mRNA_E-fasciculatus_F_contig15979.4093.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Match: D7FQ41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ41_ECTSI) HSP 1 Score: 525 bits (1352), Expect = 2.440e-182 Identity = 264/270 (97.78%), Postives = 268/270 (99.26%), Query Frame = 1
Query: 52 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGVTHQHLESPALRGSLRMSPQQTGVMITGVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVISVTVPLSVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHEIEEGAGGLAHLLSTAEHGVRASNDEDIVILTQV 861
YPVGGECISITAGVVSRVEMTVYAQAE+ELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDG+YLGFPRLG+THQHLESPALRGSLRMSPQQTGVMITGVQPT PAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSV+SVTVPL VSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHEIEEGAGGLAHLLSTAEHGVRASNDEDIVILTQV
Sbjct: 132 YPVGGECISITAGVVSRVEMTVYAQAEKELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGKYLGFPRLGITHQHLESPALRGSLRMSPQQTGVMITGVQPTCPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVMSVTVPLYVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHEIEEGAGGLAHLLSTAEHGVRASNDEDIVILTQV 401
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Match: A0A6H5KXW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW0_9PHAE) HSP 1 Score: 466 bits (1200), Expect = 2.640e-160 Identity = 238/270 (88.15%), Postives = 249/270 (92.22%), Query Frame = 1
Query: 52 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGVTHQHLESPALRGSLRMSPQQTGVMITGVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVISVTVPLSVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLE---HEIEEGAGGLAHLLSTAEHGVRASNDEDIVIL 852
YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLG+THQHLESPALRGSLRMSPQQTGVM+T VQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSV+SVTVPLSVSD LCPVHFGGRAPSYFVLGGLVFTVMSAPYLE HE+ G G +++ + +G R + +V L
Sbjct: 140 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGITHQHLESPALRGSLRMSPQQTGVMVTCVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVMSVTVPLSVSDVLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEVLAHEVNVGYEGFSNMQLLSFNGERVKSLRHLVRL 409
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Match: A0A835ZA79_9STRA (Trypsin-like cysteine/serine peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA79_9STRA) HSP 1 Score: 360 bits (925), Expect = 1.160e-119 Identity = 189/274 (68.98%), Postives = 210/274 (76.64%), Query Frame = 1
Query: 52 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGVTHQHLESPALRGSLRMSPQ--QTGVMITGVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVISVTVPLSVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHEIE--EGAGGLAHLLSTAEHGVRASNDEDIVILTQV 861
YPVGGECISITAGVVSRVEMTVYAQA ELLS+QIDAAINPGNSGGPVVND GEVVGVAFQSL+G DVENIGYVVPVNVL+HFLEDVRRH G Y GFPRLG Q LESP LR SLRM TGV+++ V T PA VLR GDVI+ VDGI+VANDGS+PFR GERVAL+YY SQLF D V LLRD + +VT PL V LCP+HF G P+Y V+GGLVFTV+S PYL +E A L HL++ A G RA DE++VILTQV
