mRNA_E-fasciculatus_F_contig1058.461.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1058.461.1
Unique NamemRNA_E-fasciculatus_F_contig1058.461.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Match: D8LMG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMG0_ECTSI)

HSP 1 Score: 428 bits (1101), Expect = 9.210e-151
Identity = 218/222 (98.20%), Postives = 220/222 (99.10%), Query Frame = 1
Query:  124 MDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHSVEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGVIMLLLLSIILLPFGIRVNATLTMAKLYFLD 789
            MDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQ FFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHSVEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVG+IMLLLLSIILLPFGIR+NATL MAKLYFLD
Sbjct:    1 MDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQTFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHSVEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGIIMLLLLSIILLPFGIRINATLAMAKLYFLD 222          
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Match: A0A835Z945_9STRA (UNC-50 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z945_9STRA)

HSP 1 Score: 295 bits (754), Expect = 2.140e-97
Identity = 154/263 (58.56%), Postives = 190/263 (72.24%), Query Frame = 1
Query:    1 MLP-SSVGGRYAPHRHGSSYAQSMSASWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHSVEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGVIMLLLLSIILLPFGIRVNATLTMAKLYFL 786
            MLP     GRYAPHR  SSY    S    +P+Y  R+FD+ Q+DME+  DQMVTLLS+NP RVYKTAYYRKQTKN WARDDP FAVLQ  F V    A+G+AFG R  W Y+ L+ ++V +HWLL GV  ++  R +AN+ +L  R+HSVEQ VEW+YA DIH N+FF LF+ +YV Q LLLP+L+G SV +L+L+N LYA+ F  YFY+THLGYRSLPFL  TE FLYPVV V+ LL  S++L   G+RVN T  MA +YFL
Sbjct:    1 MLPLDGRNGRYAPHRRHSSYGGDRS----VPEYFARLFDFKQLDMESACDQMVTLLSLNPGRVYKTAYYRKQTKNQWARDDPAFAVLQLAFSVAGAVAYGMAFGLRAFWGYIALIANAVLLHWLLFGVAAATAGRALANAHMLVRRAHSVEQRVEWLYAFDIHCNAFFMLFIVVYVGQFLLLPVLLGPSVGALLLSNALYALGFGAYFYITHLGYRSLPFLCKTETFLYPVVAVVTLLATSVLLAALGMRVNMTRVMAHVYFL 259          
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Match: A0A7S1Y6X4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y6X4_9STRA)

HSP 1 Score: 241 bits (616), Expect = 1.030e-76
Identity = 129/242 (53.31%), Postives = 168/242 (69.42%), Query Frame = 1
Query:   67 MSASWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHS-VEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGVIMLLLLSIILLPFGIRVNATLTMAKLYFLD 789
            MS+      YL R+ D  QMD ++  DQM +LL   P  VYKTAYYRKQTKNHWARDDP F VLQA FL+V+  A+ VAF A  + T++G L+HS+  +WL+ G ++ S+ R +AN  L  H+S S V Q VEW+YA DIH N+FFPLF  LY VQ  LLPL++G S  +L++ANTLYAVAFS Y+Y+THLGYRSLPFL  TEVF++P+  VI+L +L+++  PF    N     A++Y  D
Sbjct:    1 MSSKGRPTQYLARLTDVRQMDAQSALDQMKSLLGSRPHTVYKTAYYRKQTKNHWARDDPAFCVLQAIFLLVSVVAYSVAFKAS-IGTFLGFLIHSLFWNWLVSGALVCSILREVANRHLTVHQSTSHVRQSVEWLYAFDIHCNAFFPLFCVLYGVQFFLLPLILGNSFLALVVANTLYAVAFSWYWYITHLGYRSLPFLTNTEVFMFPIAAVILLFVLNLVGYPFNFGWNFARVFAQIYLRD 241          
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Match: A0A7S2U7N4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7N4_9STRA)

HSP 1 Score: 241 bits (614), Expect = 9.320e-76
Identity = 127/248 (51.21%), Postives = 174/248 (70.16%), Query Frame = 1
Query:   46 GSSYAQSMSASWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARG-VWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHS-VEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGVIMLLLLSIILLPFGIRVNATLTMAKLYF 783
            G     S+    S   YL R+ D  QMD+++  DQM TL +++PQRVYKT+YYRKQTKNHWARDDP F  LQ  FL +A+ A+ VAF     V + +G  + S+ ++W   G++++S+ R  AN  L  H+S S V Q VEW+YA DIH N+FFPLFV LY +Q  LLP+++G+S+ SL+LANTLYA AFS YFY+THLGYR+LPFL +TEVFL+P+ G++++ L++++  PFG   NA+  MA  YF
Sbjct:   41 GGGALSSLGTVMSPAQYLARLVDVQQMDVQSALDQMRTLCTLSPQRVYKTSYYRKQTKNHWARDDPAFCFLQMVFLALASIAYCVAFREDSLVSSTIGFAIKSILINWFGLGILIASIGREFANRHLTVHQSSSHVRQGVEWLYAFDIHCNAFFPLFVALYGLQFFLLPIVLGKSLLSLVLANTLYAAAFSWYFYITHLGYRALPFLSSTEVFLFPIAGIMIVYLINLVGYPFGFGWNASRIMAHFYF 288          
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Match: A0A7R9YBX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBX5_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.320e-75
Identity = 125/238 (52.52%), Postives = 168/238 (70.59%), Query Frame = 1
Query:   46 GSSYAQSMSASWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHSVEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGVIMLLLLSIILLPFGIRVNAT 759
            G + A  +S   S+P+YL R+ D+  MD EAT DQM+TL S +P RVYKT +YRKQ KN WARDDP FAV Q   L V   A+ +AF    +  Y+ L+L+ V V W L G V++++  ++AN  LLQ  SHSV Q+VEW+YA DIH N+FFPLF+ ++V+Q  LLP+L+ +   S+IL+N LYA AFSVYFY+THLGYR+LPFL  TEV+LYP+  V +  +LS+ + P G+R+NAT
Sbjct:   14 GYTRATRVSLPASVPEYLCRVLDFRSMDFEATLDQMLTLASSDPGRVYKTNFYRKQMKNQWARDDPAFAVAQVLLLSVVAVAYALAFRVDSLSGYLSLILYCVVVDWFLFGCVVATIGWFVANKYLLQSHSHSVAQKVEWLYAFDIHCNAFFPLFLLVHVLQFFLLPILLLKVYPSMILSNLLYAAAFSVYFYITHLGYRALPFLTKTEVYLYPIGVVALAFVLSLFIAPLGVRINAT 251          
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Match: A0A7S0G7V0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G7V0_9STRA)

HSP 1 Score: 239 bits (609), Expect = 6.020e-75
Identity = 130/252 (51.59%), Postives = 176/252 (69.84%), Query Frame = 1
Query:   49 SSYAQSMSASWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGL--LLHSVGVHWLLCGVVMSSLCRWIANSRLL-QH----RSHSVEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGVIMLLLLSIILLPFGIRVNATLTMAKLYF 783
            SSY    + S+    YL R+ D+ QMD+++  DQM TL ++ PQRVYKT+YYRKQTK+HW+RDDP FA+LQ  FL VA+ A+ +AF   G   Y  L    +++ +++LL GVV+S++CR IAN+ L  QH     SH V Q VEW+YA DIH N+FFP FV +Y  Q  LLP+++ + + SLI++NTLYA+AF  YFY+THLGYR+LPFL  TEVFL+PV GV  + +L+ I  PFG+  NA+  +A LYF
Sbjct:   41 SSYGGMSAMSYDPQQYLHRILDFQQMDVQSALDQMRTLCTLQPQRVYKTSYYRKQTKDHWSRDDPAFAILQIGFLAVASLAYCIAFRVSGNMIYGTLRFAFNNIIINYLLSGVVISTICRSIANTYLTHQHPRNSNSHVVRQGVEWLYAFDIHCNAFFPFFVLIYCAQFFLLPVVLQRGLVSLIVSNTLYALAFGWYFYITHLGYRALPFLSGTEVFLFPVAGVAAIYVLNFIGFPFGLGFNASRLVAHLYF 292          
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Match: A0A7S2ENT4_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ENT4_TRICV)

HSP 1 Score: 238 bits (608), Expect = 1.490e-74
Identity = 130/244 (53.28%), Postives = 174/244 (71.31%), Query Frame = 1
Query:   67 MSASWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVW----TYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHS-VEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGVIMLLLLSIILLPFGIRVNATLTMAKLYF 783
            +++S +   YL R+ D  QMD ++  DQM TLL+  PQRVYKTAYYRKQTKNHWARDDP FA LQ  FL VA+ A+ VAFG+ G+       +G  L S+ ++WL  G+V +S+CR I+N+ L+ H S + V Q VE++YA DIH N+FFPLFV +Y VQ  LLP+++G+ + +L+L+N L+A AF  YFYVTHLGYR+LPFL  TEVFL+PV  V++L  L++I  PFG   NA+  MA +YF
Sbjct:   67 LTSSMTPSQYLSRILDVGQMDFQSALDQMKTLLTPQPQRVYKTAYYRKQTKNHWARDDPAFAALQIAFLSVASLAYSVAFGSDGLGGTLTAALGFGLKSILINWLAVGLVTASVCRSISNNHLVVHSSAAHVRQRVEFLYAFDIHCNAFFPLFVLIYGVQFFLLPVVLGRGLMALLLSNALFAAAFGWYFYVTHLGYRALPFLTNTEVFLFPVALVVLLFFLNLIGHPFGFGWNASRIMAYVYF 310          
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Match: A0A1E7FEU6_9STRA (UNC-50 protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEU6_9STRA)

HSP 1 Score: 232 bits (592), Expect = 4.170e-73
Identity = 121/240 (50.42%), Postives = 171/240 (71.25%), Query Frame = 1
Query:   67 MSASWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHS-VEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGVIMLLLLSIILLPFGIRVNATLTMAKLYF 783
            M++S S   Y+ R+ D+ QMD+++  DQM T+LS  P  VYKTAYYRKQTKNHWARDDP FA L+  FL V+  A+ ++F    V   +   L+SV  +WL  G +++++ R +AN  L  H+S S V Q VEW+YA DIH N+FFP+FV LY VQ  LLPL++G+S++SL+++NTLYA  F+ Y+Y+THLGYR+LPFL  TEVFL+PV  + ++ +L+++  PFG+  NA+  MA +YF
Sbjct:    1 MTSSASTAQYIARLTDFRQMDIQSALDQMKTILSTRPHVVYKTAYYRKQTKNHWARDDPAFAALEFIFLTVSCIAYAISFRVP-VTEGIAFWLYSVLFNWLGLGFIIATVGREMANRHLTDHKSTSHVRQSVEWLYAFDIHCNAFFPVFVLLYGVQFFLLPLVLGKSLFSLVVSNTLYAAGFAWYWYITHLGYRALPFLSQTEVFLFPVAAIALVFVLNLVGYPFGLGWNASRIMAHIYF 239          
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Match: A0A448ZP33_9STRA (Uncharacterized protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZP33_9STRA)

HSP 1 Score: 232 bits (592), Expect = 1.190e-72
Identity = 123/243 (50.62%), Postives = 173/243 (71.19%), Query Frame = 1
Query:   58 AQSMSASWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHS-VEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGVIMLLLLSIILLPFGIRVNATLTMAKLYF 783
            A S+SAS S   YL R+ D+ QMD+++  DQM TLLS  P  VYKT+YYRKQTKNHWARDDP FA L+  FL ++  A+ ++F    +   +   L+SV  HWL  G+++++  R +AN  L   +S+S V Q VEW+YA DIH N+FFP+FV LY VQ  LLPL++G+S+++LI +NTLYA AF+ Y+Y+THLGYR+LPFL  TEVFL+P+  + ++ +L+++  PFG+  NA+  MA +YF
Sbjct:   31 ASSVSASSSHAQYLSRLIDFKQMDIQSALDQMKTLLSTRPHVVYKTSYYRKQTKNHWARDDPAFAALELIFLTISCIAYAISFRVP-ISEGIAFFLYSVLFHWLGFGLIIATAGREMANRHLTDTKSNSHVRQSVEWLYAFDIHCNAFFPVFVLLYGVQFFLLPLVLGKSLFALIASNTLYAGAFAWYWYITHLGYRALPFLSQTEVFLFPIAAIGLVYVLNLVGYPFGMGWNASRIMAHIYF 272          
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Match: A0A7S1GMY0_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GMY0_CYCTE)

HSP 1 Score: 231 bits (588), Expect = 2.240e-72
Identity = 120/230 (52.17%), Postives = 169/230 (73.48%), Query Frame = 1
Query:   94 YLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHS-VEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGVIMLLLLSIILLPFGIRVNATLTMAKLY 780
            YL R+ D+ QMD+++  DQM +LL   P  VYKT+YYRKQTKNHWARDDP F VLQA FL VA+ A+ VAF +  +   +G LLH++  +WL+ G +++++ R +AN  L  H+S S V+Q VEW+YA DIH N+FFPLF  LY VQ  LLPL++G+S+ + +L+NTLYA AFS Y+Y+THLGYR+LPFL  TEVFL+P+ G+ ++ +L+++  PF +  NA+  +A +Y
Sbjct:   21 YLARLTDFRQMDIQSALDQMRSLLGGRPHVVYKTSYYRKQTKNHWARDDPAFCVLQAVFLFVASLAYAVAFRST-LSGGMGFLLHTILWNWLVAGTIVATIARELANRHLCVHQSTSHVKQTVEWLYAFDIHCNAFFPLFCLLYGVQFFLLPLVLGKSLLAFLLSNTLYAAAFSWYWYITHLGYRALPFLSNTEVFLFPIAGIALVFVLNLVGYPFDMGWNASRLLATIY 249          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1058.461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMG0_ECTSI9.210e-15198.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z945_9STRA2.140e-9758.56UNC-50 n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
A0A7S1Y6X4_9STRA1.030e-7653.31Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2U7N4_9STRA9.320e-7651.21Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7R9YBX5_9STRA1.320e-7552.52Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S0G7V0_9STRA6.020e-7551.59Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2ENT4_TRICV1.490e-7453.28Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A1E7FEU6_9STRA4.170e-7350.42UNC-50 protein n=1 Tax=Fragilariopsis cylindrus CC... [more]
A0A448ZP33_9STRA1.190e-7250.62Uncharacterized protein n=2 Tax=Pseudo-nitzschia T... [more]
A0A7S1GMY0_CYCTE2.240e-7252.17Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1058contigE-fasciculatus_F_contig1058:1575..5116 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score427.6
Seed ortholog evalue4.4e-117
Seed eggNOG ortholog2880.D8LMG0
Preferred nameUNC50
GOsGO:0000139,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005637,GO:0005737,GO:0005794,GO:0006810,GO:0006937,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0019866,GO:0023052,GO:0030173,GO:0031090,GO:0031224,GO:0031228,GO:0031300,GO:0031301,GO:0031503,GO:0031965,GO:0031967,GO:0031975,GO:0031984,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044057,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051239,GO:0051641,GO:0051668,GO:0051716,GO:0065007,GO:0090257,GO:0097120,GO:0097159,GO:0098588,GO:0098791,GO:1901363
EggNOG free text desc.protein transport
EggNOG OGsKOG3012@1,KOG3012@2759
Ec32 orthologEc-05_002620.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionUNC-50
Ec32 orthologEc-05_002620.3
Exons8
Model size792
Cds size792
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1058.461.1prot_E-fasciculatus_F_contig1058.461.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1058 1575..5116 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927555.4991748-CDS-E-fasciculatus_F_contig1058:1574..17201622927555.4991748-CDS-E-fasciculatus_F_contig1058:1574..1720Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1058 1575..1720 -
1695995593.3566008-CDS-E-fasciculatus_F_contig1058:1574..17201695995593.3566008-CDS-E-fasciculatus_F_contig1058:1574..1720Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1058 1575..1720 -
1622927555.5112596-CDS-E-fasciculatus_F_contig1058:2242..23571622927555.5112596-CDS-E-fasciculatus_F_contig1058:2242..2357Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1058 2243..2357 -
1695995593.3682828-CDS-E-fasciculatus_F_contig1058:2242..23571695995593.3682828-CDS-E-fasciculatus_F_contig1058:2242..2357Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1058 2243..2357 -
1622927555.5232294-CDS-E-fasciculatus_F_contig1058:2732..28621622927555.5232294-CDS-E-fasciculatus_F_contig1058:2732..2862Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1058 2733..2862 -
1695995593.3782787-CDS-E-fasciculatus_F_contig1058:2732..28621695995593.3782787-CDS-E-fasciculatus_F_contig1058:2732..2862Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1058 2733..2862 -
1622927555.5370924-CDS-E-fasciculatus_F_contig1058:3125..32501622927555.5370924-CDS-E-fasciculatus_F_contig1058:3125..3250Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1058 3126..3250 -
1695995593.3882625-CDS-E-fasciculatus_F_contig1058:3125..32501695995593.3882625-CDS-E-fasciculatus_F_contig1058:3125..3250Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1058 3126..3250 -
1622927555.5550408-CDS-E-fasciculatus_F_contig1058:3587..36521622927555.5550408-CDS-E-fasciculatus_F_contig1058:3587..3652Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1058 3588..3652 -
1695995593.3964317-CDS-E-fasciculatus_F_contig1058:3587..36521695995593.3964317-CDS-E-fasciculatus_F_contig1058:3587..3652Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1058 3588..3652 -
1622927555.5699735-CDS-E-fasciculatus_F_contig1058:4008..40341622927555.5699735-CDS-E-fasciculatus_F_contig1058:4008..4034Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1058 4009..4034 -
1695995593.4043276-CDS-E-fasciculatus_F_contig1058:4008..40341695995593.4043276-CDS-E-fasciculatus_F_contig1058:4008..4034Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1058 4009..4034 -
1622927555.5816598-CDS-E-fasciculatus_F_contig1058:4475..45371622927555.5816598-CDS-E-fasciculatus_F_contig1058:4475..4537Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1058 4476..4537 -
1695995593.412761-CDS-E-fasciculatus_F_contig1058:4475..45371695995593.412761-CDS-E-fasciculatus_F_contig1058:4475..4537Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1058 4476..4537 -
1622927555.5909867-CDS-E-fasciculatus_F_contig1058:4993..51161622927555.5909867-CDS-E-fasciculatus_F_contig1058:4993..5116Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1058 4994..5116 -
1695995593.4218183-CDS-E-fasciculatus_F_contig1058:4993..51161695995593.4218183-CDS-E-fasciculatus_F_contig1058:4993..5116Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1058 4994..5116 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1058.461.1

>prot_E-fasciculatus_F_contig1058.461.1 ID=prot_E-fasciculatus_F_contig1058.461.1|Name=mRNA_E-fasciculatus_F_contig1058.461.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=264bp
MLPSSVGGRYAPHRHGSSYAQSMSASWSLPDYLRRMFDYHQMDMEATADQ
MVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGV
AFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHSVE
QEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYA
VAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGVIMLLLLSIILLPFGIRV
NATLTMAKLYFLD*
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mRNA from alignment at E-fasciculatus_F_contig1058:1575..5116-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1058.461.1 ID=mRNA_E-fasciculatus_F_contig1058.461.1|Name=mRNA_E-fasciculatus_F_contig1058.461.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3542bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1058:1575..5116- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCTTCCCAGCAGCGTGGGGGGCAGATACGCTCCTCACCGACATGGGTC ATCGTATGCACAGTCCATGTCGGCGTCGTGGAGCCTTCCGGATTACTTGA GGAGGATGTTTGACTACCACCAGGTAGGCCAACAATATACTACAGTGTAA TCAGCTCTTCAGCATGTGCATTCGTCCACCCTTTGGTTAGGTGCAGTGCG GTGTATAACACCGACGGGGTGTTGGGTGCAGGATAGAGGAGTGAGAGGCA GAGGGAGAGAGGGGGGGTCAGGAGCAGAAAGGGAGACAGATTAATGCCTA CAATTTAGCTCTGGTGCTCTGGTGGACGATGGTAAAATAGGGGAAAGGAA GGGGTAGTGAGGACGAGAGTTCTGTGTAGTCGTGACTGACTGACTGATGG TCGCCTCACCCGTTAATTCATTGACCACGCCGGAAACCCTTGGATGTGGT TACAGCAGTCCGAAGACTGCTATCGCCAACTACCCACAGCTAACAGGCCT ATCGTGTCCGGCCTTCGCACCACCTGTACACGTTTCGCTCCTTGTTGTTA ATGTTGCTGCTGCTGCCTTCGCCACTAAGATGGACATGGAGGCGACGGCG GATCAAATGGTTACCCTTCTCAGCGTCAATCCTCAGAGGGTGTGAGTAAA GACTGCGTCTTTGTTGCCCGTTCTTGTCTCAGTTCCAGAATTTGTCGGCA ATGTTCGCGAGGTTTTGTACTGTTGGCCCTCGCGAGAGAAGGAGATAGAG TGCGCTTGGGGTGATTTGGTAGAAGGTGGGGCAAGGATATATCCTGTTCA ACGTTGCCTTCCTTAGTTTTCTGCCTTGTGCGCTATTCCTCAGAGAGCAG TAGTACTTTGTGGAAGGTCGCATGCAAGACCGAAGAACGCGTGTACTTTG TTGCCCTATCATCGCCATCCACTCATGCGCGTCCTTCTGCTTATTTCTCG TCCACGCGAATCATCTCTTGGTTTTTCTGGTGATAAAAACGTTGGTGTTG CTGTTCTTGCTGCTGCTGTTGCTGCTACTTCTGCTGCTGCGGGGGTGATG CGGAACGGGGTGGCATCGGTCCTTTGCAACAGCTATAAAACGGCGTACTA CCGAAAACGTGAGTCCTGGGCCTGTTTATTTCAGTGCGAACCGTGCTGTA TGCTGGGAGAACTGCAATGCGCTGTGCTGGACCTCATTTGCTGAGTAGCA ATCCTCGCCTTCCTCTTTGGTCCTACAATACACAAGTTGTCACACGAAGT CCTTCCAGTAGTAGCATGATAGACTTGCTGTGAAATTGTATGAGGCAACA CCAAACCGTTTATTTACTGTTTTTGTGTAAGGATTGCATCTTGGCTGCTT TTTGGCGCCTTTGATCCTCTTGGCCACCGTCTGTCTGGCCTTTCCTTTTC CTCTTTTCGCCGTCTCCCTCGCCCCACCCTCCCCCACTCCGAATGCATGT TTCGGCTTGGACAGAAACAAAAAACCACTGGGCAAGAGATGACCCTGGGT TTGCAGTTCTGCAGGCGTTTTTTCTTGTGGTGAGTCACTACAACTAACTT GCCGTCGACTTAAATCCCGGACTAGGCCGTGCGTGCACCCCCACCATGAC ACTTGTACCATTAATAATTGTCAACTCGTGCAGGAACTTGAGCATCGAGA CCACGGGTGAAAAGCAAGTGAAGGAAAGAATTTGCGACCCAAGAATGTGG ATGGCCTGTGGATATTTCTCCGCATACCACTGCACCAATCAATACAATCG ATCTCTCCAGACTTCGGCTGGCTTGTACTATTCGTGGTCTGCTCCTCGTT GTCCCCCCCGTGCCCACTCTGTGCTGAAGATGGTCGTACTGTCGTATTGC GCGGTGTTTGTAACAGGTGGCGACGTTCGCCTTCGGCGTGGCGTTTGGCG CTAGGGGCGTGTGGACGTATGTGGGATTGTTACTGCACTCGGTGGGGGTA CACTGGTTGTTGTGCGGGGTGGTGATGTCGTCCTTGTGCCGGTGAGTAGT AGCCTGTTTTTTTCATGTGTTGTCTTTCTTACGGCTGTGACCTGGAAGAT TTTTATGTGCTATTGTGGTGGTGGCTGGAGATTGATGTTTGCATCGGGCA TTTGGCAGGATTGCCCTCTTTACGGACTAACGCACGACCCGCAGCAAGGC CAGCCAAGATTGCGAGAGTTGGAACCTATGCGTGTGCACGAAAGAGTGAC AGGCTCACGGCAAAACGACACTGCTTTGTCACCAATTTCCGTTTGCTGTT GCAGATGGATAGCCAATAGTCGCCTGCTGCAGCACCGGTCTCATTCCGTG GAGCAAGAGGTGGAGTGGATGTACGCCTTGGACATCCACAGCAACTCCTT CTTCCCGCTCTTCGTATGTCTCTACGTTGTCCAGGTTTGTTTTTCGTCAT TTTTTGTTGTGTTGGGTTGACATGAACACTGCTGTGCACCTATCTACCAG TCGATGAAGATACCTATGATGCTTCCCTCACTCTCACTACTGTCTCGCAT GGCTATGTGGGCTCAAGAAGTGCGACACTTCGAATGTTCGAGTGATGAGC GTTGGTTGTATAGGGGCCCGCCAATGGCATTCATGTTAACACGCCGGAAT TGAGATGACGACAAGAATAGCAATACTATGTATAACCACCATCACTCGCT ATTATATATAGACTGAAAACTCGGCATCGAGACTCACGTGCTACATATCT TCCTCTCGCCCTTGTTCCTTGCGATATCGCATGAAACCGTGCACTTGTTC TGTTCGCAGCTGCTGCTGCTACCTCTACTGGTGGGTCAGTCGGTATGGTC CCTCATCCTGGCCAACACGCTCTACGCCGTGGCTTTCTCGGTGTACTTCT ATGTTACTCACCTGGGATATCGATGTGAGAACGGTACACTATCTCGTGGA CGGTTGGTTGGCCGTGAGTATGGAAAGGTGGCCGCTTGCGTTGAAGCGTG GGGCGTGGATGTTTATTTTGTTGTGCTGATGGTGTTCTCTCCGACTTATT TACCACCTCACCCCTGAGCCACCCATCGGGTGGTTTGGAACCTGTTGATG GGGTTTCCCAACTTGGTAAATTATGTACTCCGTATTGTATGACTTTTACA GCAGTTTCTTCACAGGTTGGTTGTAATGAAGGGTATGATGTGCCATGTGT TGCACCCTGCTCAACGAACACATTTTACTCTCTTGTTCATGATCTGTGTT AGTCGTCAATCGCGCTCTGTTGCCCTTCAAGCTAGAGGAATATCCTCTTG AGAGCCTGTTGCTCAAGTATGATCCTCGGCATGACCCCCCCCCCCCCCCC CCCCCCCTGCCTTGTCTTGTCTCGATGAAATCACGAACAAACACGAATCG GCAACCACGGATCGGCATGAATCGGTGGGTGTGCCTGCGGACACAGCTCT ACCGTTCTTGCACACAACGGAGGTGTTCCTGTACCCAGTGGTGGGGGTCA TCATGCTCCTGCTGCTTTCCATCATACTCTTGCCCTTCGGCATTCGCGTC AACGCCACCCTCACCATGGCAAAATTGTATTTCCTAGATTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1058:1575..5116-

>mRNA_E-fasciculatus_F_contig1058.461.1 ID=mRNA_E-fasciculatus_F_contig1058.461.1|Name=mRNA_E-fasciculatus_F_contig1058.461.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1584bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1058:1575..5116- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCTTCCCAGCAGCGTGGGGGGCAGATACGCTCCTCACCGACATGGGTC
ATCGTATGCACAGTCCATGTCGGCGTCGTGGAGCCTTCCGGATTACTTGA
GGAGGATGTTTGACTACCACCAGATGCTTCCCAGCAGCGTGGGGGGCAGA
TACGCTCCTCACCGACATGGGTCATCGTATGCACAGTCCATGTCGGCGTC
GTGGAGCCTTCCGGATTACTTGAGGAGGATGTTTGACTACCACCAGATGG
ACATGGAGGCGACGGCGGATCAAATGGTTACCCTTCTCAGCGTCAATCCT
CAGAGGGTATGGACATGGAGGCGACGGCGGATCAAATGGTTACCCTTCTC
AGCGTCAATCCTCAGAGGGTCTATAAAACGGCGTACTACCGAAAACCTAT
AAAACGGCGTACTACCGAAAACAAACAAAAAACCACTGGGCAAGAGATGA
CCCTGGGTTTGCAGTTCTGCAGGCGTTTTTTCTTGTGAAACAAAAAACCA
CTGGGCAAGAGATGACCCTGGGTTTGCAGTTCTGCAGGCGTTTTTTCTTG
TGGTGGCGACGTTCGCCTTCGGCGTGGCGTTTGGCGCTAGGGGCGTGTGG
ACGTATGTGGGATTGTTACTGCACTCGGTGGGGGTACACTGGTTGTTGTG
CGGGGTGGTGATGTCGTCCTTGTGCCGGTGGCGACGTTCGCCTTCGGCGT
GGCGTTTGGCGCTAGGGGCGTGTGGACGTATGTGGGATTGTTACTGCACT
CGGTGGGGGTACACTGGTTGTTGTGCGGGGTGGTGATGTCGTCCTTGTGC
CGATGGATAGCCAATAGTCGCCTGCTGCAGCACCGGTCTCATTCCGTGGA
GCAAGAGGTGGAGTGGATGTACGCCTTGGACATCCACAGCAACTCCTTCT
TCCCGCTCTTCGTATGTCTCTACGTTGTCCAGATGGATAGCCAATAGTCG
CCTGCTGCAGCACCGGTCTCATTCCGTGGAGCAAGAGGTGGAGTGGATGT
ACGCCTTGGACATCCACAGCAACTCCTTCTTCCCGCTCTTCGTATGTCTC
TACGTTGTCCAGCTGCTGCTGCTACCTCTACTGGTGGGTCAGTCGGTATG
GTCCCTCATCCTGGCCAACACGCTCTACGCCGTGGCTTTCTCGGTGTACT
TCTATGTTACTCACCTGGGATATCGATCTGCTGCTGCTACCTCTACTGGT
GGGTCAGTCGGTATGGTCCCTCATCCTGGCCAACACGCTCTACGCCGTGG
CTTTCTCGGTGTACTTCTATGTTACTCACCTGGGATATCGATCTCTACCG
TTCTTGCACACAACGGAGGTGTTCCTGTACCCAGTGGTGGGGGTCATCAT
GCTCCTGCTGCTTTCCATCATACTCTTGCCCTTCGGCATTCGCGTCAACG
CCACCCTCACCATGGCAAAATTGTATTTCCTAGATTGACTCTACCGTTCT
TGCACACAACGGAGGTGTTCCTGTACCCAGTGGTGGGGGTCATCATGCTC
CTGCTGCTTTCCATCATACTCTTGCCCTTCGGCATTCGCGTCAACGCCAC
CCTCACCATGGCAAAATTGTATTTCCTAGATTGA
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