prot_E-fasciculatus_F_contig15970.4091.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15970.4091.1
Unique Nameprot_E-fasciculatus_F_contig15970.4091.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length469
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15970.4091.1 vs. uniprot
Match: A0A6H5JK21_9PHAE (MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK21_9PHAE)

HSP 1 Score: 381 bits (979), Expect = 5.590e-122
Identity = 326/509 (64.05%), Postives = 339/509 (66.60%), Query Frame = 0 
Query:    1 MHSFQQEKAQLLSAARANGDTEKRKMLEETTPDVLNAKGLLMFLRQSPSSESPSPSGSPELQPATGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA-------------------------------VAPSRAGFAAGKASTAYSAAVAAVEPETTVRPPARPFAGPFPANGDGGGREQGLRGNREGGEQF-----SYRAPSSPPASVVDFLPSRPWSGSSGGSNVGAVTGVRRGGGGASSTPVPALPATPAGRSVFGDVGGGRPAVPASGAVMAAPRTAPKPRKPRFRIPVVTPSPSSTANTNSQPSRAPLAAHRATPPTPRSSGPSTS-TPYSIGVASAAAGPQQAAVAVTPGTPSVRRSPAELFTPSPLPSTAAGGGAGWRVAGSSAAAAAYPNPSP---AFDGRRCSSPK-RDAPPAAQGKVGRNGGSRXXXXXXXXXXXXXXXXXXXXXVEEAQKRPRASAV 468
            MHSFQQEKAQLLSAARANGDTEKRKMLEETTPDVLNAKGLLMFLRQSPSSE+PSPS SPELQPATG A XXXXXXXXXXX XXXXXXXXXXXXXXXXXX                    XXXXXXXXXXXXXXXXX                                 VAP+RAGFAA            A  PE TV+PPARPFAGP  ANGDGGGRE+GL GNREGGEQ      SYRAP +P  +VVDFLPSRPWSG+ G  +VGAV GVRRG   ASSTPVP  PATPA RSVFGDVGGGRPAVPA+G  M APRTAPKPRKPRFRIPVVTPSPSST N NSQP RAPLA H ATPPTPRSSGP+T+ TP SIGVASAAA PQQ  VAVTPGTPS R SP ELFTPSP+PS+                             FDGRRC SPK    PP A  K GRNGGSR                     VE AQKRPRASAV
Sbjct:  246 MHSFQQEKAQLLSAARANGDTEKRKMLEETTPDVLNAKGLLMFLRQSPSSETPSPSASPELQPATGPAAXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXGWVGEGLVLEGDGRRDSSPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAPARAGFAA------------AAAPERTVQPPARPFAGPCLANGDGGGRERGLTGNREGGEQDGGRCGSYRAPPAP-VNVVDFLPSRPWSGNGG--SVGAVIGVRRG---ASSTPVPVSPATPACRSVFGDVGGGRPAVPATGTAMTAPRTAPKPRKPRFRIPVVTPSPSSTPNANSQPRRAPLAVHHATPPTPRSSGPNTTATPDSIGVASAAAAPQQ--VAVTPGTPSARWSPVELFTPSPVPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFDGRRCRSPKCTSIPPDA--KAGRNGGSRAASSKRKQEEEGRK-------VEGAQKRPRASAV 725
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15970.4091.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JK21_9PHAE5.590e-12264.05MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 442..462

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15970contigE-fasciculatus_F_contig15970:1056..2462 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15970.4091.1mRNA_E-fasciculatus_F_contig15970.4091.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15970 1056..2474 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15970.4091.1 ID=prot_E-fasciculatus_F_contig15970.4091.1|Name=mRNA_E-fasciculatus_F_contig15970.4091.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=469bp
MHSFQQEKAQLLSAARANGDTEKRKMLEETTPDVLNAKGLLMFLRQSPSS
ESPSPSGSPELQPATGAAAAAAAAAAGGGGLVLDGSRRSSSPAGDDDDER
AGGDGRGGGGHHYGGRAGKAAVAFSGGGVCAAAAEEAAVAPSRAGFAAGK
ASTAYSAAVAAVEPETTVRPPARPFAGPFPANGDGGGREQGLRGNREGGE
QFSYRAPSSPPASVVDFLPSRPWSGSSGGSNVGAVTGVRRGGGGASSTPV
PALPATPAGRSVFGDVGGGRPAVPASGAVMAAPRTAPKPRKPRFRIPVVT
PSPSSTANTNSQPSRAPLAAHRATPPTPRSSGPSTSTPYSIGVASAAAGP
QQAAVAVTPGTPSVRRSPAELFTPSPLPSTAAGGGAGWRVAGSSAAAAAY
PNPSPAFDGRRCSSPKRDAPPAAQGKVGRNGGSRAASSSKRKQQEEEEEA
GERRRVEEAQKRPRASAV*
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