mRNA_E-fasciculatus_F_contig1609.4166.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1609.4166.1
Unique NamemRNA_E-fasciculatus_F_contig1609.4166.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1609.4166.1 vs. uniprot
Match: A0A6H5K946_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K946_9PHAE)

HSP 1 Score: 442 bits (1136), Expect = 2.750e-150
Identity = 224/261 (85.82%), Postives = 235/261 (90.04%), Query Frame = 1 
Query:  457 LQWEEVHQLAQLSNMTHKDPRLVARWFDCHQYTGALVDRHLPQVSNHYFVHVGHLPGEEHRRVHHVAIRGTVSLADLGIDLKTRQVFDAECGCMFHAGFKEVADAVIEDLEAFLEPGAEVKLAGHSLGGAAAVIVAAKLKLRGHNIVKVMTFGAPMVTDAAGAAILRDLLPVMRVTHERDPVPLTPLESGSLTSVAAVKLLPKPGKGGGGGRQGDGDEVRPPSSRADSKVDEEGLIKGQRLQSGGEEGGEEAAEGWETAGL 1239
            LQWEEVHQLAQLSNMTHKDPRLVARWFDCHQYTGALVDRHLPQVSNHYFVHVGHLPGEEHRRVHHVAIRGTVSLADLGIDLKTRQVFD ECGCMFHAGFKEVADAV+EDLEAFLEPGAEVKL GHSLGGAAAVIVAAKL LRGHN+VKVMTFGAPMVTDAAGAAILRDLLPV+RVTHERDPVPLTPLESGSL+SVAAVKLLPKPGKGGGGGRQGDGD+  P +   DSK DE+ +++ Q L+             WETAGL
Sbjct:    3 LQWEEVHQLAQLSNMTHKDPRLVARWFDCHQYTGALVDRHLPQVSNHYFVHVGHLPGEEHRRVHHVAIRGTVSLADLGIDLKTRQVFDEECGCMFHAGFKEVADAVVEDLEAFLEPGAEVKLTGHSLGGAAAVIVAAKLMLRGHNVVKVMTFGAPMVTDAAGAAILRDLLPVVRVTHERDPVPLTPLESGSLSSVAAVKLLPKPGKGGGGGRQGDGDQKNPATVLQDSKADEDRVLQNQELEE------------WETAGL 251
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BLAST of mRNA_E-fasciculatus_F_contig1609.4166.1 vs. uniprot
Match: A0A7S1QBS3_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1QBS3_ALECA)

HSP 1 Score: 113 bits (283), Expect = 2.920e-25
Identity = 58/129 (44.96%), Postives = 80/129 (62.02%), Query Frame = 1 
Query:  637 RRVHHVAIRGTVSLADLGIDLKTRQVFDAECGCMFHAGFKEVADAVIEDLEAFLEPGAEVKLAGHSLGGAAAVIVAAKLKLRGHNIVKVMTFGAPMVTDAAGAAILRDLLPVMRVTHERDPVPLTPLES 1023
            RR  H+ IRG+  + DL  DL+  + +D ECGC  H GF + A  ++ED+   L+PG ++ L GHS+GGA AVIV  KL  RG ++ +V+TFGAP     +G    RD L V+RV H  DP+P  P+ S
Sbjct:   34 RREQHLFIRGSHLVEDLVTDLRIGKTWDEECGCYIHTGFLKKASVLLEDVAPLLDPGHDLVLVGHSMGGAMAVIVGMKLVARGFSVDRVVTFGAPKAVTRSGCDAWRDRLRVVRVVHHHDPIPTLPMLS 162
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BLAST of mRNA_E-fasciculatus_F_contig1609.4166.1 vs. uniprot
Match: A0A7S4UP58_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UP58_9DINO)

HSP 1 Score: 104 bits (259), Expect = 6.380e-21
Identity = 76/229 (33.19%), Postives = 112/229 (48.91%), Query Frame = 1 
Query:  463 WEEVHQLAQLSNMTHK---DPRLVARWFDCHQYTGALVDRHLPQVSNHYFVHVGHLPGEEHR--------------RVHHVAIRGTVSLADLGIDLKTRQVFDAECGCMFHAGFKEVADAVIEDLEAFLEPGAEVKLAGHSLGGAAAVIVAAKLKLRGHNIVKVMTFGAPMVTDAAGAAILRDLLPVMRVTHERDPVPLTPLE-----SGSLTSVAAVKLLPKPGKGGG 1083
            W E+  LA+ S++      D   + RW     + GA+  R  P   +  +     +   E R              R+  + +RGT    D   ++   + +D E GC  H GF+  AD V+E LE  L+  A++ L+GHSLGGA A IV  +L+ RG+++ +V+TFGAP VTD AGA        V+R+++  DPVPL P       SG  + + A  LL  P  G G
Sbjct:   69 WVELRSLAERSSLMRGGRIDLAGIRRWHIERGFPGAITLREWPAGRDEKYSRFTGVSDRERRECYYLYYEITGRGERLQQIFLRGTCVPEDCVFNVLVAKDWDEELGCHLHHGFRRRADEVLESLEPLLDREAKITLSGHSLGGAVATIVGMRLQARGYDVQEVVTFGAPKVTDRAGARGHAFRGRVLRISNMLDPVPLLPFGFCTPWSGPFSQLGAQVLLLPPRTGPG 297
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BLAST of mRNA_E-fasciculatus_F_contig1609.4166.1 vs. uniprot
Match: A0A2D4S7D9_9GAMM (Lipase n=1 Tax=Bermanella sp. TaxID=2024825 RepID=A0A2D4S7D9_9GAMM)

HSP 1 Score: 91.7 bits (226), Expect = 3.160e-17
Identity = 63/191 (32.98%), Postives = 92/191 (48.17%), Query Frame = 1 
Query:  463 WEEVHQLAQLSNMTHKDPRLVARWFDCHQYTGALVDRHLPQVSNHYFVHVGHLPGEE-------HRRVHHVAIRGTVSLADLGIDLKTRQVFDAECGCMFHAGFKEVADAVIEDLEAFLEPGAEVKLAGHSLGGAAAVIVAAKLKLRGHNIVKVMTFGAPMVTDAAGAAILRDLLPVMRVTHERDPVPLTP 1014
            +E + Q AQLSN+                YT   +   L  +  H  +H   L G E       H  V  + +RGT +L +  +DL+     D   G   H GF   A  ++ ++  FL+P   V+  GHSLGGAAAV++A  L  +G  +  ++TFG P VT+  GA     L P++RV  ++D VPL P
Sbjct:   22 FEVIEQSAQLSNLA---------------YTADDIQPPLSAMG-HNLIHQAVLDGVEVSYFLSLHEDVQFITVRGTANLQNAMVDLEINLKQDENLGIFVHQGFAHAAQGIMNNVTQFLDPSKPVRTTGHSLGGAAAVLLAMYLDKQGFELGDIITFGQPKVTNVGGAGAFSHL-PLLRVVTKKDIVPLVP 195
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BLAST of mRNA_E-fasciculatus_F_contig1609.4166.1 vs. uniprot
Match: A0A533ZFF0_9BACT (Lipase family protein n=2 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A533ZFF0_9BACT)

HSP 1 Score: 90.5 bits (223), Expect = 8.840e-17
Identity = 50/129 (38.76%), Postives = 78/129 (60.47%), Query Frame = 1 
Query:  628 EEHRRVHHVAIRGTVSLADLGIDLKTRQVFDAECGCMFHAGFKEVADAVIEDLEAFLEPGAEVKLAGHSLGGAAAVIVAAKLKLRGHNIVKVMTFGAPMVTDAAGAAILRDLLPVMRVTHERDPVPLTP 1014
            ++ ++V  V +RGT +L ++ +D+   ++ D+      H GF + A  V + ++  L+P  E+++ GHSLGGA AVIV   LK  G  + + MTFG P VT+  GA   R  LP++R  H++DPVPL P
Sbjct:   92 DDTKKVQWVVVRGTSNLLNVKLDVDYNKIVDSRAHVPLHKGFADAALQVYQFVKPLLKPDYEIRVTGHSLGGATAVIVLMLLKEDGLTLGQAMTFGQPKVTNRDGARKYR-ALPLLRFVHDKDPVPLLP 219
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BLAST of mRNA_E-fasciculatus_F_contig1609.4166.1 vs. uniprot
Match: A0A7S0C4Y0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C4Y0_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.570e-16
Identity = 55/138 (39.86%), Postives = 80/138 (57.97%), Query Frame = 1 
Query:  661 RGTVSLADLGIDLKTRQVFDAECGCMFHAGFKEVAD----AVIEDLEAFLEPGAEVKLAGHSLGGAAAVIVAAKLKLRGHNIVKVMTFGAPMVTDAAGAAILRDLLPV--MRVTHERDPVPLTPLESGSLTSVAAVKL 1056
