prot_E-fasciculatus_F_contig15987.4099.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15987.4099.1
Unique Nameprot_E-fasciculatus_F_contig15987.4099.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length49
Homology
BLAST of mRNA_E-fasciculatus_F_contig15987.4099.1 vs. uniprot
Match: D7FM85_ECTSI (KH_dom_type_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM85_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 4.610e-24
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0
Query:    3 QVAIPDHLVGVILGKGGATVIDMQNQTGARIQVSQRGEYIPGTTNR 48
            QVAIPDHLVGVILGKGGATVIDMQNQTGARIQVSQRGEYIPGTTNR
Sbjct:   11 QVAIPDHLVGVILGKGGATVIDMQNQTGARIQVSQRGEYIPGTTNR 56          
BLAST of mRNA_E-fasciculatus_F_contig15987.4099.1 vs. uniprot
Match: A0A6H5KV61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV61_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 2.200e-20
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0
Query:    3 QVAIPDHLVGVILGKGGATVIDMQNQTGARIQVSQRGEYIPGTTNR 48
            QVAIPDHLVGVILGK GATVIDMQNQTGARIQVSQRGEYIPGTTNR
Sbjct: 1058 QVAIPDHLVGVILGKRGATVIDMQNQTGARIQVSQRGEYIPGTTNR 1103          
BLAST of mRNA_E-fasciculatus_F_contig15987.4099.1 vs. uniprot
Match: U6DTT7_NEOVI (RNA-binding protein Nova-2 (Fragment) n=1 Tax=Neovison vison TaxID=452646 RepID=U6DTT7_NEOVI)

HSP 1 Score: 67.0 bits (162), Expect = 1.840e-13
Identity = 27/46 (58.70%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    3 QVAIPDHLVGVILGKGGATVIDMQNQTGARIQVSQRGEYIPGTTNR 48
            ++A+P++LVG ILGKGG T+++ Q  TGARIQ+S++GE++PGT NR
Sbjct:   28 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNR 73          
BLAST of mRNA_E-fasciculatus_F_contig15987.4099.1 vs. uniprot
Match: A0A8C3UUG3_CATUS (KH domain-containing protein n=2 Tax=Archelosauria TaxID=1329799 RepID=A0A8C3UUG3_CATUS)

HSP 1 Score: 67.4 bits (163), Expect = 3.170e-13
Identity = 27/46 (58.70%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    3 QVAIPDHLVGVILGKGGATVIDMQNQTGARIQVSQRGEYIPGTTNR 48
            ++A+P++LVG ILGKGG T+++ Q  TGARIQ+S++GE++PGT NR
Sbjct:   42 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNR 87          
BLAST of mRNA_E-fasciculatus_F_contig15987.4099.1 vs. uniprot
Match: UPI000695E587 (RNA-binding protein Nova-2 n=1 Tax=Chinchilla lanigera TaxID=34839 RepID=UPI000695E587)

HSP 1 Score: 67.0 bits (162), Expect = 3.980e-13
Identity = 27/46 (58.70%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    3 QVAIPDHLVGVILGKGGATVIDMQNQTGARIQVSQRGEYIPGTTNR 48
            ++A+P++LVG ILGKGG T+++ Q  TGARIQ+S++GE++PGT NR
Sbjct:   29 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNR 74          
BLAST of mRNA_E-fasciculatus_F_contig15987.4099.1 vs. uniprot
Match: A0A8C5RD50_LATLA (KH domain-containing protein n=1 Tax=Laticauda laticaudata TaxID=8630 RepID=A0A8C5RD50_LATLA)

HSP 1 Score: 67.4 bits (163), Expect = 4.820e-13
Identity = 27/46 (58.70%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    3 QVAIPDHLVGVILGKGGATVIDMQNQTGARIQVSQRGEYIPGTTNR 48
            ++A+P++LVG ILGKGG T+++ Q  TGARIQ+S++GE++PGT NR
Sbjct:   62 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNR 107          
BLAST of mRNA_E-fasciculatus_F_contig15987.4099.1 vs. uniprot
Match: A0A670XVA5_PSETE (KH domain-containing protein n=1 Tax=Pseudonaja textilis TaxID=8673 RepID=A0A670XVA5_PSETE)

HSP 1 Score: 67.4 bits (163), Expect = 7.580e-13
Identity = 27/46 (58.70%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    3 QVAIPDHLVGVILGKGGATVIDMQNQTGARIQVSQRGEYIPGTTNR 48
            ++A+P++LVG ILGKGG T+++ Q  TGARIQ+S++GE++PGT NR
Sbjct:   63 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNR 108          
BLAST of mRNA_E-fasciculatus_F_contig15987.4099.1 vs. uniprot
Match: A0A3Q3J843_MONAL (Uncharacterized protein n=1 Tax=Monopterus albus TaxID=43700 RepID=A0A3Q3J843_MONAL)

HSP 1 Score: 67.8 bits (164), Expect = 1.480e-12
Identity = 28/46 (60.87%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    3 QVAIPDHLVGVILGKGGATVIDMQNQTGARIQVSQRGEYIPGTTNR 48
            ++A+P++LVG ILGKGG T+++ Q  TGARIQ+S++GE+IPGT NR
Sbjct:   99 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNR 144          
BLAST of mRNA_E-fasciculatus_F_contig15987.4099.1 vs. uniprot
Match: A0A8C6YYB6_NOTPE (KH domain-containing protein n=1 Tax=Nothoprocta perdicaria TaxID=30464 RepID=A0A8C6YYB6_NOTPE)

HSP 1 Score: 67.4 bits (163), Expect = 1.720e-12
Identity = 27/46 (58.70%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    3 QVAIPDHLVGVILGKGGATVIDMQNQTGARIQVSQRGEYIPGTTNR 48
            ++A+P++LVG ILGKGG T+++ Q  TGARIQ+S++GE++PGT NR
Sbjct:   89 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNR 134          
BLAST of mRNA_E-fasciculatus_F_contig15987.4099.1 vs. uniprot
Match: A0A7S0GCT5_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GCT5_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.850e-12
Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 0
Query:    3 QVAIPDHLVGVILGKGGATVIDMQNQTGARIQVSQRGEYIPGTTNR 48
            QVA+PD L+G ILG+GGA + D+Q  +GARI++SQRGE IPGT NR
Sbjct:   33 QVAVPDQLIGGILGRGGAGINDLQMCSGARIKISQRGEVIPGTNNR 78          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15987.4099.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM85_ECTSI4.610e-24100.00KH_dom_type_1 domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KV61_9PHAE2.200e-2097.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
U6DTT7_NEOVI1.840e-1358.70RNA-binding protein Nova-2 (Fragment) n=1 Tax=Neov... [more]
A0A8C3UUG3_CATUS3.170e-1358.70KH domain-containing protein n=2 Tax=Archelosauria... [more]
UPI000695E5873.980e-1358.70RNA-binding protein Nova-2 n=1 Tax=Chinchilla lani... [more]
A0A8C5RD50_LATLA4.820e-1358.70KH domain-containing protein n=1 Tax=Laticauda lat... [more]
A0A670XVA5_PSETE7.580e-1358.70KH domain-containing protein n=1 Tax=Pseudonaja te... [more]
A0A3Q3J843_MONAL1.480e-1260.87Uncharacterized protein n=1 Tax=Monopterus albus T... [more]
A0A8C6YYB6_NOTPE1.720e-1258.70KH domain-containing protein n=1 Tax=Nothoprocta p... [more]
A0A7S0GCT5_9STRA1.850e-1265.22Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 1..48
e-value: 9.0E-15
score: 56.2
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 4..44
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 4..37
e-value: 4.5E-9
score: 36.0
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 3..48
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 1..48
score: 13.104
IPR033086RNA-binding protein Nova-1PANTHERPTHR10288:SF229RNA-BINDING PROTEIN NOVA-1coord: 3..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15987contigE-fasciculatus_F_contig15987:31..177 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15987.4099.1mRNA_E-fasciculatus_F_contig15987.4099.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15987 31..177 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15987.4099.1 ID=prot_E-fasciculatus_F_contig15987.4099.1|Name=mRNA_E-fasciculatus_F_contig15987.4099.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=49bp
VGQVAIPDHLVGVILGKGGATVIDMQNQTGARIQVSQRGEYIPGTTNR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033086NOVA1
IPR004088KH_dom_type_1
IPR036612KH_dom_type_1_sf