRLGFSPIGK 270
BLAST of mRNA_E-fasciculatus_F_contig10033.48.1 vs. uniprot
Match: A0A7S3YYN4_9EUKA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YYN4_9EUKA) HSP 1 Score: 169 bits (428), Expect = 8.660e-50 Identity = 79/117 (67.52%), Postives = 95/117 (81.20%), Query Frame = 1 Query: 310 VQLSDEESGSFVVEVRPDWAPLGAARFTVLTNAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQLFINFGDNTFLDKSGFSPIGR 660
VQL+ +++ FV+EV P+WAPLGA +F L GF+ DCRFFRV++GFV Q+GINGDP V KY+ + QDDPV SNKRGT+ FATSGKNSRTTQLFINFGDNTFLD+ GFSPIG+
Sbjct: 10 VQLTADKTDKFVIEVHPEWAPLGAEQFKKLVTDGFYNDCRFFRVVEGFVVQWGINGDPDVNKKYKKPI-QDDPVKTSNKRGTLTFATSGKNSRTTQLFINFGDNTFLDRLGFSPIGK 125
BLAST of mRNA_E-fasciculatus_F_contig10033.48.1 vs. uniprot
Match: A0A7S1C2E0_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C2E0_9STRA) HSP 1 Score: 168 bits (425), Expect = 7.920e-48 Identity = 90/155 (58.06%), Postives = 109/155 (70.32%), Query Frame = 1 Query: 211 VAAVAAEAERNVAVAPSFADAIVNGK-TSYVKFDVQLSDE---ESGSFVVEVRPDWAPLGAARFTVLTNAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQLFINFGD-NTFLDKSGFSPIGR 660
+A AA A + PS A+A + ++F V D +G+FVV++RPDWAP+GAARFT LT GF+ D RFFRV+ GF+AQFGIN DPAVQA +R ++DDPV SN RGT+VFATSG NSRTTQLFIN+ D NTFLDKSGFSP G
Sbjct: 92 LAGAAAAATAGIPFLPSIANANDDASGEKLIEFSVNNLDGVEGNTGTFVVKLRPDWAPIGAARFTELTEQGFWNDIRFFRVIPGFIAQFGINADPAVQATWRNKSLRDDPVKVSNTRGTLVFATSGPNSRTTQLFINYSDRNTFLDKSGFSPFGE 246
BLAST of mRNA_E-fasciculatus_F_contig10033.48.1 vs. uniprot
Match: A0A7S2RJE7_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJE7_9STRA) HSP 1 Score: 167 bits (423), Expect = 1.350e-47 Identity = 79/121 (65.29%), Postives = 92/121 (76.03%), Query Frame = 1 Query: 298 VKFDVQLSDEESGSFVVEVRPDWAPLGAARFTVLTNAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQLFINFGDNTFLDKSGFSPIGR 660
V F VQLS EE G ++V PDW+P GA RF L AGF+ DCRFFRVL GFVAQFGINGDPAV +++RG ++DDPVT +N RGT+ FAT G NSRTTQ+FINF DN FLD+SGFSP
Sbjct: 110 VLFTVQLSPEEEGQVGLKVHPDWSPRGAQRFRELVEAGFYNDCRFFRVLPGFVAQFGINGDPAVMSQWRGRNLRDDPVTVTNSRGTLSFATGGPNSRTTQVFINFKDNKFLDRSGFSPFAE 230
BLAST of mRNA_E-fasciculatus_F_contig10033.48.1 vs. uniprot
Match: A0A7S2XWI2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWI2_9STRA) HSP 1 Score: 163 bits (413), Expect = 4.090e-47 Identity = 77/122 (63.11%), Postives = 93/122 (76.23%), Query Frame = 1 Query: 295 YVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTVLTNAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQLFINFGDNTFLDKSGFSPIGR 660
YVKFDVQLSD ++GSFV+EV P WAP GA RF L + FF CRFFRV+K FVAQFGI+G+P VQ+++R ++DDPVTQ N +G++ FATSG +SRTTQLF N DN FLD GFSP R
Sbjct: 30 YVKFDVQLSDHDTGSFVLEVNPSWAPNGAQRFKELLDDDFFAGCRFFRVIKDFVAQFGIHGNPGVQSQWRDQKIKDDPVTQKNYKGSLTFATSGPDSRTTQLFFNLKDNFFLDSMGFSPFAR 151
BLAST of mRNA_E-fasciculatus_F_contig10033.48.1 vs. uniprot
Match: A0A7S2CBJ7_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CBJ7_9STRA) HSP 1 Score: 160 bits (405), Expect = 3.330e-45 Identity = 74/124 (59.68%), Postives = 93/124 (75.00%), Query Frame = 1 Query: 286 KTSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTVLTNAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQLFINFGDNTFLDKSGFSPIG 657
+T V FD+ D G+ V+EV P+WAPLGA RF L + G F++ RFFRVL GF+AQFGI+GDPAV AK+RG ++DDPV SNKRGT+ FAT G N+RT+Q+F N+GDN FLD+ GFSP G
Sbjct: 91 ETFDVTFDIVNEDGTGGAVVIEVHPEWAPLGAERFKELVSTGTFDENRFFRVLPGFIAQFGISGDPAVSAKWRGQNLRDDPVKVSNKRGTLTFATGGPNTRTSQIFFNYGDNQFLDRQGFSPFG 214
BLAST of mRNA_E-fasciculatus_F_contig10033.48.1 vs. uniprot
Match: A0A8J2S9F6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9F6_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.120e-44 Identity = 77/167 (46.11%), Postives = 109/167 (65.27%), Query Frame = 1 Query: 160 SLVVAAPFIVGSDGADSVAAVAAEAERNVAVAPSFADAIVNGKTSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTVLTNAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQLFINFGDNTFLDKSGFSPIGR 660
+L VAA ++G VA ++ +NV A + A K D + G+ +E++P+WAP+G RF L N GF+++ RFFRV+ GF+ QFG++GDPA+ KY+ A ++DDPV SNK+GT+VFAT+G N+RT+Q+FINFGDN FLD+ GFSPIG
Sbjct: 5 ALTVAASCLLG------VACLSLPTRKNVLQASAGAALATTLPAQAAKGDTATLETTEGTITIELKPEWAPIGVERFKELINVGFYDEARFFRVVPGFIVQFGLSGDPALNKKYKAANLKDDPVKVSNKKGTLVFATAGPNTRTSQMFINFGDNGFLDRQGFSPIGE 165 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10033.48.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10033.48.1 >prot_E-fasciculatus_F_contig10033.48.1 ID=prot_E-fasciculatus_F_contig10033.48.1|Name=mRNA_E-fasciculatus_F_contig10033.48.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=220bp MMAPMRVLVGLSLCLVVVDGYNARVTTMSGGNGGTQPRGRFIAKAACAAAback to top mRNA from alignment at E-fasciculatus_F_contig10033:137..2925- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10033.48.1 ID=mRNA_E-fasciculatus_F_contig10033.48.1|Name=mRNA_E-fasciculatus_F_contig10033.48.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2789bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10033:137..2925- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10033:137..2925- >mRNA_E-fasciculatus_F_contig10033.48.1 ID=mRNA_E-fasciculatus_F_contig10033.48.1|Name=mRNA_E-fasciculatus_F_contig10033.48.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1320bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10033:137..2925- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |