prot_E-fasciculatus_F_contig1051.408.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1051.408.1
Unique Nameprot_E-fasciculatus_F_contig1051.408.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length331
Homology
BLAST of mRNA_E-fasciculatus_F_contig1051.408.1 vs. uniprot
Match: D7FN63_ECTSI (Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (Mouse), isoform CRA_c n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN63_ECTSI)

HSP 1 Score: 471 bits (1212), Expect = 5.020e-157
Identity = 260/333 (78.08%), Postives = 277/333 (83.18%), Query Frame = 0
Query:    1 MNWHRAKWVAVAAELIVDQEHASWFKLPPGSTIEGGETFRDSNVHPAERCVHCFTRQEGSNSSAAATAATATRHRCMKTEGRKPSARFSACRSAVVKQSKRPKVLPRFELAEEKCCVIPADSESFIGMAAEYPYLHAEVRRPGVDDPERSRRLAVRVKSLDEKFEWLVSLDKEMAEARAAALKPASGPQDGQRPRNAEDEEKDDKTTQERKXXXXXXXRRVKARKERAKEAEAVRLQRLRELEEVIAAEEKEDGXXXXXXXXXARTXXXXXXDE---SLCIVCMTEKRNACLVHGKTAHLVVCLPCGKLLKKANMGCPICKRRIDVVIEAFTS 330
            +NWHRAKWVAVAAELIVDQEH SWFK+PPGST EGG+TFR+S VHPAERCVHC+T QEGSNSSAAA A T  RHRCMKTEGRKPSARFSACRSAVVKQSKR KVLPRFELAEEKCCVIPADSESF GMAAEYPY H E RRPGVDD ERSRRLAVRV+SLDEKF+WLVSLDKEMAEA+AAA +PASGPQDG+   NA+D+E+DDKTT+ERK       RRV             RLQRL+ELEE+IAAEEKEDG        X   XXXXXX     SLCIVCM EKRNACLVHGKTAHLVVCLPCGK LKKANMGCPICKRRIDVVIE+FTS
Sbjct:  571 INWHRAKWVAVAAELIVDQEHTSWFKVPPGSTKEGGDTFRNSGVHPAERCVHCYTPQEGSNSSAAAAAGT--RHRCMKTEGRKPSARFSACRSAVVKQSKRHKVLPRFELAEEKCCVIPADSESFTGMAAEYPYFHVEARRPGVDDSERSRRLAVRVRSLDEKFDWLVSLDKEMAEAKAAARRPASGPQDGEP--NAKDQEEDDKTTRERKAAQERKARRVXXXXXXXXXXXXXRLQRLKELEELIAAEEKEDGDGSAEGDSXXXXXXXXXXXXXXASLCIVCMAEKRNACLVHGKTAHLVVCLPCGKRLKKANMGCPICKRRIDVVIESFTS 899          
BLAST of mRNA_E-fasciculatus_F_contig1051.408.1 vs. uniprot
Match: A0A7R9Z1H2_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z1H2_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 7.100e-12
Identity = 27/55 (49.09%), Postives = 41/55 (74.55%), Query Frame = 0
Query:  274 ESLCIVCMTEKRNACLVHGKTAHLVVCLPCGKLLKKANMGCPICKRRIDVVIEAF 328
            + LC+VC++E+RNA +VHG+T H+  CL C ++LK   M CP+C+ +ID VI+ F
Sbjct:   65 QKLCLVCLSEERNATIVHGETGHIACCLTCARILKFRKMKCPVCRLKIDTVIQHF 119          
BLAST of mRNA_E-fasciculatus_F_contig1051.408.1 vs. uniprot
Match: A0A7M4EX23_CROPO (Uncharacterized protein n=1 Tax=Crocodylus porosus TaxID=8502 RepID=A0A7M4EX23_CROPO)

HSP 1 Score: 65.1 bits (157), Expect = 8.260e-10
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 0
Query:  277 CIVCMTEKRNACLVHGKTAHLVVCLPCGKLLKKANMGCPICKRRIDVVIEAF 328
            C+VC    RN  +VHGK+AHLV C  C K+L+K    CP+CK+ I  VI+ F
Sbjct:   39 CLVCQKRPRNGNIVHGKSAHLVACFRCAKMLRKGRSPCPVCKKEIHGVIKVF 90          
BLAST of mRNA_E-fasciculatus_F_contig1051.408.1 vs. uniprot
Match: A0A8D2L0R8_VARKO (Protein Mdm4 n=2 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2L0R8_VARKO)

HSP 1 Score: 70.5 bits (171), Expect = 8.790e-10
Identity = 27/52 (51.92%), Postives = 37/52 (71.15%), Query Frame = 0
Query:  277 CIVCMTEKRNACLVHGKTAHLVVCLPCGKLLKKANMGCPICKRRIDVVIEAF 328
            C++C  + RN  +VHGKTAHLV C  C K+LKK  + CP+CK++I +VI  F
Sbjct:  427 CLMCQKKPRNGNIVHGKTAHLVACFTCAKMLKKGRLPCPVCKKQIQMVIRTF 478          
BLAST of mRNA_E-fasciculatus_F_contig1051.408.1 vs. uniprot
Match: UPI00074FE4F5 (protein Mdm4 isoform X1 n=1 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FE4F5)

HSP 1 Score: 70.1 bits (170), Expect = 1.150e-9
Identity = 27/52 (51.92%), Postives = 37/52 (71.15%), Query Frame = 0
Query:  277 CIVCMTEKRNACLVHGKTAHLVVCLPCGKLLKKANMGCPICKRRIDVVIEAF 328
            C+VC    RN  +VHG+TAHLV C  C K+LKK  + CP+CK++I +VI+ F
Sbjct:  416 CLVCQRRPRNGNIVHGRTAHLVACFTCAKMLKKGRLPCPVCKKQIQMVIKIF 467          
BLAST of mRNA_E-fasciculatus_F_contig1051.408.1 vs. uniprot
Match: A0A8C3SVF4_CHESE (Uncharacterized protein n=1 Tax=Chelydra serpentina TaxID=8475 RepID=A0A8C3SVF4_CHESE)

HSP 1 Score: 64.7 bits (156), Expect = 1.260e-9
Identity = 24/52 (46.15%), Postives = 36/52 (69.23%), Query Frame = 0
Query:  277 CIVCMTEKRNACLVHGKTAHLVVCLPCGKLLKKANMGCPICKRRIDVVIEAF 328
            C++C    R+  +VHG++AHLV C  C K+LKK  + CP+CK++I +VI  F
Sbjct:   43 CLLCQKRPRDGNIVHGRSAHLVACFKCAKMLKKRRLPCPVCKKQIQMVIRIF 94          
BLAST of mRNA_E-fasciculatus_F_contig1051.408.1 vs. uniprot
Match: UPI002025E309 (protein Mdm4 isoform X1 n=2 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI002025E309)

HSP 1 Score: 69.7 bits (169), Expect = 1.530e-9
Identity = 27/52 (51.92%), Postives = 36/52 (69.23%), Query Frame = 0
Query:  277 CIVCMTEKRNACLVHGKTAHLVVCLPCGKLLKKANMGCPICKRRIDVVIEAF 328
            C+VC    RN  +VHG+TAHLV C+ C K+LKK    CP+CK++I +VI  F
Sbjct:  412 CLVCQKRPRNGNIVHGRTAHLVACITCAKMLKKGRSPCPVCKKQIQMVIRTF 463          
BLAST of mRNA_E-fasciculatus_F_contig1051.408.1 vs. uniprot
Match: A0A670JCG2_PODMU (Protein Mdm4 n=8 Tax=Lacertinae TaxID=162266 RepID=A0A670JCG2_PODMU)

HSP 1 Score: 69.7 bits (169), Expect = 1.550e-9
Identity = 28/52 (53.85%), Postives = 35/52 (67.31%), Query Frame = 0
Query:  277 CIVCMTEKRNACLVHGKTAHLVVCLPCGKLLKKANMGCPICKRRIDVVIEAF 328
            CI+C    RN  +VHG+TAHLV C  C K+LKK    CP+CKR+I +VI  F
Sbjct:  416 CIMCQKRPRNGNIVHGRTAHLVACFTCAKMLKKGQSPCPVCKRQIQMVIRTF 467          
BLAST of mRNA_E-fasciculatus_F_contig1051.408.1 vs. uniprot
Match: A0A8J2X1W1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X1W1_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.080e-9
Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 0
Query:  273 DESLCIVCMTEKRNACLVHGKTAHLVVCLPCGKLLKKANMGCPICKRRIDVVIEAF 328
            +ESLC+VC+T+ RNA  VHG+T H+  CL C + L+     CP+C+  +DVVI+ F
Sbjct:  312 NESLCVVCLTDARNATFVHGETGHIACCLLCARALQARGDSCPVCRLPVDVVIQHF 367          
BLAST of mRNA_E-fasciculatus_F_contig1051.408.1 vs. uniprot
Match: A0A8D0BCG2_9SAUR (Protein Mdm4 n=1 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0BCG2_9SAUR)

HSP 1 Score: 69.3 bits (168), Expect = 2.100e-9
Identity = 28/52 (53.85%), Postives = 35/52 (67.31%), Query Frame = 0
Query:  277 CIVCMTEKRNACLVHGKTAHLVVCLPCGKLLKKANMGCPICKRRIDVVIEAF 328
            C+VC   +RN  +VHG+TAHLV C  C  LLKK    CPICK++I +VI  F
Sbjct:  423 CLVCQKRRRNGNIVHGRTAHLVACFTCATLLKKGRSPCPICKKKIQMVIRTF 474          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1051.408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN63_ECTSI5.020e-15778.08Mdm2, transformed 3T3 cell double minute 2, p53 bi... [more]
A0A7R9Z1H2_9STRA7.100e-1249.09Hypothetical protein n=2 Tax=Pseudictyota dubia Ta... [more]
A0A7M4EX23_CROPO8.260e-1050.00Uncharacterized protein n=1 Tax=Crocodylus porosus... [more]
A0A8D2L0R8_VARKO8.790e-1051.92Protein Mdm4 n=2 Tax=Varanus komodoensis TaxID=612... [more]
UPI00074FE4F51.150e-951.92protein Mdm4 isoform X1 n=1 Tax=Gekko japonicus Ta... [more]
A0A8C3SVF4_CHESE1.260e-946.15Uncharacterized protein n=1 Tax=Chelydra serpentin... [more]
UPI002025E3091.530e-951.92protein Mdm4 isoform X1 n=2 Tax=Sphaerodactylus to... [more]
A0A670JCG2_PODMU1.550e-953.85Protein Mdm4 n=8 Tax=Lacertinae TaxID=162266 RepID... [more]
A0A8J2X1W1_9STRA2.080e-948.21Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8D0BCG2_9SAUR2.100e-953.85Protein Mdm4 n=1 Tax=Salvator merianae TaxID=96440... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 211..231
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 274..322
e-value: 1.0E-9
score: 38.1
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 268..324
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 268..330
e-value: 1.1E-19
score: 71.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1051contigE-fasciculatus_F_contig1051:476..3613 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1051.408.1mRNA_E-fasciculatus_F_contig1051.408.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1051 450..3796 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1051.408.1 ID=prot_E-fasciculatus_F_contig1051.408.1|Name=mRNA_E-fasciculatus_F_contig1051.408.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=331bp
MNWHRAKWVAVAAELIVDQEHASWFKLPPGSTIEGGETFRDSNVHPAERC
VHCFTRQEGSNSSAAATAATATRHRCMKTEGRKPSARFSACRSAVVKQSK
RPKVLPRFELAEEKCCVIPADSESFIGMAAEYPYLHAEVRRPGVDDPERS
RRLAVRVKSLDEKFEWLVSLDKEMAEARAAALKPASGPQDGQRPRNAEDE
EKDDKTTQERKAAQERKARRVKARKERAKEAEAVRLQRLRELEEVIAAEE
KEDGDGSGSAEGDARTDEEEEDDESLCIVCMTEKRNACLVHGKTAHLVVC
LPCGKLLKKANMGCPICKRRIDVVIEAFTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD