prot_E-fasciculatus_F_contig1592.4054.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1592.4054.1
Unique Nameprot_E-fasciculatus_F_contig1592.4054.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length117
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1592.4054.1 vs. uniprot
Match: D7G1A0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1A0_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 2.140e-66
Identity = 101/116 (87.07%), Postives = 103/116 (88.79%), Query Frame = 0 
Query:    1 LASARPPLSPCRVAAAVGRKSWATSATKRGNNNNIDDDDGDRIDMLTGSGLRGVDTSKLTGNEKRDADWFLRTNSRELVWFEDPVFYLGLCLIVPVVGLVWGVLNCYIPGICPSTL 116
            +ASA PP  PCRVAAA  R SWATSATKRG      DDDGDRIDMLTGSGLRGVDTSKLTGNEKRDADWFLRTNSRELVWFEDPVFYLGLCLIVPVVGLVWG LNCY+PGICPSTL
Sbjct:    1 MASAGPPFFPCRVAAAAERSSWATSATKRGKEG---DDDGDRIDMLTGSGLRGVDTSKLTGNEKRDADWFLRTNSRELVWFEDPVFYLGLCLIVPVVGLVWGALNCYVPGICPSTL 113
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BLAST of mRNA_E-fasciculatus_F_contig1592.4054.1 vs. uniprot
Match: A0A6H5KI54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI54_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 1.890e-65
Identity = 101/116 (87.07%), Postives = 104/116 (89.66%), Query Frame = 0 
Query:    1 LASARPPLSPCRVAAAVGRKSWATSATKRGNNNNIDDDDGDRIDMLTGSGLRGVDTSKLTGNEKRDADWFLRTNSRELVWFEDPVFYLGLCLIVPVVGLVWGVLNCYIPGICPSTL 116
            LASA PP  PCRVAAA  R SWAT ATKRGN +N DDDD DRIDMLTGSGLRGVDTSKLTGNEKRDADWFLRTNSRELVWFEDPVFYLGLCLIVPVVGLVWG  NCY+PGICP+TL
Sbjct:   55 LASAGPPFFPCRVAAAAERNSWATRATKRGNTSN-DDDDIDRIDMLTGSGLRGVDTSKLTGNEKRDADWFLRTNSRELVWFEDPVFYLGLCLIVPVVGLVWGAFNCYVPGICPATL 169
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1592.4054.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1A0_ECTSI2.140e-6687.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KI54_9PHAE1.890e-6587.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 109..116
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..84
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..108
NoneNo IPR availableTMHMMTMhelixcoord: 86..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1592contigE-fasciculatus_F_contig1592:9801..10151 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1592.4054.1mRNA_E-fasciculatus_F_contig1592.4054.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1592 9801..10151 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1592.4054.1 ID=prot_E-fasciculatus_F_contig1592.4054.1|Name=mRNA_E-fasciculatus_F_contig1592.4054.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=117bp
LASARPPLSPCRVAAAVGRKSWATSATKRGNNNNIDDDDGDRIDMLTGSG
LRGVDTSKLTGNEKRDADWFLRTNSRELVWFEDPVFYLGLCLIVPVVGLV
WGVLNCYIPGICPSTL*
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