mRNA_E-fasciculatus_F_contig10512.410.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10512.410.1 vs. uniprot
Match: A0A6H5L6Y2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Y2_9PHAE) HSP 1 Score: 433 bits (1113), Expect = 1.790e-146 Identity = 234/267 (87.64%), Postives = 243/267 (91.01%), Query Frame = 2
Query: 329 EGSSRTAEEEAAEAMASRGESDAAAAQRAYRLLDAELTAXXXXXXXXXXXXXXTTASVATLSRSAAGALLSWIRCSTAGNGLIVADGGKAATSDTAERRELWGEHAPRVLQLVKESGEEPSTDPELQQIFTEAIMYSMATQGVVEAIVSGKALAFTSAMNVLVKKFPTQDNGVAFIFQGSYYLAAPWPLRSTKKALASYEKAVKVNGRSRRNVYYAGLGRLACGDKRGAAEMFRRAVSDDQCESASATERDIAVSLREQAQRGLDFC 1129
EGSS+TAE+EAAEAMASRGESD AAAQ AYRLLDAELTA T ASVATLSRSAAGALLSWIRCSTAGNGLIVADGGKAATSDT ERRELWG+HAPRVLQLVKESGEEPS+DPELQQIFTEA+MYS+ATQGVVEAIVSGKALAFTSAMNVLVKK+PTQDNGVAFIFQGSYYLAAPWPLRS KA SYEKAV VNGRSRRNVYYAGLGRLACGDKRGAAEMFRRAVSDDQCE+AS TERD+AVSLREQAQRGLDFC
Sbjct: 231 EGSSKTAEKEAAEAMASRGESDTAAAQHAYRLLDAELTAAAAASHDGPPP---TKASVATLSRSAAGALLSWIRCSTAGNGLIVADGGKAATSDTVERRELWGKHAPRVLQLVKESGEEPSSDPELQQIFTEAVMYSVATQGVVEAIVSGKALAFTSAMNVLVKKYPTQDNGVAFIFQGSYYLAAPWPLRSPTKARDSYEKAVNVNGRSRRNVYYAGLGRLACGDKRGAAEMFRRAVSDDQCENASPTERDVAVSLREQAQRGLDFC 494
BLAST of mRNA_E-fasciculatus_F_contig10512.410.1 vs. uniprot
Match: D8LSB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSB7_ECTSI) HSP 1 Score: 223 bits (568), Expect = 5.930e-69 Identity = 130/157 (82.80%), Postives = 136/157 (86.62%), Query Frame = 2
Query: 320 MPAEGSSRTAEEEAAEAMASRGESDAAAAQRAYRLLDAELTAXXXXXXXXXXXXXXTTASVATLS---RSAAGALLSWIRCSTAGNGLIVADGGKAATSDTAERRELWGEHAPRVLQLVKESGEEPSTDPELQQIFTEAIMYSMATQGVVEAIVSGK 781
MPA+GSS TAEEEAAEAMASRGESD AAAQRAYRLLDAELTA TTASVATLS RSAAGALLSWIRCSTAGNGLIVADGGK ATSDT ERRELWG+HAPRVLQLVKESGE+PS+DPELQQIFTEA+MYS+ATQGVVEAIVSGK
Sbjct: 1 MPADGSSNTAEEEAAEAMASRGESDTAAAQRAYRLLDAELTAAAATAVSHDGPPP-TTASVATLSTLSRSAAGALLSWIRCSTAGNGLIVADGGKVATSDTVERRELWGKHAPRVLQLVKESGEDPSSDPELQQIFTEAVMYSVATQGVVEAIVSGK 156
BLAST of mRNA_E-fasciculatus_F_contig10512.410.1 vs. uniprot
Match: A0A836CID7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CID7_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.330e-34 Identity = 66/134 (49.25%), Postives = 96/134 (71.64%), Query Frame = 2
Query: 536 LSWIRCSTAGNGLIVADGGKAATSDTAERRELWGEHAPRVLQLVKESGEEPSTDPELQQIFTEAIMYSMATQGVVEAIVSGKALAFTSAMNVLVKKFPTQDNGVAFIFQGSYYLAAPWPLRSTKKALASYEKAV 937
LSW+R T GNGL +T D+ R +W EHAP++L+L+ +S + D ++ Q +TEAIMY +++G++ I SG A AF +A+ +LV ++P QDNGVAFIFQG+YYLAAPWP++S KKA+A++EKA+
Sbjct: 112 LSWLRAKTDGNGLRH----DCSTVDSPPYRAIWAEHAPKILELLPQSAA-AAVDGDMAQAYTEAIMYKTSSKGIISGIASGNAFAFLNAVEMLVSQYPQQDNGVAFIFQGAYYLAAPWPVKSAKKAVAAFEKAL 240
BLAST of mRNA_E-fasciculatus_F_contig10512.410.1 vs. uniprot
Match: A0A7S2BPF7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BPF7_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 3.470e-15 Identity = 46/129 (35.66%), Postives = 74/129 (57.36%), Query Frame = 2
Query: 743 ATQGVVEAIVSGKALAFTSAMNVLVKKFPTQDNGVAFIFQGSYYLAAPWPLRSTKKALASYEKAVKVNGRSRRNVYYAGLGRLACGDKRGAAEMFRRAVSDDQCESASATERDIAVSLREQAQRGLDFC 1129
+++G++ SG A++ L T DNGVA+IF GS YLA P P++S KA + KA ++ S RN+Y++ L + G + AA++F+R++ + S ++RD+ LREQA+ GL C
Sbjct: 4 SSKGLIRVATSGDLPKLEKAVDDLRDIDETYDNGVAWIFAGSNYLALPRPIKSADKARVRFRKAQGISSDSPRNLYFSALAAMEAGSVKQAAKLFQRSLD---APAVSTSDRDLEAFLREQAKAGLAKC 129
BLAST of mRNA_E-fasciculatus_F_contig10512.410.1 vs. uniprot
Match: A0A1Q9DS85_SYMMI (Uncharacterized protein n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9DS85_SYMMI) HSP 1 Score: 82.0 bits (201), Expect = 5.600e-14 Identity = 54/206 (26.21%), Postives = 93/206 (45.15%), Query Frame = 2
Query: 503 ATLSRSAAGALLSWIRCSTAGNGLIVADGGKAATSDTAERRELWGEHAPRVLQLVKESGEEPSTDPELQQIFTEAIMYSMATQGVVEAIVSGKALAFTSAMNVLVKKFPTQDNGVAFIFQGSYYLAAPWPLRSTKKALASYEKAVKVNGRSRRNVYYAGLGRLACGDKRGAAEMFRRAVSDDQCESASATERDIAVSLREQAQRGL 1120
A L A AL +R T GN L++ + T D+ ++W E P + +P+ ++ +A Y + G++ ++G F + P ++ G+ FIF+G +Y+AAPWPLR K+AL +A+ + +RN YY GL + A + F ++ + +E D A L ++AQ G+
Sbjct: 73 ALLRLQLADALNCVMRIKTNGNMLLI-----SGTQDSQSNIKVWKEVGPEAWDNANRALAALPKNPQAASVYADAFQYMSSAHGILRQALTGGGREFLRNAQRMQAVGPDEEGGLGFIFEGCFYIAAPWPLRDLKRALGLMRRAL-AQKKCKRNYYYVGLANYHLQNYEEAIDYFAKSAD---AKPEFLSEFDFAAGLTQEAQHGI 269
BLAST of mRNA_E-fasciculatus_F_contig10512.410.1 vs. uniprot
Match: A0A7S2HMX9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HMX9_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 8.040e-12 Identity = 41/115 (35.65%), Postives = 65/115 (56.52%), Query Frame = 2
Query: 779 KALAFTSAMNVLVKKFPTQDNGVAFIFQGSYYLAAPWPLRSTKKALASYEKAVKVNGRSRRNVYYAGLGRLACGDKRGAAEMFRRAVS-DDQCESASATERDIAVSLREQAQRGL 1120
+A+AF A+ +++ FP D+GVAF+F+G++Y AAPWP+R+ K A ++KA+ S RN Y G+ D A F A+ C S+ T+ D+A + +A+ GL
Sbjct: 1 EAIAFKRAVRDMMQ-FPEWDDGVAFVFEGAFYAAAPWPVRNNKYACECFDKALAQQPLSSRNQYLRGVAAYDSNDYGTAKLKFEAAMEYKAPCSSSELTQVDVAAFVLREAKCGL 114
BLAST of mRNA_E-fasciculatus_F_contig10512.410.1 vs. uniprot
Match: A0A812PFR3_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812PFR3_9DINO) HSP 1 Score: 61.6 bits (148), Expect = 6.320e-8 Identity = 32/98 (32.65%), Postives = 53/98 (54.08%), Query Frame = 2
Query: 827 PTQDNGVAFIFQGSYYLAAPWPLRSTKKALASYEKAVKVNGRSRRNVYYAGLGRLACGDKRGAAEMFRRAVSDDQCESASATERDIAVSLREQAQRGL 1120
P ++ G+ FIF+G +Y+AAPWPLR +AL +A++ +RN YY GL + A + F ++ S + +E D A L ++A+ G+
Sbjct: 31 PDEEGGLGFIFEGCFYIAAPWPLRDLPRALGLMRRALERKA-CKRNYYYVGLANYHLQNYAEARDFFAKSAS---AKPEFLSEFDFAAGLTQEAEHGV 124 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10512.410.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10512.410.1 >prot_E-fasciculatus_F_contig10512.410.1 ID=prot_E-fasciculatus_F_contig10512.410.1|Name=mRNA_E-fasciculatus_F_contig10512.410.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=333bp MNVGYSLQLLLLYGRLQSLAIVFSFAPPYAAATGTAAVATPAAAAAAAGAback to top mRNA from alignment at E-fasciculatus_F_contig10512:821..3651- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10512.410.1 ID=mRNA_E-fasciculatus_F_contig10512.410.1|Name=mRNA_E-fasciculatus_F_contig10512.410.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2831bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10512:821..3651- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10512:821..3651- >mRNA_E-fasciculatus_F_contig10512.410.1 ID=mRNA_E-fasciculatus_F_contig10512.410.1|Name=mRNA_E-fasciculatus_F_contig10512.410.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1998bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10512:821..3651- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |