mRNA_E-fasciculatus_F_contig1592.4056.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1592.4056.1 vs. uniprot
Match: D7G198_ECTSI (ZIP divalent metal transporters n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G198_ECTSI) HSP 1 Score: 205 bits (521), Expect = 2.040e-64 Identity = 104/109 (95.41%), Postives = 107/109 (98.17%), Query Frame = 1
Query: 1 PAESVALLVSFLKSGLSERQVIKYLSIFSCLGPAGLGLGIAISEFAGKLADAIMVAMAAGTFIYVGATEVIPEEFESPHDKWRKFSALAAGIVIIAYVTHWAESLEHMA 327
PAES+ALLVSFLKSGLSERQVIKYLSIFSCLGPAGLGLGIAISEFAGKLADA+MVAMAAGTFIYVGATEVI EEFESPHDKW+KFSAL AGIVIIAYVTHWAESLEHMA
Sbjct: 168 PAESLALLVSFLKSGLSERQVIKYLSIFSCLGPAGLGLGIAISEFAGKLADAVMVAMAAGTFIYVGATEVIAEEFESPHDKWKKFSALTAGIVIIAYVTHWAESLEHMA 276
BLAST of mRNA_E-fasciculatus_F_contig1592.4056.1 vs. uniprot
Match: A0A6H5KF67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF67_9PHAE) HSP 1 Score: 199 bits (506), Expect = 6.930e-61 Identity = 101/109 (92.66%), Postives = 104/109 (95.41%), Query Frame = 1
Query: 1 PAESVALLVSFLKSGLSERQVIKYLSIFSCLGPAGLGLGIAISEFAGKLADAIMVAMAAGTFIYVGATEVIPEEFESPHDKWRKFSALAAGIVIIAYVTHWAESLEHMA 327
PAES+ALLVSFLKSGLSERQVIKYLSIFSCLGPAGLGLGIAISEF GKLADA+MVAMAAGTFIYVGATEVI EEFESPHDKW+KF AL AGI IIAYVTHWAESLEHMA
Sbjct: 272 PAESLALLVSFLKSGLSERQVIKYLSIFSCLGPAGLGLGIAISEFTGKLADAVMVAMAAGTFIYVGATEVIAEEFESPHDKWKKFFALTAGIFIIAYVTHWAESLEHMA 380
BLAST of mRNA_E-fasciculatus_F_contig1592.4056.1 vs. uniprot
Match: A0A836CLP2_9STRA (ZIP divalent metal transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLP2_9STRA) HSP 1 Score: 151 bits (381), Expect = 1.580e-43 Identity = 67/109 (61.47%), Postives = 94/109 (86.24%), Query Frame = 1
Query: 1 PAESVALLVSFLKSGLSERQVIKYLSIFSCLGPAGLGLGIAISEFAGKLADAIMVAMAAGTFIYVGATEVIPEEFESPHDKWRKFSALAAGIVIIAYVTHWAESLEHMA 327
PAES+ALLVSFLK+GL + +++K L++FSC+GP G+GLG+A +++AG L DA++V++AAGTF+YVGATEV+ +EFE+PH KW+KF+AL G+V+IAY+T WAE LE A
Sbjct: 144 PAESLALLVSFLKTGLPQGKIVKMLALFSCVGPLGVGLGVAAAQYAGDLVDAVLVSLAAGTFVYVGATEVVADEFETPHHKWKKFAALLGGVVLIAYITSWAELLEGRA 252
BLAST of mRNA_E-fasciculatus_F_contig1592.4056.1 vs. uniprot
Match: A0A7S2UZ24_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ24_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.030e-39 Identity = 65/107 (60.75%), Postives = 87/107 (81.31%), Query Frame = 1
Query: 1 PAESVALLVSFLKSGLSERQVIKYLSIFSCLGPAGLGLGIAISEFAGKLADAIMVAMAAGTFIYVGATEVIPEEFESPHDKWRKFSALAAGIVIIAYVTHWAESLEH 321
PAES+ALLVSFLKSGL ++++IK LS+FS +GP GL +G+ ++EFAGK+ DAI+VA+ +GTFIYVGATEVI EEFE+P KW+KF+AL GI+ IA++T+ H
Sbjct: 47 PAESIALLVSFLKSGLPQKEIIKMLSVFSLVGPLGLLIGLGVNEFAGKIVDAILVAITSGTFIYVGATEVIAEEFETPTHKWKKFAALMTGIISIAFITNATHDFHH 153
BLAST of mRNA_E-fasciculatus_F_contig1592.4056.1 vs. uniprot
Match: A0A7S0AIK4_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AIK4_9STRA) HSP 1 Score: 132 bits (332), Expect = 4.830e-37 Identity = 62/106 (58.49%), Postives = 85/106 (80.19%), Query Frame = 1
Query: 1 PAESVALLVSFLKSGLSERQVIKYLSIFSCLGPAGLGLGIAISEFAGKLADAIMVAMAAGTFIYVGATEVIPEEFESPHDKWRKFSALAAGIVIIAYVTHWAESLE 318
PAES+ALLV+FLKSG+ + +++K+LS+FS +GP G+G+G+A+ EFA + DAIM+A+ AGTFIYVGATEVIPEE+E KW+KF AL +GIV I ++T + SL
Sbjct: 72 PAESIALLVAFLKSGMPKGEIVKFLSVFSLMGPIGVGIGMAVHEFAAPIVDAIMLAVVAGTFIYVGATEVIPEEWEDQEHKWKKFFALMSGIVSIFFITQYTMSLS 177
BLAST of mRNA_E-fasciculatus_F_contig1592.4056.1 vs. uniprot
Match: A0A7S2HAN0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HAN0_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.010e-36 Identity = 62/108 (57.41%), Postives = 86/108 (79.63%), Query Frame = 1
Query: 1 PAESVALLVSFLKSGLSERQVIKYLSIFSCLGPAGLGLGIAISEFAGKLADAIMVAMAAGTFIYVGATEVIPEEFESPHDKWRKFSALAAGIVIIAYVTHWAESLEHM 324
PAES+ALLV+FLKSG+ + ++I++LS+FSC+GP G+ LG+A++EFA + D+IM+A AGTF+YVGATEVIPEE+E KW+KF AL +GIV I +T + +LE M
Sbjct: 96 PAESIALLVAFLKSGMPKGEIIRFLSVFSCMGPIGVALGMAVNEFAAPIVDSIMLATVAGTFVYVGATEVIPEEWEEQEHKWKKFLALMSGIVSIFAITQYTMTLEGM 203
BLAST of mRNA_E-fasciculatus_F_contig1592.4056.1 vs. uniprot
Match: A0A1Z5JFF0_FISSO (Solute carrier family 39 (Zinc transporter), member 1/2/3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JFF0_FISSO) HSP 1 Score: 137 bits (344), Expect = 1.860e-36 Identity = 66/105 (62.86%), Postives = 84/105 (80.00%), Query Frame = 1
Query: 1 PAESVALLVSFLKSGLSERQVIKYLSIFSCLGPAGLGLGIAISEFAGKLADAIMVAMAAGTFIYVGATEVIPEEFESPHDKWRKFSALAAGIVIIAYVTHWAESL 315
PAES+ALLV+FLKSG+ E QV+KYLSIFSC+GP G+ LG+A+SE+A + D+IM+A+ AGTF+YVGATEVIPEE+E H KW KF+AL GI I +T + SL
Sbjct: 307 PAESIALLVAFLKSGMPEDQVLKYLSIFSCMGPIGVALGMAVSEYAAPIVDSIMLAVVAGTFVYVGATEVIPEEWEDGHHKWAKFAALMGGIGSILVITQYTASL 411
BLAST of mRNA_E-fasciculatus_F_contig1592.4056.1 vs. uniprot
Match: A0A7R9ZDF8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZDF8_9STRA) HSP 1 Score: 129 bits (324), Expect = 4.410e-36 Identity = 62/106 (58.49%), Postives = 82/106 (77.36%), Query Frame = 1
Query: 1 PAESVALLVSFLKSGLSERQVIKYLSIFSCLGPAGLGLGIAISEFAGKLADAIMVAMAAGTFIYVGATEVIPEEFESPHDKWRKFSALAAGIVIIAYVTHWAESLE 318
PAES+ALLV+FLKSG+ + +IKYLS FS +GP G+ LG+A+ EFA + DA+M+A+ AGTF+YVGATEVIPEE+E KW+KF +L AGIV + VT + +LE
Sbjct: 51 PAESIALLVAFLKSGMPKPLIIKYLSAFSAMGPCGVALGMAVQEFAAPVVDAVMLAVVAGTFVYVGATEVIPEEWEEQEHKWKKFGSLLAGIVSVFAVTQYTMTLE 156
BLAST of mRNA_E-fasciculatus_F_contig1592.4056.1 vs. uniprot
Match: A0A7S1YY76_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YY76_TRICV) HSP 1 Score: 134 bits (337), Expect = 1.700e-35 Identity = 62/106 (58.49%), Postives = 87/106 (82.08%), Query Frame = 1
Query: 1 PAESVALLVSFLKSGLSERQVIKYLSIFSCLGPAGLGLGIAISEFAGKLADAIMVAMAAGTFIYVGATEVIPEEFESPHDKWRKFSALAAGIVIIAYVTHWAESLE 318
PAES+ALLV+FLKSG+ + Q+++YLSIFS +GP G+ +G+A++EFA + DAIM+A+ AGTF+YVGATEVIPEE+E P KW+KF+AL +GIV I +T + +L+
Sbjct: 298 PAESIALLVAFLKSGMPKPQIVQYLSIFSAMGPVGVAIGMAVNEFAAPIVDAIMLAIVAGTFVYVGATEVIPEEWEEPDHKWKKFAALISGIVSIFAITQYTMTLD 403
BLAST of mRNA_E-fasciculatus_F_contig1592.4056.1 vs. uniprot
Match: B5Y3R5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3R5_PHATC) HSP 1 Score: 134 bits (338), Expect = 1.920e-35 Identity = 64/105 (60.95%), Postives = 86/105 (81.90%), Query Frame = 1
Query: 1 PAESVALLVSFLKSGLSERQVIKYLSIFSCLGPAGLGLGIAISEFAGKLADAIMVAMAAGTFIYVGATEVIPEEFESPHDKWRKFSALAAGIVIIAYVTHWAESL 315
PAES+ALLV+FLKSG+ E Q+I+YLSIFSC+GP G+ LG+A++EFA + D++M+A+ AGTF+YVGATEVIPEE+E KW+KF+AL +GIV I +T + SL
Sbjct: 327 PAESIALLVAFLKSGVPEAQIIQYLSIFSCMGPIGVALGMAVNEFAAPIVDSMMLAVVAGTFVYVGATEVIPEEWEDSTHKWKKFAALMSGIVSIFVITQYTMSL 431 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1592.4056.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1592.4056.1 >prot_E-fasciculatus_F_contig1592.4056.1 ID=prot_E-fasciculatus_F_contig1592.4056.1|Name=mRNA_E-fasciculatus_F_contig1592.4056.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=110bp PAESVALLVSFLKSGLSERQVIKYLSIFSCLGPAGLGLGIAISEFAGKLAback to top mRNA from alignment at E-fasciculatus_F_contig1592:15517..17180- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1592.4056.1 ID=mRNA_E-fasciculatus_F_contig1592.4056.1|Name=mRNA_E-fasciculatus_F_contig1592.4056.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1664bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1592:15517..17180- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1592:15517..17180- >mRNA_E-fasciculatus_F_contig1592.4056.1 ID=mRNA_E-fasciculatus_F_contig1592.4056.1|Name=mRNA_E-fasciculatus_F_contig1592.4056.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=660bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1592:15517..17180- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |