prot_E-fasciculatus_F_contig10515.412.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10515.412.1
Unique Nameprot_E-fasciculatus_F_contig10515.412.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length112
Homology
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BLAST of mRNA_E-fasciculatus_F_contig10515.412.1 vs. uniprot
Match: A0A6H5L1C0_9PHAE (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1C0_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 2.360e-21
Identity = 95/111 (85.59%), Postives = 97/111 (87.39%), Query Frame = 0 
Query:    1 MRVAVVSGAALRSLAVLGARQGRGRATVAFLAGAGRQQQPWTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMTSMSASSSAPEVLNEAAAGVCAEVI 111
            MRVAVVSGAALRSLAVLGA QGRGRATVAFLAGAGRQQQPWT+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          AM SMSASS+ PE LNEAAAGVCAEVI
Sbjct:    1 MRVAVVSGAALRSLAVLGAGQGRGRATVAFLAGAGRQQQPWTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGAVSAKQRAMASMSASST-PEELNEAAAGVCAEVI 110
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BLAST of mRNA_E-fasciculatus_F_contig10515.412.1 vs. uniprot
Match: D7FJP8_ECTSI (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP8_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 9.530e-14
Identity = 88/112 (78.57%), Postives = 90/112 (80.36%), Query Frame = 0 
Query:    1 MRVAVVSGAALRSLAVLGARQGRGRATVAFLAGAGRQQQPWTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMTSMSASSSAPEVLNEAAAGVCAEVIT 112
            MRVAVVSGAALRSLAVLGARQGRGRATVAFLAGAGRQQ+ WT+      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               NEAAAGVCAEVIT
Sbjct:    1 MRVAVVSGAALRSLAVLGARQGRGRATVAFLAGAGRQQRSWTTSALVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEAAAGVCAEVIT 112
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10515.412.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L1C0_9PHAE2.360e-2185.59Lactamase_B domain-containing protein n=1 Tax=Ecto... [more]
D7FJP8_ECTSI9.530e-1478.57Lactamase_B domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..112
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10515contigE-fasciculatus_F_contig10515:3452..4755 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10515.412.1mRNA_E-fasciculatus_F_contig10515.412.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10515 3452..4755 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10515.412.1 ID=prot_E-fasciculatus_F_contig10515.412.1|Name=mRNA_E-fasciculatus_F_contig10515.412.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=112bp
MRVAVVSGAALRSLAVLGARQGRGRATVAFLAGAGRQQQPWTSSALVAAT
GGSSSSSSTFGRKAASCGAASQAARGGAGSANQQAMTSMSASSSAPEVLN
EAAAGVCAEVIT
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