mRNA_E-fasciculatus_F_contig10509.407.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Match: D8LLM3_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM3_ECTSI) HSP 1 Score: 62.4 bits (150), Expect = 4.740e-9 Identity = 29/40 (72.50%), Postives = 33/40 (82.50%), Query Frame = 1
Query: 13 GKYEEAAPLYLRAIEIGETKLGTEHPKLATWLNNRAELLR 132
G+ EA PLYLRAIE+GE KLG +HP LATWLNN+A LLR
Sbjct: 8 GEDTEADPLYLRAIEVGEKKLGPDHPDLATWLNNQAVLLR 47
BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Match: A0A6H5K0C4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0C4_9PHAE) HSP 1 Score: 63.9 bits (154), Expect = 1.050e-8 Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 1
Query: 10 QGKYEEAAPLYLRAIEIGETKLGTEHPKLATWLNNRA 120
QGKYEEA PLYLRA+EIGE LG +HP LA WLNN+A
Sbjct: 7 QGKYEEADPLYLRAVEIGEKTLGPDHPTLAVWLNNKA 43
BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Match: A0A6H5L045_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L045_9PHAE) HSP 1 Score: 61.6 bits (148), Expect = 7.760e-8 Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 1
Query: 13 GKYEEAAPLYLRAIEIGETKLGTEHPKLATWLNNRAELLR 132
GKY EA PLYLRAI+IG+ LG +HP LA WLNNRA LL+
Sbjct: 10 GKYAEADPLYLRAIDIGKKMLGPDHPDLAAWLNNRAGLLK 49
BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI) HSP 1 Score: 61.6 bits (148), Expect = 1.810e-7 Identity = 31/43 (72.09%), Postives = 32/43 (74.42%), Query Frame = 1
Query: 1 LATQGKYEEAAPLYLRAIEIGETKLGTEHPKLATWLNNRAELL 129
L GKY EA PLYLRAIEIGE LG +HP LAT LNNRA LL
Sbjct: 609 LELMGKYAEADPLYLRAIEIGENTLGPDHPALATQLNNRAGLL 651
BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE) HSP 1 Score: 61.2 bits (147), Expect = 2.390e-7 Identity = 29/41 (70.73%), Postives = 31/41 (75.61%), Query Frame = 1
Query: 10 QGKYEEAAPLYLRAIEIGETKLGTEHPKLATWLNNRAELLR 132
+G + EA P LRAIEIGE LG EHP LA WLNNRAELLR
Sbjct: 643 EGNFAEADPFNLRAIEIGEKVLGPEHPDLAVWLNNRAELLR 683
BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Match: A0A6H5J7J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J8_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 2.680e-7 Identity = 26/36 (72.22%), Postives = 32/36 (88.89%), Query Frame = 1
Query: 535 AIPLLERALRIRTKKLGDNHPDTVSTRDRLELVREK 642
A+PLLERAL IR KKLG+NHPDTVST++ L++VR K
Sbjct: 7 AVPLLERALSIRMKKLGENHPDTVSTQNSLDVVRRK 42
BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Match: UPI0013D29528 (tetratricopeptide repeat protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D29528) HSP 1 Score: 54.7 bits (130), Expect = 1.120e-6 Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 1
Query: 7 TQGKYEEAAPLYLRAIEIGETKLGTEHPKLATWLNNRAEL 126
+QGKYEEA PLY RA++I ET LG +HP +AT LNN A L
Sbjct: 3 SQGKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLAGL 42
BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Match: A0A7S3NLU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLU4_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 1.420e-6 Identity = 26/36 (72.22%), Postives = 27/36 (75.00%), Query Frame = 1
Query: 1 LATQGKYEEAAPLYLRAIEIGETKLGTEHPKLATWL 108
L +QGKY EA PLY RAIEIGE LG HP LATWL
Sbjct: 9 LESQGKYNEAKPLYERAIEIGEKTLGPNHPNLATWL 44
BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Match: A0A6H5K4D0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D0_9PHAE) HSP 1 Score: 57.4 bits (137), Expect = 4.930e-6 Identity = 26/41 (63.41%), Postives = 31/41 (75.61%), Query Frame = 1
Query: 10 QGKYEEAAPLYLRAIEIGETKLGTEHPKLATWLNNRAELLR 132
+GKY++A PLY+RAI IGE LG EHP LA WLN A LL+
Sbjct: 12 EGKYDDAEPLYVRAIAIGEKSLGPEHPDLAVWLNYWAGLLK 52
BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Match: A0A6H5K2T5_9PHAE (PK_Tyr_Ser-Thr domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T5_9PHAE) HSP 1 Score: 56.2 bits (134), Expect = 1.030e-5 Identity = 26/43 (60.47%), Postives = 32/43 (74.42%), Query Frame = 1
Query: 1 LATQGKYEEAAPLYLRAIEIGETKLGTEHPKLATWLNNRAELL 129
+ QGKY EA PL LRA++IG++ LG +HP LA WL NRA LL
Sbjct: 550 ITLQGKYAEADPLILRAMDIGKSPLGPDHPDLALWLGNRACLL 592 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10509.407.1 >prot_E-fasciculatus_F_contig10509.407.1 ID=prot_E-fasciculatus_F_contig10509.407.1|Name=mRNA_E-fasciculatus_F_contig10509.407.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=215bp LATQGKYEEAAPLYLRAIEIGETKLGTEHPKLATWLNNRAELLRVQGKYAback to top mRNA from alignment at E-fasciculatus_F_contig10509:76..2336- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10509.407.1 ID=mRNA_E-fasciculatus_F_contig10509.407.1|Name=mRNA_E-fasciculatus_F_contig10509.407.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2261bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10509:76..2336- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10509:76..2336- >mRNA_E-fasciculatus_F_contig10509.407.1 ID=mRNA_E-fasciculatus_F_contig10509.407.1|Name=mRNA_E-fasciculatus_F_contig10509.407.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1290bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10509:76..2336- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |