mRNA_E-fasciculatus_F_contig15979.4093.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig15979.4093.1
Unique NamemRNA_E-fasciculatus_F_contig15979.4093.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Match: D7FQ41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ41_ECTSI)

HSP 1 Score: 525 bits (1352), Expect = 2.440e-182
Identity = 264/270 (97.78%), Postives = 268/270 (99.26%), Query Frame = 1
Query:   52 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGVTHQHLESPALRGSLRMSPQQTGVMITGVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVISVTVPLSVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHEIEEGAGGLAHLLSTAEHGVRASNDEDIVILTQV 861
            YPVGGECISITAGVVSRVEMTVYAQAE+ELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDG+YLGFPRLG+THQHLESPALRGSLRMSPQQTGVMITGVQPT PAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSV+SVTVPL VSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHEIEEGAGGLAHLLSTAEHGVRASNDEDIVILTQV
Sbjct:  132 YPVGGECISITAGVVSRVEMTVYAQAEKELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGKYLGFPRLGITHQHLESPALRGSLRMSPQQTGVMITGVQPTCPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVMSVTVPLYVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHEIEEGAGGLAHLLSTAEHGVRASNDEDIVILTQV 401          
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Match: A0A6H5KXW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW0_9PHAE)

HSP 1 Score: 466 bits (1200), Expect = 2.640e-160
Identity = 238/270 (88.15%), Postives = 249/270 (92.22%), Query Frame = 1
Query:   52 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGVTHQHLESPALRGSLRMSPQQTGVMITGVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVISVTVPLSVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLE---HEIEEGAGGLAHLLSTAEHGVRASNDEDIVIL 852
            YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLG+THQHLESPALRGSLRMSPQQTGVM+T VQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSV+SVTVPLSVSD LCPVHFGGRAPSYFVLGGLVFTVMSAPYLE   HE+  G  G +++   + +G R  +   +V L
Sbjct:  140 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGITHQHLESPALRGSLRMSPQQTGVMVTCVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVMSVTVPLSVSDVLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEVLAHEVNVGYEGFSNMQLLSFNGERVKSLRHLVRL 409          
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Match: A0A835ZA79_9STRA (Trypsin-like cysteine/serine peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA79_9STRA)

HSP 1 Score: 360 bits (925), Expect = 1.160e-119
Identity = 189/274 (68.98%), Postives = 210/274 (76.64%), Query Frame = 1
Query:   52 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGVTHQHLESPALRGSLRMSPQ--QTGVMITGVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVISVTVPLSVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHEIE--EGAGGLAHLLSTAEHGVRASNDEDIVILTQV 861