Sbjct: 115 YPVGGECISITAGVVSRVEMTVYAQAGMELLSLQIDAAINPGNSGGPVVNDAGEVVGVAFQSLEGDDVENIGYVVPVNVLQHFLEDVRRHGGAYTGFPRLGAGLQFLESPTLRASLRMDDATGMTGVLVSDVDATAPAAAVLRPGDVILSVDGIQVANDGSVPFREGERVALRYYFSQLFRGDAVSVTLLRDGAAATVTAPLCVPGHLCPIHFDGAPPAYAVVGGLVFTVLSEPYLREALEAHRSAFALPHLVALAHFGKRARADEEVVILTQV 388
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Match: A0A2R6XBW8_MARPO (PDZ domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XBW8_MARPO) HSP 1 Score: 272 bits (695), Expect = 1.960e-83 Identity = 137/272 (50.37%), Postives = 188/272 (69.12%), Query Frame = 1
Query: 52 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGVTHQHLESPALRGSLRMSPQQTGVMITGVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVISVTVPLSVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHE--IEEGAGGLAHLLSTAEHGVRASNDEDIVILTQV 861
YP+GGE IS+T+GVVSRVE+T YA ELL++QIDAAINPGNSGGP ++DGE VG+AFQS+D SD ENIGYV+P V++HFL D R +G+ GFP G+ Q LE+ ALR +L+M+ Q GV+I V+PT PA L+ GDV+MK DG+ VAN+G++PF+AGER+A + SQ + D EVE+LR V+++ L L PVH G+ PSY ++ GLVFTV+S P+LE ++ + +L A +G+ DE +V+++QV
Sbjct: 282 YPIGGETISVTSGVVSRVEITSYAHGATELLAVQIDAAINPGNSGGPAFDEDGECVGIAFQSIDASDAENIGYVIPTPVIKHFLFDYER-NGKNTGFPSCGLVWQRLENSALRAALQMTNSQRGVLIRRVEPTSPASKALKAGDVLMKFDGVPVANEGTVPFQAGERIAFTFLASQKYSGDLVEVEVLRGGEVMTLQTALKAPTRLVPVHIDGKLPSYLIVAGLVFTVVSQPFLESHFGMDYDSNIPVKILEKATYGMAEFEDEQLVVVSQV 552
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Match: A0A2K1K6G7_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K6G7_PHYPA) HSP 1 Score: 271 bits (693), Expect = 2.450e-83 Identity = 133/272 (48.90%), Postives = 183/272 (67.28%), Query Frame = 1
Query: 52 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGVTHQHLESPALRGSLRMSPQQTGVMITGVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVISVTVPLSVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHEIEEGA--GGLAHLLSTAEHGVRASNDEDIVILTQV 861
YP+GGE IS+T+GVVSR+E+T Y ELL +QIDAAIN GNSGGPV +++GE VG+AFQSL G+D ENIGYV+P V+ HFL D +G+Y GFP +GV Q LE+PALR L+M P Q GV++ V+PT PA +++GDV++ D I VAN+G++PFRAGER++ + +SQ F D + ++LRD VI + L L PVH G+ PSY ++ GLVFT + PYLE E + +L + HG+ +DE +V+++QV
Sbjct: 246 YPIGGESISVTSGVVSRIEVTSYVHGASELLGVQIDAAINAGNSGGPVFHENGECVGIAFQSLKGADAENIGYVIPTTVIHHFLSDYDT-NGKYTGFPSMGVLWQKLENPALRAFLKMKPDQKGVLVRRVEPTSPAFQAIKEGDVLLSFDNIPVANEGTVPFRAGERISFGFLISQKFSGDTAKCKMLRDGEVIEIETTLKAPVHLVPVHIEGKLPSYLIVAGLVFTPVCNPYLESEYGQDFEYDAPVKILEKSRHGMAEFDDEQLVVVSQV 516
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Match: A0A4D9D0G7_9STRA (PDZ domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0G7_9STRA) HSP 1 Score: 267 bits (682), Expect = 3.630e-82 Identity = 135/240 (56.25%), Postives = 170/240 (70.83%), Query Frame = 1
Query: 52 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGVTHQHLESPALRGSLRMSPQQTGVMITGVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVISVTVPLSVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHEIEE 771
YPVGGE +S+TAGVVSR+E+ YAQ + LL+IQIDAAIN GNSGGPV+ND ++VGVAFQSL D ENIGYV+PV++L HFL D+ RH G+Y GF RLGV Q +ESPALR +SP +GV+IT V P PA +LRKGDV+M VDGI +ANDG+IPFR GERV L YY SQLF D ++++ R+ + VP + H PSYF++GG+VFTV+S P+L + E
Sbjct: 179 YPVGGESLSVTAGVVSRIELQEYAQGGETLLAIQIDAAINSGNSGGPVINDQDKLVGVAFQSLSSHDTENIGYVIPVDILLHFLADIERH-GQYTGFCRLGVKFQPMESPALRRHKALSPGASGVLITRVDPLAPAHGLLRKGDVLMGVDGISLANDGTIPFRKGERVELHYYFSQLFQGDTVQLQIWREGITQDIAVPAYIYKLAVRPHLNNEMPSYFMVGGMVFTVLSHPFLLSNLGE 417
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Match: A9RGN6_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RGN6_PHYPA) HSP 1 Score: 271 bits (693), Expect = 2.400e-81 Identity = 133/272 (48.90%), Postives = 183/272 (67.28%), Query Frame = 1
Query: 52 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGVTHQHLESPALRGSLRMSPQQTGVMITGVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVISVTVPLSVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHEIEEGA--GGLAHLLSTAEHGVRASNDEDIVILTQV 861
YP+GGE IS+T+GVVSR+E+T Y ELL +QIDAAIN GNSGGPV +++GE VG+AFQSL G+D ENIGYV+P V+ HFL D +G+Y GFP +GV Q LE+PALR L+M P Q GV++ V+PT PA +++GDV++ D I VAN+G++PFRAGER++ + +SQ F D + ++LRD VI + L L PVH G+ PSY ++ GLVFT + PYLE E + +L + HG+ +DE +V+++QV
Sbjct: 479 YPIGGESISVTSGVVSRIEVTSYVHGASELLGVQIDAAINAGNSGGPVFHENGECVGIAFQSLKGADAENIGYVIPTTVIHHFLSDYDT-NGKYTGFPSMGVLWQKLENPALRAFLKMKPDQKGVLVRRVEPTSPAFQAIKEGDVLLSFDNIPVANEGTVPFRAGERISFGFLISQKFSGDTAKCKMLRDGEVIEIETTLKAPVHLVPVHIEGKLPSYLIVAGLVFTPVCNPYLESEYGQDFEYDAPVKILEKSRHGMAEFDDEQLVVVSQV 749
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Match: D8TR21_VOLCA (PDZ_3 domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TR21_VOLCA) HSP 1 Score: 262 bits (669), Expect = 4.260e-81 Identity = 133/272 (48.90%), Postives = 176/272 (64.71%), Query Frame = 1
Query: 52 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGVTHQHLESPALRGSLRMSPQQTGVMITGVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVISVTVPLSVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHEI--EEGAGGLAHLLSTAEHGVRASNDEDIVILTQV 861
YP+GG+ +S+T+GVVSR+E+T Y ELL IQIDAAIN GNSGGP N+ GE VG+AFQSL D ENIGY++P V+EHFL D RH G Y GFP LGV Q LE+P LR +L+M P Q GV+I V+PT VL + DV+M DG+ +ANDG++PFR+GER++ Y +S + +++ E+ +L D +V V L L P H G PSYF++ GLVFT ++ PYL E E LL HG+ + DE +V+L+QV
Sbjct: 118 YPIGGDTMSVTSGVVSRIEVTAYMHGSSELLGIQIDAAINSGNSGGPAFNEAGECVGIAFQSLKHEDAENIGYIIPTPVIEHFLTDYARH-GHYTGFPCLGVEWQKLENPDLRAALKMQPGQKGVLIRRVEPTSAVSEVLHQNDVLMSFDGVSIANDGTVPFRSGERISFSYLVSNKYTDEEAELVVLHDGQQRTVRVNLRAPVRLVPFHTRGAPPSYFIVAGLVFTTVTVPYLRSEYGKEYDFDAPVKLLDKMMHGMASHMDEQVVVLSQV 388
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Match: A0A150GBQ6_GONPE (PDZ_3 domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GBQ6_GONPE) HSP 1 Score: 265 bits (677), Expect = 7.940e-81 Identity = 134/272 (49.26%), Postives = 179/272 (65.81%), Query Frame = 1
Query: 52 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGVTHQHLESPALRGSLRMSPQQTGVMITGVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVISVTVPLSVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHEI--EEGAGGLAHLLSTAEHGVRASNDEDIVILTQV 861
YP+GG+ +S+T+GVVSR+E+T Y ELL IQIDAAIN GNSGGP N+ GE VG+AFQSL D ENIGY++P V++HFL D RH GRY GFP LGV Q LE+P LR +L+M P Q GV+I V+PT VLR+ DV++ DG+ +ANDG++PFR+GER++ Y +S + +++ E+ +L+D + +V V L L P H G PSYF+ GLVFT ++ PYL E E LL HG+ A DE +V+L+QV
Sbjct: 231 YPIGGDTMSVTSGVVSRIEVTAYMHGSSELLGIQIDAAINSGNSGGPAFNEAGECVGIAFQSLKHEDAENIGYIIPTPVIQHFLTDYARH-GRYTGFPCLGVEWQKLENPDLRAALKMQPDQKGVLIRRVEPTSAVSEVLRQNDVLLSFDGVGIANDGTVPFRSGERISFSYLVSNKYTDEEAELVVLQDGAPRTVRVGLRAPVRLVPFHTRGLPPSYFICAGLVFTAVTVPYLRSEYGKEYDFDAPVKLLEKMMHGMAAKPDEQVVVLSQV 501
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Match: A0A1Y1IJZ9_KLENI (HrtA/DegP protease n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IJZ9_KLENI) HSP 1 Score: 265 bits (676), Expect = 1.700e-80 Identity = 135/272 (49.63%), Postives = 179/272 (65.81%), Query Frame = 1
Query: 52 YPVGGECISITAGVVSRVEMTVYAQAEQELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVENIGYVVPVNVLEHFLEDVRRHDGRYLGFPRLGVTHQHLESPALRGSLRMSPQQTGVMITGVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVISVTVPLSVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHEI--EEGAGGLAHLLSTAEHGVRASNDEDIVILTQV 861
YP+GG+ IS+T+GVVSR+E+T Y ELL +QIDAAIN GNSGGP N GE VG+AFQSL D ENIGYV+P V+ HFL D R +G+Y GFP LG+ Q +ESPALR SL + Q GV+I ++PT A NVL++GDVI+ DGI +ANDG++PFR+GER++ Y +SQ + + + + R + V V L + L PVH G+ PSYF++ GLVFT + PYLE E + LL HG+ S+DE +V+L+QV
Sbjct: 282 YPIGGDTISVTSGVVSRIEVTSYVHGSTELLGVQIDAAINSGNSGGPAFNSRGECVGIAFQSLKSEDAENIGYVIPTPVINHFLTDFER-NGQYTGFPALGIAWQRMESPALRQSLGLRNDQKGVLIRRLEPTSFAYNVLKEGDVILSFDGIPIANDGTVPFRSGERISFGYLVSQKYTSETATLRVSRQGEEVDVDVRLRIPKRLVPVHIFGKNPSYFIIAGLVFTPVCQPYLESEYGSDYDYDTPVKLLDRMLHGMARSDDEQVVVLSQV 552 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15979.4093.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15979.4093.1 >prot_E-fasciculatus_F_contig15979.4093.1 ID=prot_E-fasciculatus_F_contig15979.4093.1|Name=mRNA_E-fasciculatus_F_contig15979.4093.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=287bp MTKKTHTNNDDDDDDDSYPVGGECISITAGVVSRVEMTVYAQAEQELLSIback to top mRNA from alignment at E-fasciculatus_F_contig15979:499..2650+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15979.4093.1 ID=mRNA_E-fasciculatus_F_contig15979.4093.1|Name=mRNA_E-fasciculatus_F_contig15979.4093.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2152bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15979:499..2650+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15979:499..2650+ >mRNA_E-fasciculatus_F_contig15979.4093.1 ID=mRNA_E-fasciculatus_F_contig15979.4093.1|Name=mRNA_E-fasciculatus_F_contig15979.4093.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1722bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15979:499..2650+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |