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|
Homology
BLAST of mRNA_E-fasciculatus_F_contig1051.408.1 vs. uniprot
Match: D7FN63_ECTSI (Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (Mouse), isoform CRA_c n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN63_ECTSI) HSP 1 Score: 486 bits (1251), Expect = 1.010e-161 Identity = 267/341 (78.30%), Postives = 284/341 (83.28%), Query Frame = 3
Query: 3 GRDPTVENMNWHRAKWVAVAAELIVDQEHASWFKLPPGSTIEGGETFRDSNVHPAERCVHCFTRQEGSNSSAAATAATATRHRCMKTEGRKPSARFSACRSAVVKQSKRPKVLPRFELAEEKCCVIPADSESFIGMAAEYPYLHAEVRRPGVDDPERSRRLAVRVKSLDEKFEWLVSLDKEMAEARAAALKPASGPQDGQRPRNAEDEEKDDKTTQERKXXXXXXXRRVKARKERAKEAEAVRLQRLRELEEVIAAEEKEDGXXXXXXXXXARTXXXXXXDE---SLCIVCMTEKRNACLVHGKTAHLVVCLPCGKLLKKANMGCPICKRRIDVVIEAFTS 1016
GRDPT EN+NWHRAKWVAVAAELIVDQEH SWFK+PPGST EGG+TFR+S VHPAERCVHC+T QEGSNSSAAA A T RHRCMKTEGRKPSARFSACRSAVVKQSKR KVLPRFELAEEKCCVIPADSESF GMAAEYPY H E RRPGVDD ERSRRLAVRV+SLDEKF+WLVSLDKEMAEA+AAA +PASGPQDG+ NA+D+E+DDKTT+ERK RRV RLQRL+ELEE+IAAEEKEDG X XXXXXX SLCIVCM EKRNACLVHGKTAHLVVCLPCGK LKKANMGCPICKRRIDVVIE+FTS
Sbjct: 563 GRDPTAENINWHRAKWVAVAAELIVDQEHTSWFKVPPGSTKEGGDTFRNSGVHPAERCVHCYTPQEGSNSSAAAAAGT--RHRCMKTEGRKPSARFSACRSAVVKQSKRHKVLPRFELAEEKCCVIPADSESFTGMAAEYPYFHVEARRPGVDDSERSRRLAVRVRSLDEKFDWLVSLDKEMAEAKAAARRPASGPQDGEP--NAKDQEEDDKTTRERKAAQERKARRVXXXXXXXXXXXXXRLQRLKELEELIAAEEKEDGDGSAEGDSXXXXXXXXXXXXXXASLCIVCMAEKRNACLVHGKTAHLVVCLPCGKRLKKANMGCPICKRRIDVVIESFTS 899
BLAST of mRNA_E-fasciculatus_F_contig1051.408.1 vs. uniprot
Match: A0A7R9Z1H2_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z1H2_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 2.110e-11 Identity = 27/55 (49.09%), Postives = 41/55 (74.55%), Query Frame = 3
Query: 846 ESLCIVCMTEKRNACLVHGKTAHLVVCLPCGKLLKKANMGCPICKRRIDVVIEAF 1010
+ LC+VC++E+RNA +VHG+T H+ CL C ++LK M CP+C+ +ID VI+ F
Sbjct: 65 QKLCLVCLSEERNATIVHGETGHIACCLTCARILKFRKMKCPVCRLKIDTVIQHF 119
BLAST of mRNA_E-fasciculatus_F_contig1051.408.1 vs. uniprot
Match: A0A7M4EX23_CROPO (Uncharacterized protein n=1 Tax=Crocodylus porosus TaxID=8502 RepID=A0A7M4EX23_CROPO) HSP 1 Score: 64.3 bits (155), Expect = 2.170e-9 Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 3
Query: 855 CIVCMTEKRNACLVHGKTAHLVVCLPCGKLLKKANMGCPICKRRIDVVIEAF 1010
C+VC RN +VHGK+AHLV C C K+L+K CP+CK+ I VI+ F
Sbjct: 39 CLVCQKRPRNGNIVHGKSAHLVACFRCAKMLRKGRSPCPVCKKEIHGVIKVF 90
BLAST of mRNA_E-fasciculatus_F_contig1051.408.1 vs. uniprot
Match: A0A8D2L0R8_VARKO (Protein Mdm4 n=2 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2L0R8_VARKO) HSP 1 Score: 69.7 bits (169), Expect = 2.890e-9 Identity = 27/52 (51.92%), Postives = 37/52 (71.15%), Query Frame = 3
