prot_E-fasciculatus_F_contig106.475.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig106.475.1
Unique Nameprot_E-fasciculatus_F_contig106.475.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length246
Homology
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BLAST of mRNA_E-fasciculatus_F_contig106.475.1 vs. uniprot
Match: D8LR36_ECTSI (DUF4149 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR36_ECTSI)

HSP 1 Score: 316 bits (809), Expect = 8.180e-107
Identity = 180/207 (86.96%), Postives = 187/207 (90.34%), Query Frame = 0 
Query:   40 MVLRRSLACAFAGLVLLGIVDGFVAPAFIPAATAGARVKSPVASSATIAGAAPRAPLVARRRSALAMTANKAPDKTIITNAAPLTFAAGCSAVAGAVAKINPHAAAFVQLVCLSIWLGMSVYATFIWPVITGLNMRHSSEFASLLGKLAPSFLQLSVAMIMSLGTSSLVIGRANGVQLGIIGISLGITLYNAIVLEPSAIEALEEEQ 246
            MV RRSLACA   LVLLGIVDGF+APAFIP ATAGARVK PVASS TIAGAA RAP VARR SAL MTANKAPD+T I NAAPLTFAAGCSAVA AVA+I+PHAAAFVQLVCLSIWLGMSVYATFIWPVITGLNMR SSEFASLLGKL PS+LQLSVAMIMSLGTSSLVIG AN  QL I+GI+LGITLYNAIVLEPSAIEALEEEQ
Sbjct:    1 MVRRRSLACA---LVLLGIVDGFIAPAFIPPATAGARVKLPVASSGTIAGAARRAPFVARRSSALTMTANKAPDRTAIANAAPLTFAAGCSAVASAVAEISPHAAAFVQLVCLSIWLGMSVYATFIWPVITGLNMRDSSEFASLLGKLGPSYLQLSVAMIMSLGTSSLVIGHANTTQLVILGIALGITLYNAIVLEPSAIEALEEEQ 204
[Close]
BLAST of mRNA_E-fasciculatus_F_contig106.475.1 vs. uniprot
Match: A0A6H5LKX2_9PHAE (DUF4149 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKX2_9PHAE)

HSP 1 Score: 311 bits (798), Expect = 2.840e-104
Identity = 179/210 (85.24%), Postives = 188/210 (89.52%), Query Frame = 0 
Query:   40 MVLRRSLACAFAGLVLLGIVDGFVAPAFIPAATAGARVKSPVASSA---TIAGAAPRAPLVARRRSALAMTANKAPDKTIITNAAPLTFAAGCSAVAGAVAKINPHAAAFVQLVCLSIWLGMSVYATFIWPVITGLNMRHSSEFASLLGKLAPSFLQLSVAMIMSLGTSSLVIGRANGVQLGIIGISLGITLYNAIVLEPSAIEALEEEQ 246
            MVLR SLACA   LVLLGIVDGF+APAFIP ATAGARVK PVASSA   TIAGAAPRAPLV RR  AL MTANKAPD+T+I NA PLTFAAGCSAVA AVA+I+PHAAAFVQLVCLSIWLGMSVYATFIWPVITGLNMR SSEFASLLGKL PS+LQLSVAMIMSLGTSSLVIG AN  QL I+GI+LGITLYNAIVLEPSA+EALEEEQ
Sbjct:    1 MVLRGSLACA---LVLLGIVDGFIAPAFIPPATAGARVKLPVASSAPTATIAGAAPRAPLVDRRSRALTMTANKAPDQTVIANAVPLTFAAGCSAVASAVAEISPHAAAFVQLVCLSIWLGMSVYATFIWPVITGLNMRDSSEFASLLGKLGPSYLQLSVAMIMSLGTSSLVIGHANTTQLVILGIALGITLYNAIVLEPSAVEALEEEQ 207
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig106.475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LR36_ECTSI8.180e-10786.96DUF4149 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5LKX2_9PHAE2.840e-10485.24DUF4149 domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025423Domain of unknown function DUF4149PFAMPF13664DUF4149coord: 151..242
e-value: 1.3E-5
score: 25.4
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 210..214
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..139
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..169
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 170..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 190..209
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 99..118
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 235..246
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 140..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 215..234
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..68
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 69..79
NoneNo IPR availableTMHMMTMhelixcoord: 115..137
NoneNo IPR availableTMHMMTMhelixcoord: 46..68
NoneNo IPR availableTMHMMTMhelixcoord: 149..171
NoneNo IPR availableTMHMMTMhelixcoord: 217..239
NoneNo IPR availableTMHMMTMhelixcoord: 191..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig106contigE-fasciculatus_F_contig106:243..3825 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig106.475.1mRNA_E-fasciculatus_F_contig106.475.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig106 243..3825 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig106.475.1 ID=prot_E-fasciculatus_F_contig106.475.1|Name=mRNA_E-fasciculatus_F_contig106.475.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=246bp
PHTPTYTQHQHPGRQKEIQAPAPGRCLLLEYFAAVFNSVMVLRRSLACAF
AGLVLLGIVDGFVAPAFIPAATAGARVKSPVASSATIAGAAPRAPLVARR
RSALAMTANKAPDKTIITNAAPLTFAAGCSAVAGAVAKINPHAAAFVQLV
CLSIWLGMSVYATFIWPVITGLNMRHSSEFASLLGKLAPSFLQLSVAMIM
SLGTSSLVIGRANGVQLGIIGISLGITLYNAIVLEPSAIEALEEEQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025423DUF4149