            YPVGGECISITAGVVSRVEMTVYAQA  ELLS+QIDAAINPGNSGGPVVND GEVVGVAFQSL+G DVENIGYVVPVNVL+HFLEDVRRH G Y GFPRLG   Q LESP LR SLRM      TGV+++ V  T PA  VLR GDVI+ VDGI+VANDGS+PFR GERVAL+YY SQLF  D   V LLRD +  +VT PL V   LCP+HF G  P+Y V+GGLVFTV+S PYL   +E    A  L HL++ A  G RA  DE++VILTQV
Sbjct:  115 YPVGGECISITAGVVSRVEMTVYAQAGMELLSLQIDAAINPGNSGGPVVNDAGEVVGVAFQSLEGDDVENIGYVVPVNVLQHFLEDVRRHGGAYTGFPRLGAGLQFLESPTLRASLRMDDATGMTGVLVSDVDATAPAAAVLRPGDVILSVDGIQVANDGSVPFREGERVALRYYFSQLFRGDAVSVTLLRDGAAATVTAPLCVPGHLCPIHFDGAPPAYAVVGGLVFTVLSEPYLREALEAHRSAFALPHLVALAHFGKRARADEEVVILTQV 388          
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Match: A0A2R6XBW8_MARPO (PDZ domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XBW8_MARPO)

HSP 1 Score: 272 bits (695), Expect = 1.960e-83
Identity = 137/272 (50.37%), Postives = 188/272 (69.12%), Query Frame = 1
Query:   52 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGVTHQHLESPALRGSLRMSPQQTGVMITGVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVISVTVPLSVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHE--IEEGAGGLAHLLSTAEHGVRASNDEDIVILTQV 861
            YP+GGE IS+T+GVVSRVE+T YA    ELL++QIDAAINPGNSGGP  ++DGE VG+AFQS+D SD ENIGYV+P  V++HFL D  R +G+  GFP  G+  Q LE+ ALR +L+M+  Q GV+I  V+PT PA   L+ GDV+MK DG+ VAN+G++PF+AGER+A  +  SQ +  D  EVE+LR   V+++   L     L PVH  G+ PSY ++ GLVFTV+S P+LE    ++  +     +L  A +G+    DE +V+++QV
Sbjct:  282 YPIGGETISVTSGVVSRVEITSYAHGATELLAVQIDAAINPGNSGGPAFDEDGECVGIAFQSIDASDAENIGYVIPTPVIKHFLFDYER-NGKNTGFPSCGLVWQRLENSALRAALQMTNSQRGVLIRRVEPTSPASKALKAGDVLMKFDGVPVANEGTVPFQAGERIAFTFLASQKYSGDLVEVEVLRGGEVMTLQTALKAPTRLVPVHIDGKLPSYLIVAGLVFTVVSQPFLESHFGMDYDSNIPVKILEKATYGMAEFEDEQLVVVSQV 552          
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Match: A0A2K1K6G7_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K6G7_PHYPA)

HSP 1 Score: 271 bits (693), Expect = 2.450e-83
Identity = 133/272 (48.90%), Postives = 183/272 (67.28%), Query Frame = 1
Query:   52 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGVTHQHLESPALRGSLRMSPQQTGVMITGVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVISVTVPLSVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHEIEEGA--GGLAHLLSTAEHGVRASNDEDIVILTQV 861
            YP+GGE IS+T+GVVSR+E+T Y     ELL +QIDAAIN GNSGGPV +++GE VG+AFQSL G+D ENIGYV+P  V+ HFL D    +G+Y GFP +GV  Q LE+PALR  L+M P Q GV++  V+PT PA   +++GDV++  D I VAN+G++PFRAGER++  + +SQ F  D  + ++LRD  VI +   L     L PVH  G+ PSY ++ GLVFT +  PYLE E  +         +L  + HG+   +DE +V+++QV
Sbjct:  246 YPIGGESISVTSGVVSRIEVTSYVHGASELLGVQIDAAINAGNSGGPVFHENGECVGIAFQSLKGADAENIGYVIPTTVIHHFLSDYDT-NGKYTGFPSMGVLWQKLENPALRAFLKMKPDQKGVLVRRVEPTSPAFQAIKEGDVLLSFDNIPVANEGTVPFRAGERISFGFLISQKFSGDTAKCKMLRDGEVIEIETTLKAPVHLVPVHIEGKLPSYLIVAGLVFTPVCNPYLESEYGQDFEYDAPVKILEKSRHGMAEFDDEQLVVVSQV 516          
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Match: A0A4D9D0G7_9STRA (PDZ domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0G7_9STRA)

HSP 1 Score: 267 bits (682), Expect = 3.630e-82
Identity = 135/240 (56.25%), Postives = 170/240 (70.83%), Query Frame = 1
Query:   52 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGVTHQHLESPALRGSLRMSPQQTGVMITGVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVISVTVPLSVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHEIEE 771
            YPVGGE +S+TAGVVSR+E+  YAQ  + LL+IQIDAAIN GNSGGPV+ND  ++VGVAFQSL   D ENIGYV+PV++L HFL D+ RH G+Y GF RLGV  Q +ESPALR    +SP  +GV+IT V P  PA  +LRKGDV+M VDGI +ANDG+IPFR GERV L YY SQLF  D  ++++ R+     + VP  +       H     PSYF++GG+VFTV+S P+L   + E
Sbjct:  179 YPVGGESLSVTAGVVSRIELQEYAQGGETLLAIQIDAAINSGNSGGPVINDQDKLVGVAFQSLSSHDTENIGYVIPVDILLHFLADIERH-GQYTGFCRLGVKFQPMESPALRRHKALSPGASGVLITRVDPLAPAHGLLRKGDVLMGVDGISLANDGTIPFRKGERVELHYYFSQLFQGDTVQLQIWREGITQDIAVPAYIYKLAVRPHLNNEMPSYFMVGGMVFTVLSHPFLLSNLGE 417          
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Match: A9RGN6_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RGN6_PHYPA)

HSP 1 Score: 271 bits (693), Expect = 2.400e-81
Identity = 133/272 (48.90%), Postives = 183/272 (67.28%), Query Frame = 1
Query:   52 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGVTHQHLESPALRGSLRMSPQQTGVMITGVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVISVTVPLSVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHEIEEGA--GGLAHLLSTAEHGVRASNDEDIVILTQV 861
            YP+GGE IS+T+GVVSR+E+T Y     ELL +QIDAAIN GNSGGPV +++GE VG+AFQSL G+D ENIGYV+P  V+ HFL D    +G+Y GFP +GV  Q LE+PALR  L+M P Q GV++  V+PT PA   +++GDV++  D I VAN+G++PFRAGER++  + +SQ F  D  + ++LRD  VI +   L     L PVH  G+ PSY ++ GLVFT +  PYLE E  +         +L  + HG+   +DE +V+++QV
Sbjct:  479 YPIGGESISVTSGVVSRIEVTSYVHGASELLGVQIDAAINAGNSGGPVFHENGECVGIAFQSLKGADAENIGYVIPTTVIHHFLSDYDT-NGKYTGFPSMGVLWQKLENPALRAFLKMKPDQKGVLVRRVEPTSPAFQAIKEGDVLLSFDNIPVANEGTVPFRAGERISFGFLISQKFSGDTAKCKMLRDGEVIEIETTLKAPVHLVPVHIEGKLPSYLIVAGLVFTPVCNPYLESEYGQDFEYDAPVKILEKSRHGMAEFDDEQLVVVSQV 749          
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Match: D8TR21_VOLCA (PDZ_3 domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TR21_VOLCA)

HSP 1 Score: 262 bits (669), Expect = 4.260e-81
Identity = 133/272 (48.90%), Postives = 176/272 (64.71%), Query Frame = 1
Query:   52 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGVTHQHLESPALRGSLRMSPQQTGVMITGVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVISVTVPLSVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHEI--EEGAGGLAHLLSTAEHGVRASNDEDIVILTQV 861
            YP+GG+ +S+T+GVVSR+E+T Y     ELL IQIDAAIN GNSGGP  N+ GE VG+AFQSL   D ENIGY++P  V+EHFL D  RH G Y GFP LGV  Q LE+P LR +L+M P Q GV+I  V+PT     VL + DV+M  DG+ +ANDG++PFR+GER++  Y +S  + +++ E+ +L D    +V V L     L P H  G  PSYF++ GLVFT ++ PYL  E   E        LL    HG+ +  DE +V+L+QV
Sbjct:  118 YPIGGDTMSVTSGVVSRIEVTAYMHGSSELLGIQIDAAINSGNSGGPAFNEAGECVGIAFQSLKHEDAENIGYIIPTPVIEHFLTDYARH-GHYTGFPCLGVEWQKLENPDLRAALKMQPGQKGVLIRRVEPTSAVSEVLHQNDVLMSFDGVSIANDGTVPFRSGERISFSYLVSNKYTDEEAELVVLHDGQQRTVRVNLRAPVRLVPFHTRGAPPSYFIVAGLVFTTVTVPYLRSEYGKEYDFDAPVKLLDKMMHGMASHMDEQVVVLSQV 388          
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Match: A0A150GBQ6_GONPE (PDZ_3 domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GBQ6_GONPE)

HSP 1 Score: 265 bits (677), Expect = 7.940e-81
Identity = 134/272 (49.26%), Postives = 179/272 (65.81%), Query Frame = 1
Query:   52 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGVTHQHLESPALRGSLRMSPQQTGVMITGVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVISVTVPLSVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHEI--EEGAGGLAHLLSTAEHGVRASNDEDIVILTQV 861
            YP+GG+ +S+T+GVVSR+E+T Y     ELL IQIDAAIN GNSGGP  N+ GE VG+AFQSL   D ENIGY++P  V++HFL D  RH GRY GFP LGV  Q LE+P LR +L+M P Q GV+I  V+PT     VLR+ DV++  DG+ +ANDG++PFR+GER++  Y +S  + +++ E+ +L+D +  +V V L     L P H  G  PSYF+  GLVFT ++ PYL  E   E        LL    HG+ A  DE +V+L+QV
Sbjct:  231 YPIGGDTMSVTSGVVSRIEVTAYMHGSSELLGIQIDAAINSGNSGGPAFNEAGECVGIAFQSLKHEDAENIGYIIPTPVIQHFLTDYARH-GRYTGFPCLGVEWQKLENPDLRAALKMQPDQKGVLIRRVEPTSAVSEVLRQNDVLLSFDGVGIANDGTVPFRSGERISFSYLVSNKYTDEEAELVVLQDGAPRTVRVGLRAPVRLVPFHTRGLPPSYFICAGLVFTAVTVPYLRSEYGKEYDFDAPVKLLEKMMHGMAAKPDEQVVVLSQV 501          
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Match: A0A1Y1IJZ9_KLENI (HrtA/DegP protease n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IJZ9_KLENI)

HSP 1 Score: 265 bits (676), Expect = 1.700e-80
Identity = 135/272 (49.63%), Postives = 179/272 (65.81%), Query Frame = 1
Query:   52 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGVTHQHLESPALRGSLRMSPQQTGVMITGVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVISVTVPLSVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHEI--EEGAGGLAHLLSTAEHGVRASNDEDIVILTQV 861
            YP+GG+ IS+T+GVVSR+E+T Y     ELL +QIDAAIN GNSGGP  N  GE VG+AFQSL   D ENIGYV+P  V+ HFL D  R +G+Y GFP LG+  Q +ESPALR SL +   Q GV+I  ++PT  A NVL++GDVI+  DGI +ANDG++PFR+GER++  Y +SQ +  +   + + R    + V V L +   L PVH  G+ PSYF++ GLVFT +  PYLE E   +        LL    HG+  S+DE +V+L+QV
Sbjct:  282 YPIGGDTISVTSGVVSRIEVTSYVHGSTELLGVQIDAAINSGNSGGPAFNSRGECVGIAFQSLKSEDAENIGYVIPTPVINHFLTDFER-NGQYTGFPALGIAWQRMESPALRQSLGLRNDQKGVLIRRLEPTSFAYNVLKEGDVILSFDGIPIANDGTVPFRSGERISFGYLVSQKYTSETATLRVSRQGEEVDVDVRLRIPKRLVPVHIFGKNPSYFIIAGLVFTPVCQPYLESEYGSDYDYDTPVKLLDRMLHGMARSDDEQVVVLSQV 552          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ41_ECTSI2.440e-18297.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXW0_9PHAE2.640e-16088.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZA79_9STRA1.160e-11968.98Trypsin-like cysteine/serine peptidase domain-cont... [more]
A0A2R6XBW8_MARPO1.960e-8350.37PDZ domain-containing protein n=2 Tax=Marchantia p... [more]
A0A2K1K6G7_PHYPA2.450e-8348.90Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
A0A4D9D0G7_9STRA3.630e-8256.25PDZ domain-containing protein n=3 Tax=Monodopsidac... [more]
A9RGN6_PHYPA2.400e-8148.90Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
D8TR21_VOLCA4.260e-8148.90PDZ_3 domain-containing protein n=1 Tax=Volvox car... [more]
A0A150GBQ6_GONPE7.940e-8149.26PDZ_3 domain-containing protein n=1 Tax=Gonium pec... [more]
A0A1Y1IJZ9_KLENI1.700e-8049.63HrtA/DegP protease n=1 Tax=Klebsormidium nitens Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15979contigE-fasciculatus_F_contig15979:499..2650 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score525.8
Seed ortholog evalue1.3e-146
Seed eggNOG ortholog2880.D7FQ41
EggNOG free text desc.serine-type endopeptidase activity
EggNOG OGsCOG0265@1,KOG1320@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPDZ domain
Ec32 orthologEc-01_007570.1
Exons5
Model size861
Cds size861
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15979.4093.1prot_E-fasciculatus_F_contig15979.4093.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig15979 499..2650 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928065.44978-CDS-E-fasciculatus_F_contig15979:498..7641622928065.44978-CDS-E-fasciculatus_F_contig15979:498..764Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15979 499..764 +
1695995808.807823-CDS-E-fasciculatus_F_contig15979:498..7641695995808.807823-CDS-E-fasciculatus_F_contig15979:498..764Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15979 499..764 +
1622928065.4694424-CDS-E-fasciculatus_F_contig15979:1284..14621622928065.4694424-CDS-E-fasciculatus_F_contig15979:1284..1462Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15979 1285..1462 +
1695995808.817357-CDS-E-fasciculatus_F_contig15979:1284..14621695995808.817357-CDS-E-fasciculatus_F_contig15979:1284..1462Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15979 1285..1462 +
1622928065.490515-CDS-E-fasciculatus_F_contig15979:1781..19341622928065.490515-CDS-E-fasciculatus_F_contig15979:1781..1934Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15979 1782..1934 +
1695995808.8265488-CDS-E-fasciculatus_F_contig15979:1781..19341695995808.8265488-CDS-E-fasciculatus_F_contig15979:1781..1934Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15979 1782..1934 +
1622928065.5327504-CDS-E-fasciculatus_F_contig15979:2171..23301622928065.5327504-CDS-E-fasciculatus_F_contig15979:2171..2330Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15979 2172..2330 +
1695995808.8354065-CDS-E-fasciculatus_F_contig15979:2171..23301695995808.8354065-CDS-E-fasciculatus_F_contig15979:2171..2330Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15979 2172..2330 +
1622928065.5483973-CDS-E-fasciculatus_F_contig15979:2545..26501622928065.5483973-CDS-E-fasciculatus_F_contig15979:2545..2650Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15979 2546..2650 +
1695995808.8469646-CDS-E-fasciculatus_F_contig15979:2545..26501695995808.8469646-CDS-E-fasciculatus_F_contig15979:2545..2650Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15979 2546..2650 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig15979.4093.1

>prot_E-fasciculatus_F_contig15979.4093.1 ID=prot_E-fasciculatus_F_contig15979.4093.1|Name=mRNA_E-fasciculatus_F_contig15979.4093.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=287bp
MTKKTHTNNDDDDDDDSYPVGGECISITAGVVSRVEMTVYAQAEQELLSI
QIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHF
LEDVRRHDGRYLGFPRLGVTHQHLESPALRGSLRMSPQQTGVMITGVQPT
YPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKT
EVELLRDDSVISVTVPLSVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPY
LEHEIEEGAGGLAHLLSTAEHGVRASNDEDIVILTQV
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mRNA from alignment at E-fasciculatus_F_contig15979:499..2650+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig15979.4093.1 ID=mRNA_E-fasciculatus_F_contig15979.4093.1|Name=mRNA_E-fasciculatus_F_contig15979.4093.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2152bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15979:499..2650+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGACGAAAAAAACACACACCAACAACGACGACGACGACGACGACGACAG CTATCCGGTTGGAGGAGAATGCATCTCCATCACAGCTGGAGTGGTGAGCC GTGTGGAGATGACGGTCTACGCCCAGGCAGAGCAGGAGCTGCTGTCGATC CAGATCGACGCCGCGATTAACCCAGGGAACAGCGGGGGGCCCGTGGTGAA CGACGACGGGGAGGTGGTGGGGGTGGCGTTTCAGAGCCTGGACGGCAGCG ACGTTGAGAACATCGGGTGTGTGTGGTTTCCTATCCTAATTAGTGTCGAC TACGCCAACAGGCTGACCAATGGAAAGACGCTGGTCTTGTAGCGGGGTAA ACAACACCAACACTGCTGTGCGTGTGTTTTTTTGTTTTTTACTGTTCCAT GCTCTTCGTCGACGTGGTTTGTGTATAGTTTATTTCATCTTGGATCTTTG CGTTTTCGTTTTTGTTGTTGTTGTCTGGCTTAGCGTTGCTTGCGGTCGGG GATTATGCGTTTGTTTTCGGCGCCAGCGAGGATCTGTCGTTGATACTGCC CACTGCTGCTGATGTTGTGGTCGTGTACTCTAAGCAAGAAACACCCTGTC GCACGGGGAGATTGGTTTCCCGATCTGGAGAAGCAGGACAGATTTGACGT AGCGTTGGGCTATTTCAGTACCCGCAACCTCGAAGAAACATTCGACCAAA TTCAGTGCATGTCGGTGCCACTTGCTCCCTAACGCTGCGCCGCCGCCGCC GCCGCCGCCGCCGCCGGCTTTCTCGCTGCCCGACAGGTACGTGGTTCCGG TCAACGTCCTGGAGCACTTTCTTGAGGACGTCCGCCGCCACGACGGCAGG TACCTCGGCTTCCCGCGCCTGGGCGTCACCCACCAGCACCTAGAGAGCCC GGCCCTTAGGGGAAGCCTGAGGATGTCTCCGCAGCAGACGGGCGTCATGA TCACAGGCGTGCAGGTGCGGAAATGAGTCACACAGCGTGAGTGCAGTGCA GTGGTTACACGCACGTATTCTTGACACACCTAGCGGTTTTTGTTCGTGCT CACGCCCAGAGTGTCGTTTTTCGTCAGGTCGCGGGTGGGTGTGTGACGAA CCCTGCGCCCGCGGGGCTGATTTCAAGGACCTCGCTTTACCCCGGAACAA CGCATTTGCTCTTGGACATGACGGGTTCTAAGACGACTCGTCGGTGATCG TATGTGTGCGACATGTTTTGCTTTCAGAATTAGGTCGAAGCTCATGGCTC TTTCCGCGCCCCACCCACCCCACGGTCTTGCAGCCCACGTATCCGGCGGT GAACGTTCTTCGTAAGGGTGACGTGATCATGAAGGTGGACGGTATCAGGG TGGCGAACGACGGGAGCATTCCCTTCCGCGCCGGGGAGCGGGTGGCGTTG AAATACTACATGTCTCAGCTTTTCCCGGAGGACAAGGTGGGCACAGCTGC TGGAACCCTGTCAAAAGACGGGGGGCCAGTGCTGCTGCAGTGCAGGGAGG GAGAAAATAGTTTGGCATAGGGAAGGCGTTGTATTGTTCTTGTTTCGCCC GCGAAAGATTCGAGAATCTGAATGATCGCCCCCCGCCCCGTCCCCAACCA CCACAACTGCCACCCATCTATATCTTTCTCGCGGCTGTCAACATGAACTC CACCTGCTATCTGGATGGAGCAGACAGAGGTGGAGCTATTGAGAGACGAC AGCGTGATATCCGTGACGGTCCCGCTGTCCGTGTCTGACTTTTTGTGCCC CGTGCACTTCGGCGGGCGGGCGCCGAGCTACTTCGTCCTCGGGGGGCTGG TATTCACCGTCATGAGCGCGCCGTACCTCGAGGTAAGACCGGCTTTCTGC TTTCTCCCGTTTGCGTGTCGCGTCCAGAGAGAAGTTTGTGAGTTTTTCTA CAGCACTGGTCGTGCGTTTTTGTTTTTGTCTTGATTGCATTTGCTTCGTG GGTCAGGTTGTTTTGCATGCGATCGTCAACCCTCTCTTGACTTGCTTCTT CTTTGTCGTGCTCCCTTTCTCTTCCTCTTTTGCTTTCATCTCGCTAGCAC GAAATAGAGGAAGGAGCGGGTGGTCTAGCGCACTTGCTGTCAACAGCGGA GCACGGCGTGAGGGCTAGCAACGATGAGGATATTGTCATCCTTACCCAGG TG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15979:499..2650+

>mRNA_E-fasciculatus_F_contig15979.4093.1 ID=mRNA_E-fasciculatus_F_contig15979.4093.1|Name=mRNA_E-fasciculatus_F_contig15979.4093.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1722bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15979:499..2650+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGACGAAAAAAACACACACCAACAACGACGACGACGACGACGACGACAG
CTATCCGGTTGGAGGAGAATGCATCTCCATCACAGCTGGAGTGGTGAGCC
GTGTGGAGATGACGGTCTACGCCCAGGCAGAGCAGGAGCTGCTGTCGATC
CAGATCGACGCCGCGATTAACCCAGGGAACAGCGGGGGGCCCGTGGTGAA
CGACGACGGGGAGGTGGTGGGGGTGGCGTTTCAGAGCCTGGACGGCAGCG
ACGTTGAGAACATCGGATGACGAAAAAAACACACACCAACAACGACGACG
ACGACGACGACGACAGCTATCCGGTTGGAGGAGAATGCATCTCCATCACA
GCTGGAGTGGTGAGCCGTGTGGAGATGACGGTCTACGCCCAGGCAGAGCA
GGAGCTGCTGTCGATCCAGATCGACGCCGCGATTAACCCAGGGAACAGCG
GGGGGCCCGTGGTGAACGACGACGGGGAGGTGGTGGGGGTGGCGTTTCAG
AGCCTGGACGGCAGCGACGTTGAGAACATCGGGTACGTGGTTCCGGTCAA
CGTCCTGGAGCACTTTCTTGAGGACGTCCGCCGCCACGACGGCAGGTACC
TCGGCTTCCCGCGCCTGGGCGTCACCCACCAGCACCTAGAGAGCCCGGCC
CTTAGGGGAAGCCTGAGGATGTCTCCGCAGCAGACGGGCGTCATGATCAC
AGGCGTGCAGGTACGTGGTTCCGGTCAACGTCCTGGAGCACTTTCTTGAG
GACGTCCGCCGCCACGACGGCAGGTACCTCGGCTTCCCGCGCCTGGGCGT
CACCCACCAGCACCTAGAGAGCCCGGCCCTTAGGGGAAGCCTGAGGATGT
CTCCGCAGCAGACGGGCGTCATGATCACAGGCGTGCAGCCCACGTATCCG
GCGGTGAACGTTCTTCGTAAGGGTGACGTGATCATGAAGGTGGACGGTAT
CAGGGTGGCGAACGACGGGAGCATTCCCTTCCGCGCCGGGGAGCGGGTGG
CGTTGAAATACTACATGTCTCAGCTTTTCCCGGAGGACAAGCCCACGTAT
CCGGCGGTGAACGTTCTTCGTAAGGGTGACGTGATCATGAAGGTGGACGG
TATCAGGGTGGCGAACGACGGGAGCATTCCCTTCCGCGCCGGGGAGCGGG
TGGCGTTGAAATACTACATGTCTCAGCTTTTCCCGGAGGACAAGACAGAG
GTGGAGCTATTGAGAGACGACAGCGTGATATCCGTGACGGTCCCGCTGTC
CGTGTCTGACTTTTTGTGCCCCGTGCACTTCGGCGGGCGGGCGCCGAGCT
ACTTCGTCCTCGGGGGGCTGGTATTCACCGTCATGAGCGCGCCGTACCTC
GAGACAGAGGTGGAGCTATTGAGAGACGACAGCGTGATATCCGTGACGGT
CCCGCTGTCCGTGTCTGACTTTTTGTGCCCCGTGCACTTCGGCGGGCGGG
CGCCGAGCTACTTCGTCCTCGGGGGGCTGGTATTCACCGTCATGAGCGCG
CCGTACCTCGAGCACGAAATAGAGGAAGGAGCGGGTGGTCTAGCGCACTT
GCTGTCAACAGCGGAGCACGGCGTGAGGGCTAGCAACGATGAGGATATTG
TCATCCTTACCCAGGTGCACGAAATAGAGGAAGGAGCGGGTGGTCTAGCG
CACTTGCTGTCAACAGCGGAGCACGGCGTGAGGGCTAGCAACGATGAGGA
TATTGTCATCCTTACCCAGGTG
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