Query: 855 CIVCMTEKRNACLVHGKTAHLVVCLPCGKLLKKANMGCPICKRRIDVVIEAF 1010
C++C + RN +VHGKTAHLV C C K+LKK + CP+CK++I +VI F
Sbjct: 427 CLMCQKKPRNGNIVHGKTAHLVACFTCAKMLKKGRLPCPVCKKQIQMVIRTF 478
BLAST of mRNA_E-fasciculatus_F_contig1051.408.1 vs. uniprot
Match: A0A8C3SVF4_CHESE (Uncharacterized protein n=1 Tax=Chelydra serpentina TaxID=8475 RepID=A0A8C3SVF4_CHESE) HSP 1 Score: 63.9 bits (154), Expect = 3.290e-9 Identity = 24/52 (46.15%), Postives = 36/52 (69.23%), Query Frame = 3
Query: 855 CIVCMTEKRNACLVHGKTAHLVVCLPCGKLLKKANMGCPICKRRIDVVIEAF 1010
C++C R+ +VHG++AHLV C C K+LKK + CP+CK++I +VI F
Sbjct: 43 CLLCQKRPRDGNIVHGRSAHLVACFKCAKMLKKRRLPCPVCKKQIQMVIRIF 94
BLAST of mRNA_E-fasciculatus_F_contig1051.408.1 vs. uniprot
Match: UPI00074FE4F5 (protein Mdm4 isoform X1 n=1 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FE4F5) HSP 1 Score: 69.3 bits (168), Expect = 3.750e-9 Identity = 27/52 (51.92%), Postives = 37/52 (71.15%), Query Frame = 3
Query: 855 CIVCMTEKRNACLVHGKTAHLVVCLPCGKLLKKANMGCPICKRRIDVVIEAF 1010
C+VC RN +VHG+TAHLV C C K+LKK + CP+CK++I +VI+ F
Sbjct: 416 CLVCQRRPRNGNIVHGRTAHLVACFTCAKMLKKGRLPCPVCKKQIQMVIKIF 467
BLAST of mRNA_E-fasciculatus_F_contig1051.408.1 vs. uniprot
Match: UPI002025E309 (protein Mdm4 isoform X1 n=2 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI002025E309) HSP 1 Score: 68.9 bits (167), Expect = 4.960e-9 Identity = 27/52 (51.92%), Postives = 36/52 (69.23%), Query Frame = 3
Query: 855 CIVCMTEKRNACLVHGKTAHLVVCLPCGKLLKKANMGCPICKRRIDVVIEAF 1010
C+VC RN +VHG+TAHLV C+ C K+LKK CP+CK++I +VI F
Sbjct: 412 CLVCQKRPRNGNIVHGRTAHLVACITCAKMLKKGRSPCPVCKKQIQMVIRTF 463
BLAST of mRNA_E-fasciculatus_F_contig1051.408.1 vs. uniprot
Match: A0A670JCG2_PODMU (Protein Mdm4 n=8 Tax=Lacertinae TaxID=162266 RepID=A0A670JCG2_PODMU) HSP 1 Score: 68.9 bits (167), Expect = 5.000e-9 Identity = 28/52 (53.85%), Postives = 35/52 (67.31%), Query Frame = 3
Query: 855 CIVCMTEKRNACLVHGKTAHLVVCLPCGKLLKKANMGCPICKRRIDVVIEAF 1010
CI+C RN +VHG+TAHLV C C K+LKK CP+CKR+I +VI F
Sbjct: 416 CIMCQKRPRNGNIVHGRTAHLVACFTCAKMLKKGQSPCPVCKRQIQMVIRTF 467
BLAST of mRNA_E-fasciculatus_F_contig1051.408.1 vs. uniprot
Match: A0A8J2X1W1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X1W1_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 6.360e-9 Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 3
Query: 843 DESLCIVCMTEKRNACLVHGKTAHLVVCLPCGKLLKKANMGCPICKRRIDVVIEAF 1010
+ESLC+VC+T+ RNA VHG+T H+ CL C + L+ CP+C+ +DVVI+ F
Sbjct: 312 NESLCVVCLTDARNATFVHGETGHIACCLLCARALQARGDSCPVCRLPVDVVIQHF 367
BLAST of mRNA_E-fasciculatus_F_contig1051.408.1 vs. uniprot
Match: A0A8D0BCG2_9SAUR (Protein Mdm4 n=1 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0BCG2_9SAUR) HSP 1 Score: 68.6 bits (166), Expect = 6.760e-9 Identity = 28/52 (53.85%), Postives = 35/52 (67.31%), Query Frame = 3
Query: 855 CIVCMTEKRNACLVHGKTAHLVVCLPCGKLLKKANMGCPICKRRIDVVIEAF 1010
C+VC +RN +VHG+TAHLV C C LLKK CPICK++I +VI F
Sbjct: 423 CLVCQKRRRNGNIVHGRTAHLVACFTCATLLKKGRSPCPICKKKIQMVIRTF 474
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Mammalia |
| Seed ortholog score | 69.3 |
| Seed ortholog evalue | 3.8e-09 |
| Seed eggNOG ortholog | 10029.XP_007636997.1 |
| Preferred name | MDM2 |
| KEGG ko | ko:K06643 |
| KEGG Pathway | ko01522,ko01524,ko04068,ko04110,ko04115,ko04120,ko04144,ko04151,ko04218,ko04919,ko05165,ko05169,ko05200,ko05202,ko05203,ko05205,ko05206,ko05214,ko05215,ko05218,ko05219,ko05220,map01522,map01524,map04068,map04110,map04115,map04120,map04144,map04151,map04218,map04919,map05165,map05169,map05200,map05202,map05203,map05205,map05206,map05214,map05215,map05218,map05219,map05220 |
| GOs | GO:0000075,GO:0000077,GO:0000122,GO:0000278,GO:0001568,GO:0001666,GO:0001944,GO:0001974,GO:0002027,GO:0002039,GO:0003007,GO:0003170,GO:0003171,GO:0003179,GO:0003181,GO:0003197,GO:0003203,GO:0003205,GO:0003206,GO:0003230,GO:0003231,GO:0003279,GO:0003281,GO:0003283,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004842,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006974,GO:0006977,GO:0007049,GO:0007089,GO:0007093,GO:0007154,GO:0007165,GO:0007275,GO:0007346,GO:0007399,GO:0007507,GO:0008016,GO:0008097,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0008284,GO:0009056,GO:0009057,GO:0009314,GO:0009628,GO:0009653,GO:0009719,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010212,GO:0010243,GO:0010332,GO:0010466,GO:0010468,GO:0010498,GO:0010556,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0010721,GO:0010941,GO:0010948,GO:0010951,GO:0010955,GO:0010975,GO:0010977,GO:0012506,GO:0014910,GO:0014911,GO:0016020,GO:0016043,GO:0016567,GO:0016579,GO:0016740,GO:0016874,GO:0016925,GO:0018193,GO:0018205,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0019788,GO:0019789,GO:0019843,GO:0019899,GO:0019904,GO:0019941,GO:0022008,GO:0022402,GO:0022607,GO:0023051,GO:0023052,GO:0023057,GO:0030139,GO:0030154,GO:0030162,GO:0030163,GO:0030330,GO:0030334,GO:0030335,GO:0030659,GO:0030666,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031331,GO:0031344,GO:0031345,GO:0031410,GO:0031570,GO:0031571,GO:0031625,GO:0031647,GO:0031648,GO:0031974,GO:0031981,GO:0031982,GO:0032268,GO:0032269,GO:0032270,GO:0032386,GO:0032388,GO:0032434,GO:0032436,GO:0032446,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033157,GO:0033365,GO:0033554,GO:0033612,GO:0034504,GO:0034613,GO:0035556,GO:0035902,GO:0036211,GO:0036293,GO:0036294,GO:0036369,GO:0040012,GO:0040017,GO:0042127,GO:0042176,GO:0042221,GO:0042770,GO:0042802,GO:0042975,GO:0042981,GO:0043021,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043154,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043281,GO:0043412,GO:0043516,GO:0043518,GO:0043632,GO:0043933,GO:0044057,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0044877,GO:0045184,GO:0045202,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0045732,GO:0045786,GO:0045787,GO:0045861,GO:0045862,GO:0045892,GO:0045930,GO:0045931,GO:0045934,GO:0046677,GO:0046822,GO:0046824,GO:0046825,GO:0046827,GO:0046872,GO:0046914,GO:0047485,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048660,GO:0048661,GO:0048699,GO:0048729,GO:0048731,GO:0048771,GO:0048856,GO:0048869,GO:0050767,GO:0050768,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051093,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051270,GO:0051272,GO:0051336,GO:0051346,GO:0051603,GO:0051641,GO:0051716,GO:0051726,GO:0051865,GO:0051960,GO:0051961,GO:0052547,GO:0052548,GO:0060255,GO:0060284,GO:0060341,GO:0060411,GO:0060485,GO:0060548,GO:0061136,GO:0061630,GO:0061659,GO:0061663,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070482,GO:0070613,GO:0070646,GO:0070647,GO:0070727,GO:0070887,GO:0071156,GO:0071157,GO:0071158,GO:0071214,GO:0071236,GO:0071310,GO:0071417,GO:0071453,GO:0071456,GO:0071478,GO:0071479,GO:0071480,GO:0071495,GO:0071704,GO:0071840,GO:0071944,GO:0072132,GO:0072331,GO:0072358,GO:0072359,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0072716,GO:0072717,GO:0080090,GO:0080134,GO:0080135,GO:0090068,GO:0090087,GO:0090316,GO:0097110,GO:0097159,GO:0097435,GO:0097708,GO:0097718,GO:0098588,GO:0098805,GO:0104004,GO:0120035,GO:0140096,GO:1900087,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901796,GO:1901797,GO:1901800,GO:1901987,GO:1901988,GO:1901989,GO:1901990,GO:1901991,GO:1901992,GO:1902253,GO:1902254,GO:1902400,GO:1902402,GO:1902403,GO:1902531,GO:1902532,GO:1902679,GO:1902806,GO:1902807,GO:1902808,GO:1903047,GO:1903050,GO:1903052,GO:1903317,GO:1903318,GO:1903362,GO:1903364,GO:1903506,GO:1903507,GO:1903522,GO:1903827,GO:1903829,GO:1904705,GO:1904707,GO:1904752,GO:1904754,GO:1904951,GO:1990000,GO:1990785,GO:2000026,GO:2000045,GO:2000058,GO:2000060,GO:2000112,GO:2000113,GO:2000116,GO:2000117,GO:2000134,GO:2000145,GO:2000147,GO:2001020,GO:2001021,GO:2001141,GO:2001233,GO:2001234,GO:2001242,GO:2001243 |
| EggNOG free text desc. | E3 ubiquitin-protein ligase |
| EggNOG OGs | 2C54B@1,2QQNV@2759,35DZ0@314146,38CCR@33154,3BC1S@33208,3CWET@33213,3JE75@40674,4884C@7711,4957B@7742,4Q42D@9989 |
| EC | 2.3.2.27 |
| COG Functional cat. | K |
| Best tax level | Rodentia |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko04121,ko04131 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Zinc finger, RING/FYVE/PHD-type |
| Ec32 ortholog | Ec-06_008540.1 |
| Exons | 6 |
| Model size | 1202 |
| Cds size | 993 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1051.408.1 >prot_E-fasciculatus_F_contig1051.408.1 ID=prot_E-fasciculatus_F_contig1051.408.1|Name=mRNA_E-fasciculatus_F_contig1051.408.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=331bp
MNWHRAKWVAVAAELIVDQEHASWFKLPPGSTIEGGETFRDSNVHPAERC
VHCFTRQEGSNSSAAATAATATRHRCMKTEGRKPSARFSACRSAVVKQSK
RPKVLPRFELAEEKCCVIPADSESFIGMAAEYPYLHAEVRRPGVDDPERS
RRLAVRVKSLDEKFEWLVSLDKEMAEARAAALKPASGPQDGQRPRNAEDE
EKDDKTTQERKAAQERKARRVKARKERAKEAEAVRLQRLRELEEVIAAEE
KEDGDGSGSAEGDARTDEEEEDDESLCIVCMTEKRNACLVHGKTAHLVVC
LPCGKLLKKANMGCPICKRRIDVVIEAFTS* back to topmRNA from alignment at E-fasciculatus_F_contig1051:450..3796+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig1051.408.1 ID=mRNA_E-fasciculatus_F_contig1051.408.1|Name=mRNA_E-fasciculatus_F_contig1051.408.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3347bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1051:450..3796+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGGGCAGGGACCCCACCGTCGAGAACATGAACTGGCACCGTGCCAAGTGG
GTTGCCGTCGCGGCCGAGCTTATCGTCGACCAGGAGCACGCTTCATGGTG
AGATGCGTGGAAACTTGTCGAACTCTCTCGAGGGTAGAGACCCCTCAACA
ACTTGCTGGGCAAGAATTTTGTACGAACGGAACGCGTTAGCCCACTGTAC
GGCGCTCTCCGTCTCTGCCTTGCGCGCGATCCGGTCAGGTTTAAGCTTCC
TCCTGGGTCAACGATTGAAGGCGGAGAAACGTTCCGCGATTCCAACGTGC
ACCCTGCCGAACGGTGTGTGCACTGCTTCACCCGGCAGGAGGGTAGCAAC
TCCTCCGCTGCCGCCACCGCCGCCACCGCCACCCGACATAGATGCATGAA
GACGGAGGGCCGCAAGCCGAGTGCCCGGTTCTCCGCGTGCAGATCGGCCG
TTGTCAAGCAGTCGAAACGGCCCAAGGTTCTCCCGCGCTTCGAGCTGGCG
GAGGAGAAGTGCTGCGTCATTCCCGCAGATTCTGAAAGTTTCATCGGCAT
GGCAGCGGAGTACCCTTACTTGCACGCTGAGGTTAGGCGTCCCGGGGTGA
GTTGAGGAGTTGACGCCTTGTCCTGCCGCGTGCGGCTCTGTCACCGGTGA
CTTTTTTGTGGGAAAAAGTCATCAAATTACAGAAAGACTACCTGTTGGAG
GTATTGCCACGGTCGAAGAGGATGCGGTCAAGTCTTCACAGAGTGACTTG
TTGTTGTTGTTGTCGTCGTCTTGACATTTACGATCGTTCCGGTCTCCGCT
CAGTACTGTACCTTCTTGTGTCCGTCCTGGTCCAACTAGAGAGAGATAAA
ACCCGACTGGATGTTGGGCTTATTTTGAGGCGATTTTAGTCTCAAGACCG
AGGTTTACGCGATGATGCCAGCTGGCGGTAACTGGGAAACATGTGCATGG
GAATATGGTGTATGAAACATCCCCTGTAACCCTCTCTCTACTTGGCCAAC
GACAAAACTTTGCTTCTGCCACGCCACGTCTGTGGTTCGAAACGCGTGAT
GGCTTGAAGCCGAACTGGGGAATGGTTTCCGTCCCGGCAAGAGAGCCACG
AGTCCACACACACATACTGGTATGGCGGGAAGGAAAGTCGTATCTCTTGT
TTTGTATCGAATGCCGGTATCGGTGGCCCTGTTATGTGATTTCCTTGTTT
ATGCGGCAGGTTGACGACCCCGAACGCTCACGGCGATTGGCAGTTCGTGT
CAAGAGCCTCGACGAGAAGTTCGAGTGGTTGGTAAGGTACGTGTCGCGTC
TTGTTTTTCCCTGTGGCTGCTGAAAGCGCCAACAAGTCTTGGTTGGGACA
CAACCCCGGCCTTCTCGTTCTGAGAAAGATAAGCATATCGCTCTCTCACC
ACGCGCATCCCCGTGTGTTTTTTGGGGGGGGACGTGCTGCAACATGTCTA
TTCCGTGTTCTTTTGAAACTAAATTGACTACAAGTACGATGGAGACCGGG
TGCTCCAGCCGCACGGCAAGCTTACCTCGGCTCTCTCCTCTTTACGCTGT
TTTTGTCTCGGACAGACTGTTGTCGTCATATCTTGATTCATTCCAACGCC
CATTCTTTTCAGTACCGCCCTCGACGAGCGAAGCGTGATGGAGGAAAGTA
CCACTCTGGTAGTTGTCGTTCACTCCCACGTTTATGTGGCTGTCCCTCTC
CTGCTCTCGTGCACGCTATAAAATGCTCTAAATAGGTCGAAATAGTTCAC
TCTTCATTATTTTCTTTATAACAATGGGGCCCTGTCTATTTTTTTGTGTC
AACTTTTTTCTTGCGGGACTCAAGCCTCGACAAGGAAATGGCCGAGGCGA
GGGCCGCGGCACTAAAACCCGCCTCCGGACCACAAGATGGCCAGAGGCCG
CGGAACGCAGAAGACGAGGAGAAAGACGACAAGACCACGCAAGAGCGCAA
GGCGGTGAGACACGTCAGCGAGAGACCCCGCATTGGTAAAATTACAGGGG
ACACGTTTGAGCGTCCCACCAGGGGGTCCGGTGTAGCGCAGGGGGTGTTG
TGGTTGCTTTTGCCCGGATGCGTCGATTCTTGCGCGGGGTAAGTTCGCGC
GCGCAGCCGTATGGTCTTTGAAGCCGCCGGCCACACCACGTGATTCTTGG
TTCCCGGATAAGATTTTGGATGTCTGCAGCAAGTAGCATGTGAGATTATT
TCACACCCGAACGACCGTCTGCCTTCTGTCTGGCCGGTCGTCTTCATGAG
GTGGGTTTTCACCGATAAATAGTTGGCAGGGGTATTACAAGGTTTCCCAT
GAAACGCGTGTCGCGGCGTTGCCTTGGTGTTGCATGGAGGTGCACCGTTT
GTCACAGCAGCGTTTCGCCCCGCTGTGTGAACAGTGTGGAACAGTTGTTT
TTCTGTGCGAGGGTGGGGGTGTCTAAGGGGCGCTTTGTTCTTGTGGTTTT
GTGGAGGCTCTGTTCGCGCATGGCCAGAAAACTGCGGGCGATTTGCTTTC
CGCGGTGCTCGGCAGTTCAAAGCGCCGGTCATCTTGGCGGCACGCCTCTA
AAAGCATGCTCGGCAAGTCCCCACGTTTTTCCTCGATAGGAGCACCCACG
TCAGCCTTGAACCGCTCATCAGGAGGCCCATGCCTGACAACACGTCTGGA
ATTGTAACTCTTTTCGTTCTCGTACACTCAGGCACAAGAGCGGAAGGCTC
GGCGCGTGAAGGCCAGGAAGGAGCGGGCAAAGGAAGCGGTGAGTCTTCGT
AGGGTAGGATTTCCATCCATGTCTACTACACTGACGACAGGCTTTTCGCA
CTCCGGCCGTTGGTCACGAAGGCTGAGATGCTCATTATTTCGTTGTTTCT
CCCGGGCGTCGCAGGAGGCGGTGCGACTGCAGCGCCTAAGAGAGCTGGAA
GAGGTGATCGCCGCCGAGGAGAAAGAGGACGGCGATGGCAGCGGCAGCGC
CGAAGGCGACGCTCGCACAGACGAAGAAGAGGAGGACGACGAGTCCTTGT
GCATCGTGTGCATGACCGAGAAACGAAACGCCTGCCTGGTCCATGGCAAG
ACCGCTCACTTGGTCGTCTGCTTGCCCTGCGGGAAGCTGCTCAAGAAAGC
CAACATGGGGTGCCCAATCTGCAAGCGCAGAATCGATGTAGTCATCGAAG
CCTTCACGTCGTAATTATGCATGTACGAAGCATACAAAAACTCTCAAGTT
GTTATCATAGCCAACCCGCTTATCATAAATGGACCTGTCGTGTGGTGCCA
GTAGTCTCGAGTGGTGCGTTCGCCCCTTGGTTGAATGTTCCGGTCGTAAA
GGTATTTATTCGAGGCTGTCGTGTTGTAGGCTGTGCGGTGTGTTTCT back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig1051:450..3796+ >mRNA_E-fasciculatus_F_contig1051.408.1 ID=mRNA_E-fasciculatus_F_contig1051.408.1|Name=mRNA_E-fasciculatus_F_contig1051.408.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1986bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1051:450..3796+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAACTGGCACCGTGCCAAGTGGGTTGCCGTCGCGGCCGAGCTTATCGT
CGACCAGGAGCACGCTTCATGATGAACTGGCACCGTGCCAAGTGGGTTGC
CGTCGCGGCCGAGCTTATCGTCGACCAGGAGCACGCTTCATGGTTTAAGC
TTCCTCCTGGGTCAACGATTGAAGGCGGAGAAACGTTCCGCGATTCCAAC
GTGCACCCTGCCGAACGGTGTGTGCACTGCTTCACCCGGCAGGAGGGTAG
CAACTCCTCCGCTGCCGCCACCGCCGCCACCGCCACCCGACATAGATGCA
TGAAGACGGAGGGCCGCAAGCCGAGTGCCCGGTTCTCCGCGTGCAGATCG
GCCGTTGTCAAGCAGTCGAAACGGCCCAAGGTTCTCCCGCGCTTCGAGCT
GGCGGAGGAGAAGTGCTGCGTCATTCCCGCAGATTCTGAAAGTTTCATCG
GCATGGCAGCGGAGTACCCTTACTTGCACGCTGAGGTTAGGCGTCCCGGG
GTTTAAGCTTCCTCCTGGGTCAACGATTGAAGGCGGAGAAACGTTCCGCG
ATTCCAACGTGCACCCTGCCGAACGGTGTGTGCACTGCTTCACCCGGCAG
GAGGGTAGCAACTCCTCCGCTGCCGCCACCGCCGCCACCGCCACCCGACA
TAGATGCATGAAGACGGAGGGCCGCAAGCCGAGTGCCCGGTTCTCCGCGT
GCAGATCGGCCGTTGTCAAGCAGTCGAAACGGCCCAAGGTTCTCCCGCGC
TTCGAGCTGGCGGAGGAGAAGTGCTGCGTCATTCCCGCAGATTCTGAAAG
TTTCATCGGCATGGCAGCGGAGTACCCTTACTTGCACGCTGAGGTTAGGC
GTCCCGGGGTTGACGACCCCGAACGCTCACGGCGATTGGCAGTTCGTGTC
AAGAGCCTCGACGAGAAGTTCGAGTGGTTGGTAAGGTTGACGACCCCGAA
CGCTCACGGCGATTGGCAGTTCGTGTCAAGAGCCTCGACGAGAAGTTCGA
GTGGTTGGTAAGCCTCGACAAGGAAATGGCCGAGGCGAGGGCCGCGGCAC
TAAAACCCGCCTCCGGACCACAAGATGGCCAGAGGCCGCGGAACGCAGAA
GACGAGGAGAAAGACGACAAGACCACGCAAGAGCGCAAGGCGCCTCGACA
AGGAAATGGCCGAGGCGAGGGCCGCGGCACTAAAACCCGCCTCCGGACCA
CAAGATGGCCAGAGGCCGCGGAACGCAGAAGACGAGGAGAAAGACGACAA
GACCACGCAAGAGCGCAAGGCGGCACAAGAGCGGAAGGCTCGGCGCGTGA
AGGCCAGGAAGGAGCGGGCAAAGGAAGCGGCACAAGAGCGGAAGGCTCGG
CGCGTGAAGGCCAGGAAGGAGCGGGCAAAGGAAGCGGAGGCGGTGCGACT
GCAGCGCCTAAGAGAGCTGGAAGAGGTGATCGCCGCCGAGGAGAAAGAGG
ACGGCGATGGCAGCGGCAGCGCCGAAGGCGACGCTCGCACAGACGAAGAA
GAGGAGGACGACGAGTCCTTGTGCATCGTGTGCATGACCGAGAAACGAAA
CGCCTGCCTGGTCCATGGCAAGACCGCTCACTTGGTCGTCTGCTTGCCCT
GCGGGAAGCTGCTCAAGAAAGCCAACATGGGGTGCCCAATCTGCAAGCGC
AGAATCGATGTAGTCATCGAAGCCTTCACGTCGTAAGAGGCGGTGCGACT
GCAGCGCCTAAGAGAGCTGGAAGAGGTGATCGCCGCCGAGGAGAAAGAGG
ACGGCGATGGCAGCGGCAGCGCCGAAGGCGACGCTCGCACAGACGAAGAA
GAGGAGGACGACGAGTCCTTGTGCATCGTGTGCATGACCGAGAAACGAAA
CGCCTGCCTGGTCCATGGCAAGACCGCTCACTTGGTCGTCTGCTTGCCCT
GCGGGAAGCTGCTCAAGAAAGCCAACATGGGGTGCCCAATCTGCAAGCGC
AGAATCGATGTAGTCATCGAAGCCTTCACGTCGTAA back to top
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