            RGT   AD+  +L  +  +D E GC  HAGF+  AD    AV+  L +  +  + +++ GHSLGGA A+I+AAKL+ RG+ +V+  T G P V D +   +L  LLPV   R+ ++RD VP  P +    + V A KL
Sbjct:  104 RGTTLRADVLTNLNMKYKYDPELGCRLHAGFRNYADRLLHAVLPLLVSTTDKRSTIEVCGHSLGGAVALIMAAKLRKRGYTVVRATTIGLPKVCDRSAVPVLTLLLPVDISRIENDRDVVPNVPPQG---SHVPACKL 238
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BLAST of mRNA_E-fasciculatus_F_contig1609.4166.1 vs. uniprot
Match: A0A532EIJ5_9BACT (Lipase family protein n=1 Tax=Nitrospira sp. TaxID=70125 RepID=A0A532EIJ5_9BACT)

HSP 1 Score: 89.4 bits (220), Expect = 3.830e-16
Identity = 53/129 (41.09%), Postives = 75/129 (58.14%), Query Frame = 1 
Query:  628 EEHRRVHHVAIRGTVSLADLGIDLKTRQVFDAECGCMFHAGFKEVADAVIEDLEAFLEPGAEVKLAGHSLGGAAAVIVAAKLKLRGHNIVKVMTFGAPMVTDAAGAAILRDLLPVMRVTHERDPVPLTP 1014
            ++ R++  VA+RGT SL ++ +D+   +V D       H GF + A  V    +  L PG EV++ GHSLGGAAA IV    K  G  + + MTFG P VT+ AG    R L P++R  +++DPVPL P
Sbjct:  130 DDARKIQWVAVRGTWSLENVKLDVDYNKVVDGRLKIPLHKGFADTALQVYAFAKPLLPPGYEVRVTGHSLGGAAASIVLMLFKEDGVKLGQAMTFGQPKVTNRAGVEKYRGL-PLLRFVNDKDPVPLLP 257
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BLAST of mRNA_E-fasciculatus_F_contig1609.4166.1 vs. uniprot
Match: A0A1W9IZA4_9BACT (Lipase_3 domain-containing protein n=1 Tax=Nitrospira sp. ST-bin5 TaxID=1978765 RepID=A0A1W9IZA4_9BACT)

HSP 1 Score: 87.8 bits (216), Expect = 6.320e-16
Identity = 51/129 (39.53%), Postives = 74/129 (57.36%), Query Frame = 1 
Query:  628 EEHRRVHHVAIRGTVSLADLGIDLKTRQVFDAECGCMFHAGFKEVADAVIEDLEAFLEPGAEVKLAGHSLGGAAAVIVAAKLKLRGHNIVKVMTFGAPMVTDAAGAAILRDLLPVMRVTHERDPVPLTP 1014
            +E +++H V +RGT +L ++ +D+   +V D       H GF + A  V    +  L  G EV++ GHSLGGAAA IV    K  G  + + MTFG P VT+ AG    R L P++R  +++DPVPL P
Sbjct:   78 DEAKKIHWVVVRGTSNLDNVKLDVDYNKVVDGRLQIPLHKGFADTALQVYAFAKPLLRTGYEVRVTGHSLGGAAAAIVVMLFKEDGVKLGQAMTFGQPKVTNRAGVDKYRGL-PLLRFVNDKDPVPLLP 205
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BLAST of mRNA_E-fasciculatus_F_contig1609.4166.1 vs. uniprot
Match: A0A7S4LEG9_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LEG9_9EUGL)

HSP 1 Score: 89.4 bits (220), Expect = 9.430e-16
Identity = 66/196 (33.67%), Postives = 101/196 (51.53%), Query Frame = 1 
Query:  469 EVHQLAQLSNMTHKDPRLVARWFDCHQ--YTGALVDRHLPQVSNHYFVHVGHLPGEEHRRVHHVAIRGTVSLADLGIDLKTRQVFDAEC-GCMFHAGFKEVADAVIEDLEAFLEPGAE--------VKLAGHSLGGAAAVIVAAKLKLRGH---NIVKVMTFGAPMVTDAAGAAILRDLLPVMRVTHERDPVPLTP 1014
            E+ + A+L+N+  K    +  +    +    G LV R +P++   Y +     PG     V  V +RGT +  +LG  L+  Q  D    G  FH GFK++ADAV EDL+  L    E        V   GHS+GGA ++I+A K++ R +   ++ KV+TF  P VT A GA +  D +P++ V +E D +P  P
Sbjct:   86 ELVRFAELANLCGKTQEFLDNFVQDRRDWVRGPLVVREMPEIGQRYIILPTTNPGTHTAEVT-VIVRGTKTAQNLGTILQCWQTADPHLRGIPFHFGFKQMADAVYEDLQQQLRRLQEDEGMGPMKVNFTGHSMGGAVSLILAMKMRERANPEFDVGKVVTFAMPKVTTALGARVHSDAIPLLMVNNEMDIIPHLP 280
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1609.4166.1 vs. uniprot
Match: A0A849RL84_9BACT (Lipase family protein n=2 Tax=Nitrospira sp. TaxID=70125 RepID=A0A849RL84_9BACT)

HSP 1 Score: 87.0 bits (214), Expect = 1.520e-15
Identity = 50/129 (38.76%), Postives = 74/129 (57.36%), Query Frame = 1 
Query:  628 EEHRRVHHVAIRGTVSLADLGIDLKTRQVFDAECGCMFHAGFKEVADAVIEDLEAFLEPGAEVKLAGHSLGGAAAVIVAAKLKLRGHNIVKVMTFGAPMVTDAAGAAILRDLLPVMRVTHERDPVPLTP 1014
            ++ +++  VA+RGT +L ++ +D+   +V D       H GF + A  V    +  L PG EV++ GHSLGGAAA IV    K  G  + + MTFG P VT+ AG    R   P++R  +++DPVPL P
Sbjct:   95 DDAKKIQWVAVRGTSTLENVKLDVDYNKVVDGRLQIPLHKGFADTALQVYAFAKPLLRPGYEVRVTGHSLGGAAAAIVLMLFKEDGVKLGQAMTFGQPKVTNRAGVEKYRGF-PLLRFVNDKDPVPLLP 222
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1609.4166.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K946_9PHAE2.750e-15085.82Lipase_3 domain-containing protein n=2 Tax=Ectocar... [more]
A0A7S1QBS3_ALECA2.920e-2544.96Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A7S4UP58_9DINO6.380e-2133.19Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A2D4S7D9_9GAMM3.160e-1732.98Lipase n=1 Tax=Bermanella sp. TaxID=2024825 RepID=... [more]
A0A533ZFF0_9BACT8.840e-1738.76Lipase family protein n=2 Tax=Nitrospirae bacteriu... [more]
A0A7S0C4Y0_9STRA2.570e-1639.86Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A532EIJ5_9BACT3.830e-1641.09Lipase family protein n=1 Tax=Nitrospira sp. TaxID... [more]
A0A1W9IZA4_9BACT6.320e-1639.53Lipase_3 domain-containing protein n=1 Tax=Nitrosp... [more]
A0A7S4LEG9_9EUGL9.430e-1633.67Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A849RL84_9BACT1.520e-1538.76Lipase family protein n=2 Tax=Nitrospira sp. TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1609contigE-fasciculatus_F_contig1609:2..4152 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score486.9
Seed ortholog evalue8.2e-135
Seed eggNOG ortholog2880.D7FY67
EggNOG free text desc.phospholipase A1 activity
EggNOG OGsKOG4569@1,KOG4569@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorymitochondrion
Exons6
Model size1239
Cds size1068
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928075.883742-CDS-E-fasciculatus_F_contig1609:1..1061622928075.883742-CDS-E-fasciculatus_F_contig1609:1..106Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 2..106 -
1695995813.3141437-CDS-E-fasciculatus_F_contig1609:1..1061695995813.3141437-CDS-E-fasciculatus_F_contig1609:1..106Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 2..106 -
1622928075.8959002-CDS-E-fasciculatus_F_contig1609:539..7731622928075.8959002-CDS-E-fasciculatus_F_contig1609:539..773Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 540..773 -
1695995813.332203-CDS-E-fasciculatus_F_contig1609:539..7731695995813.332203-CDS-E-fasciculatus_F_contig1609:539..773Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 540..773 -
1622928075.9230375-CDS-E-fasciculatus_F_contig1609:1415..16041622928075.9230375-CDS-E-fasciculatus_F_contig1609:1415..1604Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 1416..1604 -
1695995813.340954-CDS-E-fasciculatus_F_contig1609:1415..16041695995813.340954-CDS-E-fasciculatus_F_contig1609:1415..1604Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 1416..1604 -
1622928075.9361968-CDS-E-fasciculatus_F_contig1609:1970..20961622928075.9361968-CDS-E-fasciculatus_F_contig1609:1970..2096Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 1971..2096 -
1695995813.3568048-CDS-E-fasciculatus_F_contig1609:1970..20961695995813.3568048-CDS-E-fasciculatus_F_contig1609:1970..2096Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 1971..2096 -
1622928075.9484303-CDS-E-fasciculatus_F_contig1609:2588..27171622928075.9484303-CDS-E-fasciculatus_F_contig1609:2588..2717Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 2589..2717 -
1695995813.3646812-CDS-E-fasciculatus_F_contig1609:2588..27171695995813.3646812-CDS-E-fasciculatus_F_contig1609:2588..2717Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 2589..2717 -
1622928075.962613-CDS-E-fasciculatus_F_contig1609:3696..39811622928075.962613-CDS-E-fasciculatus_F_contig1609:3696..3981Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 3697..3981 -
1695995813.373157-CDS-E-fasciculatus_F_contig1609:3696..39811695995813.373157-CDS-E-fasciculatus_F_contig1609:3696..3981Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 3697..3981 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928075.9759192-UTR-E-fasciculatus_F_contig1609:3981..41521622928075.9759192-UTR-E-fasciculatus_F_contig1609:3981..4152Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1609 3982..4152 -
1695995813.3814027-UTR-E-fasciculatus_F_contig1609:3981..41521695995813.3814027-UTR-E-fasciculatus_F_contig1609:3981..4152Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1609 3982..4152 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1609.4166.1prot_E-fasciculatus_F_contig1609.4166.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1609 2..3981 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1609.4166.1

>prot_E-fasciculatus_F_contig1609.4166.1 ID=prot_E-fasciculatus_F_contig1609.4166.1|Name=mRNA_E-fasciculatus_F_contig1609.4166.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=356bp
MGSRLGLAPSQLRLRCTRLVRRSSPRRAAAAAAAAAASPATSSARYSSTA
GPTTTGRQARKRGRKALGAVASVAAVAALLREAQLPDRFAEWDDQLQWEE
VHQLAQLSNMTHKDPRLVARWFDCHQYTGALVDRHLPQVSNHYFVHVGHL
PGEEHRRVHHVAIRGTVSLADLGIDLKTRQVFDAECGCMFHAGFKEVADA
VIEDLEAFLEPGAEVKLAGHSLGGAAAVIVAAKLKLRGHNIVKVMTFGAP
MVTDAAGAAILRDLLPVMRVTHERDPVPLTPLESGSLTSVAAVKLLPKPG
KGGGGGRQGDGDEVRPPSSRADSKVDEEGLIKGQRLQSGGEEGGEEAAEG
WETAGL
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mRNA from alignment at E-fasciculatus_F_contig1609:2..4152-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1609.4166.1 ID=mRNA_E-fasciculatus_F_contig1609.4166.1|Name=mRNA_E-fasciculatus_F_contig1609.4166.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4151bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1609:2..4152- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAAATGCCTTGCTTGGCTACACGCCAACAAGACAGGGGGAGAGGAGCCTG
CTGGTGCTGAGAGAGAGAGAGCCGCGACGTGCAACCGCCATCATTTCCCG
CTACTATTGTTGTGTTGGCAAGCCTATCTAGAAGCAGCGAGCGGGGACAC
ACCACAGGCAGGCTCTTCGCCATGGGGAGTCGATTAGGCCTCGCGCCTTC
CCAGCTTCGTCTCCGTTGCACAAGGCTGGTACGGCGGTCATCACCGAGAA
GGGCAGCAGCAGCAGCAGCAGCAGCGGCGGCCTCTCCTGCAACGAGTAGC
GCACGGTATTCGAGCACCGCCGGCCCTACTACTACAGGGAGGCAGGCGAG
GAAGAGGGGCAGGAAGGCGCTAGGAGCTGTGGCATCGGTGGCGGCCGTGG
CGGCGCTGCTGAGGGAGGCCCAGCTGCCGGACAGATTTGCAGAGTGGGAC
GATCAGGTAGGGTAGCAGACAAAGACAGACCAAGTTTTGAACGGGCGGCA
GGTTCGGATGCAACAACCATTGCCATTCTGTTTTCGATGCTGCCACAAGA
AGCGTAGCGGTACGTACAAACGTGCATCAATATAAGACTCATCATAAAGA
CTACAACGAAACACTTGGCAGCATTGCTCAATGAACAGCAGTTGTGCCTA
CACTGCTCTACGCATGTCGTCCGCAGTATGCTACAGCAGATGCTGTTGTC
CAACGTCACTATGTAGGGGCCGGGCACAACAATGTAGGGCCGGGATCGCC
GTCGTCAATCGATTGGTACCACCTGCCGTGTCAAGGTTGAAAGGTTTTTG
GTCGCTTCGCGTCACCGTCCAAATTAAGCGGCTCCAACTGAGCGGCTCCA
AGACAAAAGTCGATGTACATGAGACGTCAGAGTACTGCAGGCTGCACACT
GCTGTAGTCTAGATACGGATGCAGCAGCAGTGCATGTTCCTTTTTTTTGT
GGAACACGGCCGGTGTTGCGTTCCTACAAATCGCGAACGTCTCAGATAAA
ATGCCCCACCATTACGAACGTCGTCTCAGAGGTAATGCTACCATTGCGAA
CGTCTCAGATAACATACTACCTCGGCAGTAGTGTACTGCTGAAGAAATCA
TTCAGGAGGCATCCTTCTTCGTTGAGAGACATGGCTCGTTCGACAATATC
CTGGGAGGCGACGCACTTAACTCTTCTACCGTAAGTTAACTCCCGATTGT
TCTGAACGAAGGTCAACACATGATGTGCAAACCCCTCTATGTTCCTGAGT
CAATCTTATTTGTACACCCTTTACACACTGCGAAACAATTGAATGCCAGC
CGGAGCAACCGCGTTGCCGAATATCTCTCCTCCGAGAAACACGACAGACA
GCTCTGCAGGTGGCGTTTCAAGTGCTACATCTCCTGTGACAATTTCAATC
TCTCCTCTCCTCTTCGTTTGGAATGTTTATTGCAGCTGCAGTGGGAGGAG
GTGCACCAGCTAGCGCAGCTGTCCAACATGACCCACAAGGACCCCCGGCT
TGTCGCCAGGTGGTTCGACTGTCACCAGTACACCGGGGCCTTGGTTGATC
GGCATTTACCTCAGGTACTCCTACCATTACCATTCAGTCGTAAGACATAC
TATTGGTAGGCACACACTCGCGACGGATTGCGAAGCTCAAGACGTTCGTT
TACCGGAGGTGCTCTCAGCCTTCTGTTGCAGGCTGCGGCACCAGCTTTCG
TAGCGCAGGCCTTAGCGGCTCTGTCGGAAAGAAACACGATCCCGCTTTCC
TACTGGGTATAAACCCTTCCTACATACAGCTGAGTACCAATGCGATGACC
CGGCAGAGCGCATGGCGGGAAGTCACCGCGCGCGGTTGGTGTTTCTGGCG
CTAAGCGGCGTTGAAGGCTGAAGGGGTGTACCCGACGTTTGCCAATGCTT
TGCGCCACAAGGACAACAAAGATGAGCAGCGTAGAAATCCCGAACGCCTG
GTAGCAATTCGAGCTCGATGCCAACAACACCTCTCTCTCTTTGTTTCATG
TCGTACATATCCCCCGGACCCTCGCTACTGCTGTACATTGCCGCCTTGGT
CACCAGGTCTCCAACCACTACTTCGTTCACGTGGGGCACCTCCCAGGAGA
GGAGCATCGCCGGGTCCACCACGTGGCTATCCGAGGAACGGTTTCCTTAG
CGGACCTTGGCATCGACCTCAAGACACGCCAGGTGCGGTAGGCGAATGTC
ACACCCCCTGGGGGGGCGTACTCTTATGTTTTGCGTGCCTTAGTCGTTAG
ACCATTGACCACGCGTCCTCGACAAGACGGAGCGTTGTCCCCACAGGACC
GATCACCGTTGGCTACCAATCGTTACTTCCTTCTTATCACACACACACCC
TTGGGGGCGATTTTCAAAAGCACCAAGCCAGCGACAGTCCTCCACAAGCA
TGCATCGGCGAGGCTCGTCGGCAAGAACTGCGTCTACAGCCGTGATGTCA
TTCCAATACCTCGGTTTCCATAATTGGTCGCGCAATATGTGCATGCTTCT
ATTGCACGACTGTACCAAAAAAGTGCGGCTGAACCCCATTTTCTGCAGGT
TTTCGACGCGGAGTGCGGGTGCATGTTTCATGCGGGTTTCAAGGAGGTAG
CCGACGCGGTGATCGAAGATTTGGAGGCGTTCTTGGAGCCCGGGGCCGAG
GTGAAGCTGGCGGGGCACAGCCTGGGCGGGGCCGCGGCCGTCATAGTGGC
GGCGAAGCTGAAGCTGAGGGGGCACAACATTGTAAAGGTGGGTGCACTGC
CGTGTGCCAGACAGCGGTAGTGGGGGCTCCGGTGTGTGTGTCCGCCAGAT
TGTGCACCTGGGCGTCCGACTCTATTCACAGGATGAGACAAATTTTAGTA
TTCCGTCCGCTCATGCGGCTTCACCTGTGCCACGCCGAGCGGCTGGCACG
CGTGCCCAGAGTACGACCAACTGGTTGCAAGTGGTACGTTCGGTCTCGTT
GTGCAAAAGGAAAAATGTCGGAACTATGAGGCGATGACCTTGGGAGCTCT
GATTGCTACGGTTCTGGCCTCTCGCGACCAGATTACGACTTGCAAGTGAT
GCATGTCGGGCCGCGCCTCGTCAAAACGTGCGAGACAAGTGCTGGGGGAA
ATTGAGATGGTGGCTGTCTGCGCTCCGATGATTACCGTCTCTGACCTCGC
GCGACCAGGTTACGACTTAACAAGTGATCAAACACCACACACACGCACAC
ACACACACACACACACACACACTCCTTTGCGCCCCCCCCTGTCAGAACCC
TGTCGTTTGAAAGCTTGTTCGCGTTTTTTTACCCAGGAATGTACAAGACT
GACGTGATTTCATTGGTGAGCCGGTCAGCGCTAACACAAACAAAAACACA
CCCAACATGTCTCCGTGAAAAATAAAAAGGTGATGACGTTCGGGGCCCCC
ATGGTCACCGACGCCGCCGGCGCCGCGATTCTGCGGGACCTCCTTCCGGT
GATGAGGGTCACCCACGAGAGGGACCCCGTGCCGCTGACCCCTCTGGAGT
CGGGCTCTCTCACCTCGGTGGCGGCAGTCAAGCTTCTGCCTAAGCCCGGG
AAAGGTGGTGGCGGTGGCAGGCAGGGCGACGGCGACGAGGTGAGACCGCC
TTCTTCGCGAGCAGTGAAGTTTACAGTTTGCAGCAGTCGTGGATTTCGAT
GTAAGAGGGAACCTTATTAGAGGGGGCTCCGATATAAGGGGGTCGAACGT
GGGTCCGCTAATAAGTAGTATCGTTAGGTGCGTTCGTGGTCCGGTGTAAC
AGGGGTGTCCGATAGAAGAAGGTCGAGATTGGCTGTCACGGACCCGACCC
GATAGTAGTATAGTATGATGCCTTACCTTCGCATTCCGGTGTAAAGAGGG
GTGTCTAATATCAAGAGGGTCGAGGGCCTTTGTCACACCACCCTCTCTCA
TATCGGAGCCACGACTGTACGAGGAATCAGAGCAGGGGCGGGGTAATTGA
AGACTTCCCCGATTGCATGCTTTATCCAACTTCCCCGATTGCATGCTTTG
TCCAACATGTTTACTTAATGCAAAAAAAACTGCAAAGGTGCTGCAGGACA
GCAAGGTGGATGAGGAGGGGCTCATTAAAGGCCAGAGGTTGCAGAGTGGA
GGGGAAGAGGGGGGGGAGGAGGCGGCGGAGGGGTGGGAGACCGCGGGCTT
G
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1609:2..4152-

>mRNA_E-fasciculatus_F_contig1609.4166.1 ID=mRNA_E-fasciculatus_F_contig1609.4166.1|Name=mRNA_E-fasciculatus_F_contig1609.4166.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2136bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1609:2..4152- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGGGAGTCGATTAGGCCTCGCGCCTTCCCAGCTTCGTCTCCGTTGCAC
AAGGCTGGTACGGCGGTCATCACCGAGAAGGGCAGCAGCAGCAGCAGCAG
CAGCGGCGGCCTCTCCTGCAACGAGTAGCGCACGGTATTCGAGCACCGCC
GGCCCTACTACTACAGGGAGGCAGGCGAGGAAGAGGGGCAGGAAGGCGCT
AGGAGCTGTGGCATCGGTGGCGGCCGTGGCGGCGCTGCTGAGGGAGGCCC
AGCTGCCGGACAGATTTGCAGAGTGGGACGATCAGATGGGGAGTCGATTA
GGCCTCGCGCCTTCCCAGCTTCGTCTCCGTTGCACAAGGCTGGTACGGCG
GTCATCACCGAGAAGGGCAGCAGCAGCAGCAGCAGCAGCGGCGGCCTCTC
CTGCAACGAGTAGCGCACGGTATTCGAGCACCGCCGGCCCTACTACTACA
GGGAGGCAGGCGAGGAAGAGGGGCAGGAAGGCGCTAGGAGCTGTGGCATC
GGTGGCGGCCGTGGCGGCGCTGCTGAGGGAGGCCCAGCTGCCGGACAGAT
TTGCAGAGTGGGACGATCAGCTGCAGTGGGAGGAGGTGCACCAGCTAGCG
CAGCTGTCCAACATGACCCACAAGGACCCCCGGCTTGTCGCCAGGTGGTT
CGACTGTCACCAGTACACCGGGGCCTTGGTTGATCGGCATTTACCTCAGC
TGCAGTGGGAGGAGGTGCACCAGCTAGCGCAGCTGTCCAACATGACCCAC
AAGGACCCCCGGCTTGTCGCCAGGTGGTTCGACTGTCACCAGTACACCGG
GGCCTTGGTTGATCGGCATTTACCTCAGGTCTCCAACCACTACTTCGTTC
ACGTGGGGCACCTCCCAGGAGAGGAGCATCGCCGGGTCCACCACGTGGCT
ATCCGAGGAACGGTTTCCTTAGCGGACCTTGGCATCGACCTCAAGACACG
CCAGGTCTCCAACCACTACTTCGTTCACGTGGGGCACCTCCCAGGAGAGG
AGCATCGCCGGGTCCACCACGTGGCTATCCGAGGAACGGTTTCCTTAGCG
GACCTTGGCATCGACCTCAAGACACGCCAGGTTTTCGACGCGGAGTGCGG
GTGCATGTTTCATGCGGGTTTCAAGGAGGTAGCCGACGCGGTGATCGAAG
ATTTGGAGGCGTTCTTGGAGCCCGGGGCCGAGGTGAAGCTGGCGGGGCAC
AGCCTGGGCGGGGCCGCGGCCGTCATAGTGGCGGCGAAGCTGAAGCTGAG
GGGGCACAACATTGTAAAGGTTTTCGACGCGGAGTGCGGGTGCATGTTTC
ATGCGGGTTTCAAGGAGGTAGCCGACGCGGTGATCGAAGATTTGGAGGCG
TTCTTGGAGCCCGGGGCCGAGGTGAAGCTGGCGGGGCACAGCCTGGGCGG
GGCCGCGGCCGTCATAGTGGCGGCGAAGCTGAAGCTGAGGGGGCACAACA
TTGTAAAGGTGATGACGTTCGGGGCCCCCATGGTCACCGACGCCGCCGGC
GCCGCGATTCTGCGGGACCTCCTTCCGGTGATGAGGGTCACCCACGAGAG
GGACCCCGTGCCGCTGACCCCTCTGGAGTCGGGCTCTCTCACCTCGGTGG
CGGCAGTCAAGCTTCTGCCTAAGCCCGGGAAAGGTGGTGGCGGTGGCAGG
CAGGGCGACGGCGACGAGGTGAGACCGCCTTCTTCGCGAGCAGTGATGAC
GTTCGGGGCCCCCATGGTCACCGACGCCGCCGGCGCCGCGATTCTGCGGG
ACCTCCTTCCGGTGATGAGGGTCACCCACGAGAGGGACCCCGTGCCGCTG
ACCCCTCTGGAGTCGGGCTCTCTCACCTCGGTGGCGGCAGTCAAGCTTCT
GCCTAAGCCCGGGAAAGGTGGTGGCGGTGGCAGGCAGGGCGACGGCGACG
AGGTGAGACCGCCTTCTTCGCGAGCAGACAGCAAGGTGGATGAGGAGGGG
CTCATTAAAGGCCAGAGGTTGCAGAGTGGAGGGGAAGAGGGGGGGGAGGA
GGCGGCGGAGGGGTGGGAGACCGCGGGCTTGGACAGCAAGGTGGATGAGG
AGGGGCTCATTAAAGGCCAGAGGTTGCAGAGTGGAGGGGAAGAGGGGGGG
GAGGAGGCGGCGGAGGGGTGGGAGACCGCGGGCTTG
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