mRNA_E-fasciculatus_F_contig15932.4062.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig15932.4062.1
Unique NamemRNA_E-fasciculatus_F_contig15932.4062.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15932.4062.1 vs. uniprot
Match: D8LNB7_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB7_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 6.640e-81
Identity = 146/152 (96.05%), Postives = 146/152 (96.05%), Query Frame = 1 
Query:   94 GGREKREVERLLLEVFSSLPEPDSIYGVPAPAADLSAQATVYAHEGGWENTLPAYDTLLQSEHQRPPLAXXXXXXXXXXXXXXLLLPPGIGLQTGVAASLQRMGLRHVLEHYLRGLRVGPASLRGLPDLDGDLRDMQFESAWRMSEWDPALS 549
            GGREKREVERLLLEVFSSLPEPDSIYGVPAPAADLSAQATVYAHEGGWENTLPAYDTLLQS HQRPPLA  XXXXXXXXX   LLLPPGIGLQTGVAASLQRMGLRHVLEHYLRGLRVGPASLRGLPDLDGDLRDMQFESAWRMSEWDPALS
Sbjct: 2459 GGREKREVERLLLEVFSSLPEPDSIYGVPAPAADLSAQATVYAHEGGWENTLPAYDTLLQSGHQRPPLAAGXXXXXXXXXS--LLLPPGIGLQTGVAASLQRMGLRHVLEHYLRGLRVGPASLRGLPDLDGDLRDMQFESAWRMSEWDPALS 2608
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15932.4062.1 vs. uniprot
Match: A0A6H5KI56_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI56_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 1.390e-33
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 1 
Query:  100 REKREVERLLLEVFSSLPEPDSIYGVPAPAADLSAQATVYAHEGGWENTLPAYDTLLQSEHQRPPLA 300
            REKREVERLLLEVFSSLPEPDSIYGVPAPAADLSAQATVYAHEGGWENTLPAYDTLLQS HQRPPLA
Sbjct: 2584 REKREVERLLLEVFSSLPEPDSIYGVPAPAADLSAQATVYAHEGGWENTLPAYDTLLQSGHQRPPLA 2650
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15932.4062.1 vs. uniprot
Match: A0A5J4Y5R1_9CHLO (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y5R1_9CHLO)

HSP 1 Score: 76.3 bits (186), Expect = 8.040e-13
Identity = 52/152 (34.21%), Postives = 76/152 (50.00%), Query Frame = 1 
Query:  118 ERLLLEVFSSLPEPDSIYGVPAPAADLSAQATVYAHEGGWENTLPAYDTLLQSEHQRPPLAXXXXXXXXXXXXXXLLLPPGIGL----------QTGVAASLQRMGLRHVLEHYLRGLRVGPASLRGLPDLDGDLRDMQFESAWRMSEWDPA 543
            + LLL+++SS+ EPD IY V A    + +Q  +Y HE  W+  L  YD L +   + PP +               L  PG G           Q G+  +LQ++G RH++E Y +G    PAS+   P  DG   +M++ESAWRM +W  A
Sbjct: 1735 DELLLDIYSSMNEPDGIYAV-ARGHSMVSQLKLYEHESSWDKALTGYDLLCR---RAPPASTSLASP---------LAQPGPGTPVSGGSCAHWQQGLLTALQQLGCRHLIEAYWQGQ---PASVS--PG-DGRSGEMRYESAWRMGQWKSA 1867
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15932.4062.1 vs. uniprot
Match: UPI00145535D7 (serine-protein kinase ATM-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI00145535D7)

HSP 1 Score: 75.1 bits (183), Expect = 2.010e-12
Identity = 46/150 (30.67%), Postives = 66/150 (44.00%), Query Frame = 1 
Query:  115 VERLLLEVFSSLPEPDSIYGVPAPA-ADLSAQATVYAHEGGWENTLPAYDTLLQSEHQRPPLAXXXXXXXXXXXXXXLLLPPGIGLQTGVAASLQRMGLRHVLEHYLRGLR-----VGPASLRGLPDLDGDLRDMQFESAWRMSEWDPAL 546
            ++ LLLE +SS+ EPD +YG  A    D  A+   Y HEG W+  L AYD  L S+                              + G+  ++Q  GL H+L  YL GLR     +GP           ++ + Q+E+AWR  +WD  L
Sbjct: 1634 IQSLLLEAYSSIGEPDGVYGCGAGRLTDTCARIHTYEHEGDWDKALSAYDLKLHSKSTHTGQE-----------------------EIGILQAMQNKGLSHILNVYLHGLRSEQVVIGP-----------EMAEFQYEAAWRNGQWDQEL 1749
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15932.4062.1 vs. uniprot
Match: A0A452ZII9_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452ZII9_AEGTS)

HSP 1 Score: 74.3 bits (181), Expect = 3.230e-12
Identity = 47/149 (31.54%), Postives = 71/149 (47.65%), Query Frame = 1 
Query:  124 LLLEVFSSLPEPDSIYGVPAPAADLSAQATVYAHEGGWENTLPAYDTLLQSEHQRPPLAXXXXXXXXXXXXXXLLLPPGIG-----------LQTGVAASLQRMGLRHVLEHYLRGLRVGPASLRGLPDLDGDLRDMQFESAWRMSEWD 537
            LL+E F+ + EPDSIYG+   A ++++Q   Y HEG W + L  YD L++S  +                   +L  P +            +  G+  SLQ+ G  HVL+ Y +GL    A L+     D +  D+Q+E+AWR   WD
Sbjct:  222 LLVEAFTHINEPDSIYGITL-ANEVASQIIRYEHEGNWSSALEYYDLLVRSTPKE----------NLANFAGTVLTGPSVSSKAEENLLNWKMHKGLMRSLQKTGCSHVLDIYSQGLTNQKACLQQ----DSEFVDIQYEAAWRAGNWD 355
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15932.4062.1 vs. uniprot
Match: A0A452ZIK8_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452ZIK8_AEGTS)

HSP 1 Score: 74.3 bits (181), Expect = 3.360e-12
Identity = 47/149 (31.54%), Postives = 71/149 (47.65%), Query Frame = 1 
Query:  124 LLLEVFSSLPEPDSIYGVPAPAADLSAQATVYAHEGGWENTLPAYDTLLQSEHQRPPLAXXXXXXXXXXXXXXLLLPPGIG-----------LQTGVAASLQRMGLRHVLEHYLRGLRVGPASLRGLPDLDGDLRDMQFESAWRMSEWD 537
            LL+E F+ + EPDSIYG+   A ++++Q   Y HEG W + L  YD L++S  +                   +L  P +            +  G+  SLQ+ G  HVL+ Y +GL    A L+     D +  D+Q+E+AWR   WD
Sbjct:   58 LLVEAFTHINEPDSIYGITL-ANEVASQIIRYEHEGNWSSALEYYDLLVRSTPKE----------NLANFAGTVLTGPSVSSKAEENLLNWKMHKGLMRSLQKTGCSHVLDIYSQGLTNQKACLQQ----DSEFVDIQYEAAWRAGNWD 191
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15932.4062.1 vs. uniprot
Match: A0A452ZIL7_AEGTS (Uncharacterized protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452ZIL7_AEGTS)

HSP 1 Score: 74.3 bits (181), Expect = 3.450e-12
Identity = 47/149 (31.54%), Postives = 71/149 (47.65%), Query Frame = 1 
Query:  124 LLLEVFSSLPEPDSIYGVPAPAADLSAQATVYAHEGGWENTLPAYDTLLQSEHQRPPLAXXXXXXXXXXXXXXLLLPPGIG-----------LQTGVAASLQRMGLRHVLEHYLRGLRVGPASLRGLPDLDGDLRDMQFESAWRMSEWD 537
            LL+E F+ + EPDSIYG+   A ++++Q   Y HEG W + L  YD L++S  +                   +L  P +            +  G+  SLQ+ G  HVL+ Y +GL    A L+     D +  D+Q+E+AWR   WD
Sbjct:  814 LLVEAFTHINEPDSIYGITL-ANEVASQIIRYEHEGNWSSALEYYDLLVRSTPKE----------NLANFAGTVLTGPSVSSKAEENLLNWKMHKGLMRSLQKTGCSHVLDIYSQGLTNQKACLQQ----DSEFVDIQYEAAWRAGNWD 947
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15932.4062.1 vs. uniprot
Match: A0A452ZIJ7_AEGTS (Non-specific serine/threonine protein kinase n=3 Tax=Triticinae TaxID=1648030 RepID=A0A452ZIJ7_AEGTS)

HSP 1 Score: 74.3 bits (181), Expect = 3.470e-12
Identity = 47/149 (31.54%), Postives = 71/149 (47.65%), Query Frame = 1 
Query:  124 LLLEVFSSLPEPDSIYGVPAPAADLSAQATVYAHEGGWENTLPAYDTLLQSEHQRPPLAXXXXXXXXXXXXXXLLLPPGIG-----------LQTGVAASLQRMGLRHVLEHYLRGLRVGPASLRGLPDLDGDLRDMQFESAWRMSEWD 537
            LL+E F+ + EPDSIYG+   A ++++Q   Y HEG W + L  YD L++S  +                   +L  P +            +  G+  SLQ+ G  HVL+ Y +GL    A L+     D +  D+Q+E+AWR   WD
Sbjct:   33 LLVEAFTHINEPDSIYGITL-ANEVASQIIRYEHEGNWSSALEYYDLLVRSTPKE----------NLANFAGTVLTGPSVSSKAEENLLNWKMHKGLMRSLQKTGCSHVLDIYSQGLTNQKACLQQ----DSEFVDIQYEAAWRAGNWD 166
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15932.4062.1 vs. uniprot
Match: A0A452ZIH9_AEGTS (Non-specific serine/threonine protein kinase n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452ZIH9_AEGTS)

HSP 1 Score: 74.3 bits (181), Expect = 3.640e-12
Identity = 47/149 (31.54%), Postives = 71/149 (47.65%), Query Frame = 1 
Query:  124 LLLEVFSSLPEPDSIYGVPAPAADLSAQATVYAHEGGWENTLPAYDTLLQSEHQRPPLAXXXXXXXXXXXXXXLLLPPGIG-----------LQTGVAASLQRMGLRHVLEHYLRGLRVGPASLRGLPDLDGDLRDMQFESAWRMSEWD 537
            LL+E F+ + EPDSIYG+   A ++++Q   Y HEG W + L  YD L++S  +                   +L  P +            +  G+  SLQ+ G  HVL+ Y +GL    A L+     D +  D+Q+E+AWR   WD
Sbjct:  803 LLVEAFTHINEPDSIYGITL-ANEVASQIIRYEHEGNWSSALEYYDLLVRSTPKE----------NLANFAGTVLTGPSVSSKAEENLLNWKMHKGLMRSLQKTGCSHVLDIYSQGLTNQKACLQQ----DSEFVDIQYEAAWRAGNWD 936
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15932.4062.1 vs. uniprot
Match: A0A3B5Z1G6_WHEAT (Non-specific serine/threonine protein kinase n=7 Tax=Triticinae TaxID=1648030 RepID=A0A3B5Z1G6_WHEAT)

HSP 1 Score: 74.3 bits (181), Expect = 3.700e-12
Identity = 47/149 (31.54%), Postives = 71/149 (47.65%), Query Frame = 1 
Query:  124 LLLEVFSSLPEPDSIYGVPAPAADLSAQATVYAHEGGWENTLPAYDTLLQSEHQRPPLAXXXXXXXXXXXXXXLLLPPGIG-----------LQTGVAASLQRMGLRHVLEHYLRGLRVGPASLRGLPDLDGDLRDMQFESAWRMSEWD 537
            LL+E F+ + EPDSIYG+   A ++++Q   Y HEG W + L  YD L++S  +                   +L  P +            +  G+  SLQ+ G  HVL+ Y +GL    A L+     D +  D+Q+E+AWR   WD
Sbjct: 1454 LLVEAFTHINEPDSIYGITL-ANEVASQIIRYEHEGNWSSALEYYDLLVRSTPKE----------NLANFAGTVLTGPSVSSKAEENLLNWKMHKGLMRSLQKTGCSHVLDIYSQGLTNQKACLQQ----DSEFVDIQYEAAWRAGNWD 1587
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15932.4062.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNB7_ECTSI6.640e-8196.05Non-specific serine/threonine protein kinase n=1 T... [more]
A0A6H5KI56_9PHAE1.390e-3398.51Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A5J4Y5R1_9CHLO8.040e-1334.21Non-specific serine/threonine protein kinase (Frag... [more]
UPI00145535D72.010e-1230.67serine-protein kinase ATM-like n=1 Tax=Asterias ru... [more]
A0A452ZII9_AEGTS3.230e-1231.54Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
A0A452ZIK8_AEGTS3.360e-1231.54Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
A0A452ZIL7_AEGTS3.450e-1231.54Uncharacterized protein n=2 Tax=Aegilops tauschii ... [more]
A0A452ZIJ7_AEGTS3.470e-1231.54Non-specific serine/threonine protein kinase n=3 T... [more]
A0A452ZIH9_AEGTS3.640e-1231.54Non-specific serine/threonine protein kinase n=1 T... [more]
A0A3B5Z1G6_WHEAT3.700e-1231.54Non-specific serine/threonine protein kinase n=7 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15932contigE-fasciculatus_F_contig15932:658..1601 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score271.6
Seed ortholog evalue2.8e-70
Seed eggNOG ortholog2880.D8LNB7
Preferred nameATM
KEGG koko:K04728
KEGG Pathwayko01524,ko03440,ko04064,ko04068,ko04110,ko04115,ko04210,ko04214,ko04218,ko05165,ko05166,ko05202,ko05206,map01524,map03440,map04064,map04068,map04110,map04115,map04210,map04214,map04218,map05165,map05166,map05202,map05206
KEGG ModuleM00295,M00691
GOsGO:0000003,GO:0000075,GO:0000077,GO:0000278,GO:0000280,GO:0000706,GO:0000723,GO:0000724,GO:0000725,GO:0000726,GO:0000729,GO:0000956,GO:0001541,GO:0001666,GO:0001756,GO:0001775,GO:0001894,GO:0001895,GO:0001932,GO:0001934,GO:0002200,GO:0002327,GO:0002329,GO:0002331,GO:0002376,GO:0002377,GO:0002440,GO:0002520,GO:0002521,GO:0002562,GO:0002682,GO:0002683,GO:0002694,GO:0002695,GO:0003002,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004677,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005819,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006302,GO:0006303,GO:0006310,GO:0006325,GO:0006342,GO:0006348,GO:0006355,GO:0006401,GO:0006402,GO:0006403,GO:0006464,GO:0006468,GO:0006629,GO:0006644,GO:0006650,GO:0006661,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0006975,GO:0006977,GO:0006996,GO:0007049,GO:0007050,GO:0007059,GO:0007088,GO:0007093,GO:0007094,GO:0007095,GO:0007127,GO:0007131,GO:0007140,GO:0007143,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007346,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007507,GO:0007548,GO:0007568,GO:0007569,GO:0008150,GO:0008152,GO:0008219,GO:0008285,GO:0008334,GO:0008340,GO:0008406,GO:0008585,GO:0008610,GO:0008630,GO:0008654,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009314,GO:0009410,GO:0009628,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009952,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009994,GO:0010033,GO:0010165,GO:0010212,GO:0010243,GO:0010259,GO:0010332,GO:0010389,GO:0010468,GO:0010506,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010629,GO:0010638,GO:0010639,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0010942,GO:0010948,GO:0010965,GO:0010972,GO:0012501,GO:0014070,GO:0014074,GO:0015630,GO:0016043,GO:0016070,GO:0016071,GO:0016233,GO:0016301,GO:0016303,GO:0016310,GO:0016444,GO:0016458,GO:0016569,GO:0016570,GO:0016572,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019222,GO:0019439,GO:0019538,GO:0019637,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030071,GO:0030097,GO:0030098,GO:0030154,GO:0030163,GO:0030183,GO:0030258,GO:0030330,GO:0030717,GO:0030888,GO:0030889,GO:0031000,GO:0031056,GO:0031058,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031334,GO:0031347,GO:0031348,GO:0031399,GO:0031401,GO:0031503,GO:0031570,GO:0031571,GO:0031572,GO:0031577,GO:0031974,GO:0031981,GO:0032006,GO:0032007,GO:0032200,GO:0032204,GO:0032205,GO:0032206,GO:0032210,GO:0032212,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032944,GO:0032945,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033127,GO:0033129,GO:0033151,GO:0033554,GO:0034350,GO:0034351,GO:0034397,GO:0034641,GO:0034645,GO:0034655,GO:0035004,GO:0035173,GO:0035264,GO:0035282,GO:0035556,GO:0035825,GO:0036092,GO:0036211,GO:0036270,GO:0036289,GO:0036293,GO:0040007,GO:0040029,GO:0042113,GO:0042127,GO:0042157,GO:0042159,GO:0042221,GO:0042325,GO:0042327,GO:0042493,GO:0042592,GO:0042770,GO:0042981,GO:0043009,GO:0043030,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043279,GO:0043412,GO:0043516,GO:0043517,GO:0043523,GO:0043525,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044446,GO:0044464,GO:0044703,GO:0044773,GO:0044774,GO:0044783,GO:0044818,GO:0044819,GO:0044877,GO:0045017,GO:0045088,GO:0045132,GO:0045137,GO:0045141,GO:0045143,GO:0045321,GO:0045494,GO:0045786,GO:0045787,GO:0045814,GO:0045824,GO:0045839,GO:0045841,GO:0045892,GO:0045930,GO:0045934,GO:0045935,GO:0045937,GO:0046474,GO:0046483,GO:0046486,GO:0046488,GO:0046545,GO:0046649,GO:0046660,GO:0046700,GO:0046777,GO:0046834,GO:0046854,GO:0046983,GO:0047485,GO:0048232,GO:0048285,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048538,GO:0048583,GO:0048584,GO:0048585,GO:0048589,GO:0048599,GO:0048608,GO:0048609,GO:0048646,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048871,GO:0050000,GO:0050670,GO:0050672,GO:0050776,GO:0050777,GO:0050789,GO:0050794,GO:0050864,GO:0050865,GO:0050866,GO:0050869,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051247,GO:0051249,GO:0051250,GO:0051252,GO:0051253,GO:0051276,GO:0051303,GO:0051321,GO:0051402,GO:0051409,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0052742,GO:0060249,GO:0060255,GO:0060322,GO:0060429,GO:0060548,GO:0061053,GO:0061458,GO:0061982,GO:0061988,GO:0065007,GO:0065008,GO:0070013,GO:0070192,GO:0070482,GO:0070663,GO:0070664,GO:0070727,GO:0070997,GO:0071044,GO:0071156,GO:0071158,GO:0071173,GO:0071174,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071481,GO:0071500,GO:0071704,GO:0071840,GO:0072331,GO:0072359,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072425,GO:0072431,GO:0072434,GO:0080090,GO:0080134,GO:0080135,GO:0090068,GO:0090220,GO:0090304,GO:0090399,GO:0090407,GO:0097190,GO:0097193,GO:0097694,GO:0097695,GO:0098813,GO:0104004,GO:0140013,GO:0140096,GO:1900034,GO:1901214,GO:1901215,GO:1901216,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901698,GO:1901796,GO:1901798,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1902275,GO:1902400,GO:1902402,GO:1902403,GO:1902531,GO:1902532,GO:1902533,GO:1902679,GO:1902749,GO:1902750,GO:1902806,GO:1902807,GO:1903046,GO:1903047,GO:1903432,GO:1903506,GO:1903507,GO:1903624,GO:1903626,GO:1903978,GO:1904262,GO:1904353,GO:1904354,GO:1904356,GO:1904358,GO:1904882,GO:1904884,GO:1905269,GO:1905818,GO:1905819,GO:1905843,GO:1990164,GO:1990391,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2000278,GO:2000573,GO:2000816,GO:2001020,GO:2001022,GO:2001141,GO:2001228,GO:2001251,GO:2001252
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0892@1,KOG0892@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03032,ko03400
Hectar predicted targeting categoryother localisation
Exons2
Model size550
Cds size549
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928062.5136468-CDS-E-fasciculatus_F_contig15932:657..8101622928062.5136468-CDS-E-fasciculatus_F_contig15932:657..810Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15932 658..810 -
1695995807.5120225-CDS-E-fasciculatus_F_contig15932:657..8101695995807.5120225-CDS-E-fasciculatus_F_contig15932:657..810Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15932 658..810 -
1622928062.5709395-CDS-E-fasciculatus_F_contig15932:1205..16011622928062.5709395-CDS-E-fasciculatus_F_contig15932:1205..1601Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15932 1206..1601 -
1695995807.5254486-CDS-E-fasciculatus_F_contig15932:1205..16011695995807.5254486-CDS-E-fasciculatus_F_contig15932:1205..1601Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15932 1206..1601 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15932.4062.1prot_E-fasciculatus_F_contig15932.4062.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig15932 658..1601 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig15932.4062.1

>prot_E-fasciculatus_F_contig15932.4062.1 ID=prot_E-fasciculatus_F_contig15932.4062.1|Name=mRNA_E-fasciculatus_F_contig15932.4062.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=183bp
GDGLDGGGGNGQQLADEEEEDAWGVGAGAARGGREKREVERLLLEVFSSL
PEPDSIYGVPAPAADLSAQATVYAHEGGWENTLPAYDTLLQSEHQRPPLA
AGAGGGGGGGSAGSLLLPPGIGLQTGVAASLQRMGLRHVLEHYLRGLRVG
PASLRGLPDLDGDLRDMQFESAWRMSEWDPALS
back to top

mRNA from alignment at E-fasciculatus_F_contig15932:658..1601-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig15932.4062.1 ID=mRNA_E-fasciculatus_F_contig15932.4062.1|Name=mRNA_E-fasciculatus_F_contig15932.4062.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=944bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15932:658..1601- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGCGACGGGTTAGACGGGGGCGGAGGCAACGGGCAGCAGCTCGCCGACGA
AGAAGAAGAAGACGCGTGGGGGGTCGGGGCCGGAGCGGCGCGAGGAGGTA
GGGAGAAGAGAGAGGTGGAGCGGCTGCTCTTGGAGGTGTTCTCGAGCCTG
CCCGAGCCGGACAGCATCTACGGGGTGCCGGCGCCCGCGGCCGACCTCTC
CGCGCAGGCGACCGTGTACGCTCACGAGGGAGGGTGGGAGAACACCCTCC
CGGCGTACGACACGCTCTTGCAGAGCGAGCACCAGCGGCCACCGTTGGCC
GCGGGGGCGGGAGGAGGGGGTGGCGGCGGCAGCGCTGGGTCGCTGCTGCT
ACCACCGGGTATCGGCCTGCAGACGGGCGTTGCCGCGTCTCTTCAGGTGC
TTGCTGCATGGAGGTTTGAGATACTGGGGCGAGCGGTGGTACGGTAGCTC
GTCGTGACCACCTTATTCATGTATATGTGGGGCAACCTCCTTGTTTCAGA
GCATACAACAAAGATGACTGTTCTTTCTCTCAGTGGCAAGAGGGTTTGGG
CGCACCTTCTGTCGGGCAACCGCGTTTTTCGGAATTATTATTGAGACTGC
CGGACCCCCCACTGCTGTACTTTTTGTCGGGCGCAGGGTTTGCTGTTGGC
TCGTTGTCGAAGGTCTCTCGGTCAGCGAACGTAAAGCAACAGCCGCCCAA
ACCAACCTCCTTTTATTCTCTAGTCTCTTATCGCCTTGTTCTACGCTGCC
TTTCACTATCCGTTTCCAACAACAACGACCTGCGAAAAAAGCGCATGGGT
CTGCGGCACGTGCTCGAGCACTATCTGCGGGGCCTCCGCGTCGGGCCTGC
GTCTCTCCGCGGCCTGCCCGACCTAGACGGCGACCTGCGCGACATGCAGT
TCGAGTCCGCCTGGAGGATGTCCGAGTGGGATCCGGCTCTGTCG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15932:658..1601-

>mRNA_E-fasciculatus_F_contig15932.4062.1 ID=mRNA_E-fasciculatus_F_contig15932.4062.1|Name=mRNA_E-fasciculatus_F_contig15932.4062.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1098bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15932:658..1601- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGCGACGGGTTAGACGGGGGCGGAGGCAACGGGCAGCAGCTCGCCGACGA
AGAAGAAGAAGACGCGTGGGGGGTCGGGGCCGGAGCGGCGCGAGGAGGTA
GGGAGAAGAGAGAGGTGGAGCGGCTGCTCTTGGAGGTGTTCTCGAGCCTG
CCCGAGCCGGACAGCATCTACGGGGTGCCGGCGCCCGCGGCCGACCTCTC
CGCGCAGGCGACCGTGTACGCTCACGAGGGAGGGTGGGAGAACACCCTCC
CGGCGTACGACACGCTCTTGCAGAGCGAGCACCAGCGGCCACCGTTGGCC
GCGGGGGCGGGAGGAGGGGGTGGCGGCGGCAGCGCTGGGTCGCTGCTGCT
ACCACCGGGTATCGGCCTGCAGACGGGCGTTGCCGCGTCTCTTCAGGGCG
ACGGGTTAGACGGGGGCGGAGGCAACGGGCAGCAGCTCGCCGACGAAGAA
GAAGAAGACGCGTGGGGGGTCGGGGCCGGAGCGGCGCGAGGAGGTAGGGA
GAAGAGAGAGGTGGAGCGGCTGCTCTTGGAGGTGTTCTCGAGCCTGCCCG
AGCCGGACAGCATCTACGGGGTGCCGGCGCCCGCGGCCGACCTCTCCGCG
CAGGCGACCGTGTACGCTCACGAGGGAGGGTGGGAGAACACCCTCCCGGC
GTACGACACGCTCTTGCAGAGCGAGCACCAGCGGCCACCGTTGGCCGCGG
GGGCGGGAGGAGGGGGTGGCGGCGGCAGCGCTGGGTCGCTGCTGCTACCA
CCGGGTATCGGCCTGCAGACGGGCGTTGCCGCGTCTCTTCAGCGCATGGG
TCTGCGGCACGTGCTCGAGCACTATCTGCGGGGCCTCCGCGTCGGGCCTG
CGTCTCTCCGCGGCCTGCCCGACCTAGACGGCGACCTGCGCGACATGCAG
TTCGAGTCCGCCTGGAGGATGTCCGAGTGGGATCCGGCTCTGTCGCGCAT
GGGTCTGCGGCACGTGCTCGAGCACTATCTGCGGGGCCTCCGCGTCGGGC
CTGCGTCTCTCCGCGGCCTGCCCGACCTAGACGGCGACCTGCGCGACATG
CAGTTCGAGTCCGCCTGGAGGATGTCCGAGTGGGATCCGGCTCTGTCG
back to top