mRNA_E-fasciculatus_F_contig1058.461.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Match: D8LMG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMG0_ECTSI) HSP 1 Score: 428 bits (1101), Expect = 9.210e-151 Identity = 218/222 (98.20%), Postives = 220/222 (99.10%), Query Frame = 1
Query: 124 MDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHSVEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGVIMLLLLSIILLPFGIRVNATLTMAKLYFLD 789
MDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQ FFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHSVEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVG+IMLLLLSIILLPFGIR+NATL MAKLYFLD
Sbjct: 1 MDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQTFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHSVEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGIIMLLLLSIILLPFGIRINATLAMAKLYFLD 222
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Match: A0A835Z945_9STRA (UNC-50 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z945_9STRA) HSP 1 Score: 295 bits (754), Expect = 2.140e-97 Identity = 154/263 (58.56%), Postives = 190/263 (72.24%), Query Frame = 1
Query: 1 MLP-SSVGGRYAPHRHGSSYAQSMSASWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHSVEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGVIMLLLLSIILLPFGIRVNATLTMAKLYFL 786
MLP GRYAPHR SSY S +P+Y R+FD+ Q+DME+ DQMVTLLS+NP RVYKTAYYRKQTKN WARDDP FAVLQ F V A+G+AFG R W Y+ L+ ++V +HWLL GV ++ R +AN+ +L R+HSVEQ VEW+YA DIH N+FF LF+ +YV Q LLLP+L+G SV +L+L+N LYA+ F YFY+THLGYRSLPFL TE FLYPVV V+ LL S++L G+RVN T MA +YFL
Sbjct: 1 MLPLDGRNGRYAPHRRHSSYGGDRS----VPEYFARLFDFKQLDMESACDQMVTLLSLNPGRVYKTAYYRKQTKNQWARDDPAFAVLQLAFSVAGAVAYGMAFGLRAFWGYIALIANAVLLHWLLFGVAAATAGRALANAHMLVRRAHSVEQRVEWLYAFDIHCNAFFMLFIVVYVGQFLLLPVLLGPSVGALLLSNALYALGFGAYFYITHLGYRSLPFLCKTETFLYPVVAVVTLLATSVLLAALGMRVNMTRVMAHVYFL 259
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Match: A0A7S1Y6X4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y6X4_9STRA) HSP 1 Score: 241 bits (616), Expect = 1.030e-76 Identity = 129/242 (53.31%), Postives = 168/242 (69.42%), Query Frame = 1
Query: 67 MSASWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHS-VEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGVIMLLLLSIILLPFGIRVNATLTMAKLYFLD 789
MS+ YL R+ D QMD ++ DQM +LL P VYKTAYYRKQTKNHWARDDP F VLQA FL+V+ A+ VAF A + T++G L+HS+ +WL+ G ++ S+ R +AN L H+S S V Q VEW+YA DIH N+FFPLF LY VQ LLPL++G S +L++ANTLYAVAFS Y+Y+THLGYRSLPFL TEVF++P+ VI+L +L+++ PF N A++Y D
Sbjct: 1 MSSKGRPTQYLARLTDVRQMDAQSALDQMKSLLGSRPHTVYKTAYYRKQTKNHWARDDPAFCVLQAIFLLVSVVAYSVAFKAS-IGTFLGFLIHSLFWNWLVSGALVCSILREVANRHLTVHQSTSHVRQSVEWLYAFDIHCNAFFPLFCVLYGVQFFLLPLILGNSFLALVVANTLYAVAFSWYWYITHLGYRSLPFLTNTEVFMFPIAAVILLFVLNLVGYPFNFGWNFARVFAQIYLRD 241
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Match: A0A7S2U7N4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7N4_9STRA) HSP 1 Score: 241 bits (614), Expect = 9.320e-76 Identity = 127/248 (51.21%), Postives = 174/248 (70.16%), Query Frame = 1
Query: 46 GSSYAQSMSASWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARG-VWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHS-VEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGVIMLLLLSIILLPFGIRVNATLTMAKLYF 783
G S+ S YL R+ D QMD+++ DQM TL +++PQRVYKT+YYRKQTKNHWARDDP F LQ FL +A+ A+ VAF V + +G + S+ ++W G++++S+ R AN L H+S S V Q VEW+YA DIH N+FFPLFV LY +Q LLP+++G+S+ SL+LANTLYA AFS YFY+THLGYR+LPFL +TEVFL+P+ G++++ L++++ PFG NA+ MA YF
Sbjct: 41 GGGALSSLGTVMSPAQYLARLVDVQQMDVQSALDQMRTLCTLSPQRVYKTSYYRKQTKNHWARDDPAFCFLQMVFLALASIAYCVAFREDSLVSSTIGFAIKSILINWFGLGILIASIGREFANRHLTVHQSSSHVRQGVEWLYAFDIHCNAFFPLFVALYGLQFFLLPIVLGKSLLSLVLANTLYAAAFSWYFYITHLGYRALPFLSSTEVFLFPIAGIMIVYLINLVGYPFGFGWNASRIMAHFYF 288
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Match: A0A7R9YBX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBX5_9STRA) HSP 1 Score: 239 bits (610), Expect = 1.320e-75 Identity = 125/238 (52.52%), Postives = 168/238 (70.59%), Query Frame = 1
Query: 46 GSSYAQSMSASWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHSVEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGVIMLLLLSIILLPFGIRVNAT 759
G + A +S S+P+YL R+ D+ MD EAT DQM+TL S +P RVYKT +YRKQ KN WARDDP FAV Q L V A+ +AF + Y+ L+L+ V V W L G V++++ ++AN LLQ SHSV Q+VEW+YA DIH N+FFPLF+ ++V+Q LLP+L+ + S+IL+N LYA AFSVYFY+THLGYR+LPFL TEV+LYP+ V + +LS+ + P G+R+NAT
Sbjct: 14 GYTRATRVSLPASVPEYLCRVLDFRSMDFEATLDQMLTLASSDPGRVYKTNFYRKQMKNQWARDDPAFAVAQVLLLSVVAVAYALAFRVDSLSGYLSLILYCVVVDWFLFGCVVATIGWFVANKYLLQSHSHSVAQKVEWLYAFDIHCNAFFPLFLLVHVLQFFLLPILLLKVYPSMILSNLLYAAAFSVYFYITHLGYRALPFLTKTEVYLYPIGVVALAFVLSLFIAPLGVRINAT 251
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Match: A0A7S0G7V0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G7V0_9STRA) HSP 1 Score: 239 bits (609), Expect = 6.020e-75 Identity = 130/252 (51.59%), Postives = 176/252 (69.84%), Query Frame = 1
Query: 49 SSYAQSMSASWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGL--LLHSVGVHWLLCGVVMSSLCRWIANSRLL-QH----RSHSVEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGVIMLLLLSIILLPFGIRVNATLTMAKLYF 783
SSY + S+ YL R+ D+ QMD+++ DQM TL ++ PQRVYKT+YYRKQTK+HW+RDDP FA+LQ FL VA+ A+ +AF G Y L +++ +++LL GVV+S++CR IAN+ L QH SH V Q VEW+YA DIH N+FFP FV +Y Q LLP+++ + + SLI++NTLYA+AF YFY+THLGYR+LPFL TEVFL+PV GV + +L+ I PFG+ NA+ +A LYF
Sbjct: 41 SSYGGMSAMSYDPQQYLHRILDFQQMDVQSALDQMRTLCTLQPQRVYKTSYYRKQTKDHWSRDDPAFAILQIGFLAVASLAYCIAFRVSGNMIYGTLRFAFNNIIINYLLSGVVISTICRSIANTYLTHQHPRNSNSHVVRQGVEWLYAFDIHCNAFFPFFVLIYCAQFFLLPVVLQRGLVSLIVSNTLYALAFGWYFYITHLGYRALPFLSGTEVFLFPVAGVAAIYVLNFIGFPFGLGFNASRLVAHLYF 292
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Match: A0A7S2ENT4_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ENT4_TRICV) HSP 1 Score: 238 bits (608), Expect = 1.490e-74 Identity = 130/244 (53.28%), Postives = 174/244 (71.31%), Query Frame = 1
Query: 67 MSASWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVW----TYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHS-VEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGVIMLLLLSIILLPFGIRVNATLTMAKLYF 783
+++S + YL R+ D QMD ++ DQM TLL+ PQRVYKTAYYRKQTKNHWARDDP FA LQ FL VA+ A+ VAFG+ G+ +G L S+ ++WL G+V +S+CR I+N+ L+ H S + V Q VE++YA DIH N+FFPLFV +Y VQ LLP+++G+ + +L+L+N L+A AF YFYVTHLGYR+LPFL TEVFL+PV V++L L++I PFG NA+ MA +YF
Sbjct: 67 LTSSMTPSQYLSRILDVGQMDFQSALDQMKTLLTPQPQRVYKTAYYRKQTKNHWARDDPAFAALQIAFLSVASLAYSVAFGSDGLGGTLTAALGFGLKSILINWLAVGLVTASVCRSISNNHLVVHSSAAHVRQRVEFLYAFDIHCNAFFPLFVLIYGVQFFLLPVVLGRGLMALLLSNALFAAAFGWYFYVTHLGYRALPFLTNTEVFLFPVALVVLLFFLNLIGHPFGFGWNASRIMAYVYF 310
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Match: A0A1E7FEU6_9STRA (UNC-50 protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEU6_9STRA) HSP 1 Score: 232 bits (592), Expect = 4.170e-73 Identity = 121/240 (50.42%), Postives = 171/240 (71.25%), Query Frame = 1
Query: 67 MSASWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHS-VEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGVIMLLLLSIILLPFGIRVNATLTMAKLYF 783
M++S S Y+ R+ D+ QMD+++ DQM T+LS P VYKTAYYRKQTKNHWARDDP FA L+ FL V+ A+ ++F V + L+SV +WL G +++++ R +AN L H+S S V Q VEW+YA DIH N+FFP+FV LY VQ LLPL++G+S++SL+++NTLYA F+ Y+Y+THLGYR+LPFL TEVFL+PV + ++ +L+++ PFG+ NA+ MA +YF
Sbjct: 1 MTSSASTAQYIARLTDFRQMDIQSALDQMKTILSTRPHVVYKTAYYRKQTKNHWARDDPAFAALEFIFLTVSCIAYAISFRVP-VTEGIAFWLYSVLFNWLGLGFIIATVGREMANRHLTDHKSTSHVRQSVEWLYAFDIHCNAFFPVFVLLYGVQFFLLPLVLGKSLFSLVVSNTLYAAGFAWYWYITHLGYRALPFLSQTEVFLFPVAAIALVFVLNLVGYPFGLGWNASRIMAHIYF 239
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Match: A0A448ZP33_9STRA (Uncharacterized protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZP33_9STRA) HSP 1 Score: 232 bits (592), Expect = 1.190e-72 Identity = 123/243 (50.62%), Postives = 173/243 (71.19%), Query Frame = 1
Query: 58 AQSMSASWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHS-VEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGVIMLLLLSIILLPFGIRVNATLTMAKLYF 783
A S+SAS S YL R+ D+ QMD+++ DQM TLLS P VYKT+YYRKQTKNHWARDDP FA L+ FL ++ A+ ++F + + L+SV HWL G+++++ R +AN L +S+S V Q VEW+YA DIH N+FFP+FV LY VQ LLPL++G+S+++LI +NTLYA AF+ Y+Y+THLGYR+LPFL TEVFL+P+ + ++ +L+++ PFG+ NA+ MA +YF
Sbjct: 31 ASSVSASSSHAQYLSRLIDFKQMDIQSALDQMKTLLSTRPHVVYKTSYYRKQTKNHWARDDPAFAALELIFLTISCIAYAISFRVP-ISEGIAFFLYSVLFHWLGFGLIIATAGREMANRHLTDTKSNSHVRQSVEWLYAFDIHCNAFFPVFVLLYGVQFFLLPLVLGKSLFALIASNTLYAGAFAWYWYITHLGYRALPFLSQTEVFLFPIAAIGLVYVLNLVGYPFGMGWNASRIMAHIYF 272
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Match: A0A7S1GMY0_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GMY0_CYCTE) HSP 1 Score: 231 bits (588), Expect = 2.240e-72 Identity = 120/230 (52.17%), Postives = 169/230 (73.48%), Query Frame = 1
Query: 94 YLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHS-VEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGVIMLLLLSIILLPFGIRVNATLTMAKLY 780
YL R+ D+ QMD+++ DQM +LL P VYKT+YYRKQTKNHWARDDP F VLQA FL VA+ A+ VAF + + +G LLH++ +WL+ G +++++ R +AN L H+S S V+Q VEW+YA DIH N+FFPLF LY VQ LLPL++G+S+ + +L+NTLYA AFS Y+Y+THLGYR+LPFL TEVFL+P+ G+ ++ +L+++ PF + NA+ +A +Y
Sbjct: 21 YLARLTDFRQMDIQSALDQMRSLLGGRPHVVYKTSYYRKQTKNHWARDDPAFCVLQAVFLFVASLAYAVAFRST-LSGGMGFLLHTILWNWLVAGTIVATIARELANRHLCVHQSTSHVKQTVEWLYAFDIHCNAFFPLFCLLYGVQFFLLPLVLGKSLLAFLLSNTLYAAAFSWYWYITHLGYRALPFLSNTEVFLFPIAGIALVFVLNLVGYPFDMGWNASRLLATIY 249 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1058.461.1 >prot_E-fasciculatus_F_contig1058.461.1 ID=prot_E-fasciculatus_F_contig1058.461.1|Name=mRNA_E-fasciculatus_F_contig1058.461.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=264bp MLPSSVGGRYAPHRHGSSYAQSMSASWSLPDYLRRMFDYHQMDMEATADQback to top mRNA from alignment at E-fasciculatus_F_contig1058:1575..5116- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1058.461.1 ID=mRNA_E-fasciculatus_F_contig1058.461.1|Name=mRNA_E-fasciculatus_F_contig1058.461.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3542bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1058:1575..5116- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1058:1575..5116- >mRNA_E-fasciculatus_F_contig1058.461.1 ID=mRNA_E-fasciculatus_F_contig1058.461.1|Name=mRNA_E-fasciculatus_F_contig1058.461.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1584bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1058:1575..5116- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |