prot_E-fasciculatus_F_contig15907.4047.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15907.4047.1
Unique Nameprot_E-fasciculatus_F_contig15907.4047.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length61
Homology
BLAST of mRNA_E-fasciculatus_F_contig15907.4047.1 vs. uniprot
Match: D7FLL5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLL5_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 6.580e-30
Identity = 57/60 (95.00%), Postives = 59/60 (98.33%), Query Frame = 0
Query:    1 RYQVDIDLKKTVDESALKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 60
            RYQVDIDLKK VDE+A+KASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF
Sbjct:  103 RYQVDIDLKKAVDETAIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 162          
BLAST of mRNA_E-fasciculatus_F_contig15907.4047.1 vs. uniprot
Match: A0A836CBN1_9STRA (60S ribosomal protein L27 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN1_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.010e-17
Identity = 41/60 (68.33%), Postives = 48/60 (80.00%), Query Frame = 0
Query:    1 RYQVDIDLKKTVDESALKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 60
            RY  DI+LK  V+ESA KAS  +VRKAV+K+FEERYLNQ  +KSEKKA+G KYFF KL F
Sbjct:   83 RYTADIELKTVVEESAFKASRPEVRKAVKKVFEERYLNQGQIKSEKKASGSKYFFAKLAF 142          
BLAST of mRNA_E-fasciculatus_F_contig15907.4047.1 vs. uniprot
Match: B8CDJ9_THAPS (60S ribosomal protein L27 n=2 Tax=Thalassiosira TaxID=35127 RepID=B8CDJ9_THAPS)

HSP 1 Score: 77.4 bits (189), Expect = 1.240e-16
Identity = 41/62 (66.13%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    1 RYQVDIDLKKTVDESALKASPT--DVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 60
            RYQVD+DLKK VDE+ L A+    +V+KA++KIFE+RYLNQK+V SEKKA G  YFF+KLRF
Sbjct:   84 RYQVDMDLKKAVDEADLLAADKKIEVKKALKKIFEDRYLNQKEVTSEKKAAGSSYFFQKLRF 145          
BLAST of mRNA_E-fasciculatus_F_contig15907.4047.1 vs. uniprot
Match: A0A7S1BL28_9STRA (60S ribosomal protein L27 n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BL28_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.800e-15
Identity = 40/67 (59.70%), Postives = 49/67 (73.13%), Query Frame = 0
Query:    1 RYQVDIDLKKTVDESALKASP-------TDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 60
            RYQVD+DLKK V E AL ++         D +KA++++FEERYLNQKDV SEKKA G  YFF+KLRF
Sbjct:   90 RYQVDMDLKKVVGEQALASTDGLRGDARVDAKKALKRVFEERYLNQKDVTSEKKAIGSNYFFKKLRF 156          
BLAST of mRNA_E-fasciculatus_F_contig15907.4047.1 vs. uniprot
Match: A0A7S2SP13_9STRA (60S ribosomal protein L27 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP13_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 2.810e-15
Identity = 39/62 (62.90%), Postives = 49/62 (79.03%), Query Frame = 0
Query:    1 RYQVDIDLKKTVDESAL--KASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 60
            RYQVD+DLKK VDE+ L  +    +V+K ++KIFE+RYLNQK+V SEKKA G  YFF+KLRF
Sbjct:   84 RYQVDMDLKKAVDEADLLNEEKKVEVKKNLKKIFEDRYLNQKNVTSEKKAAGSNYFFQKLRF 145          
BLAST of mRNA_E-fasciculatus_F_contig15907.4047.1 vs. uniprot
Match: A0A7S4SWS4_9DINO (60S ribosomal protein L27 (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SWS4_9DINO)

HSP 1 Score: 72.0 bits (175), Expect = 1.520e-14
Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    1 RYQVDIDLKKTVDESALKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYF 54
            RY VD+DLKKTVDE+A K +  + RK V+KIFE+RYLNQ   KSEKKA+GV+YF
Sbjct:   90 RYSVDMDLKKTVDEAAFKEAKKETRKTVKKIFEDRYLNQASGKSEKKASGVQYF 143          
BLAST of mRNA_E-fasciculatus_F_contig15907.4047.1 vs. uniprot
Match: A0A024GB05_9STRA (Uncharacterized protein n=3 Tax=Albugo TaxID=65356 RepID=A0A024GB05_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.100e-14
Identity = 37/62 (59.68%), Postives = 46/62 (74.19%), Query Frame = 0
Query:    1 RYQVDIDLKKTVDESALKA--SPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 60
            RY VDIDLKK +D+  +    S  + RK ++K+FEERYLNQ D  SEKKATGV +FF+KLRF
Sbjct:  113 RYIVDIDLKKVLDDDVMSKPESRVETRKTIKKVFEERYLNQADCSSEKKATGVSFFFKKLRF 174          
BLAST of mRNA_E-fasciculatus_F_contig15907.4047.1 vs. uniprot
Match: A0A6S8Z8U4_9STRA (60S ribosomal protein L27 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8Z8U4_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.250e-14
Identity = 39/62 (62.90%), Postives = 48/62 (77.42%), Query Frame = 0
Query:    1 RYQVDIDLKKTVDESALKASP--TDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 60
            RY VD+DLKKTVDE+ +K +    DV+K ++ IFE+RYLNQK V SEKKA G  YFF+KLRF
Sbjct:   84 RYVVDMDLKKTVDEADVKNAERKVDVKKNLKTIFEDRYLNQKAVTSEKKAAGSSYFFQKLRF 145          
BLAST of mRNA_E-fasciculatus_F_contig15907.4047.1 vs. uniprot
Match: A0A7S0FQ72_9STRA (60S ribosomal protein L27 n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FQ72_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.750e-14
Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 0
Query:    1 RYQVDIDLKKTVDESALKASP--TDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 60
            RY VD+DLKK VDE+ L ++    DV+K ++KIFE++YLNQK V SEKKA G  YFF+KLRF
Sbjct:   93 RYVVDMDLKKAVDEADLASAERKVDVKKGLKKIFEDKYLNQKAVTSEKKAAGSNYFFQKLRF 154          
BLAST of mRNA_E-fasciculatus_F_contig15907.4047.1 vs. uniprot
Match: A0A2D4BF17_PYTIN (60S ribosomal protein L27 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A2D4BF17_PYTIN)

HSP 1 Score: 71.2 bits (173), Expect = 3.110e-14
Identity = 39/63 (61.90%), Postives = 48/63 (76.19%), Query Frame = 0
Query:    1 RYQVDIDLKKTVDESALKASPT---DVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 60
            RY VDIDLKK +D+  L A+P    + RK ++K+FEERYLNQ  VKSEKKA GV +FF+KLRF
Sbjct:   83 RYVVDIDLKKVLDDEVL-ANPESRIESRKTIKKVFEERYLNQSAVKSEKKAAGVSFFFKKLRF 144          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15907.4047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLL5_ECTSI6.580e-3095.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CBN1_9STRA1.010e-1768.3360S ribosomal protein L27 n=1 Tax=Tribonema minus ... [more]
B8CDJ9_THAPS1.240e-1666.1360S ribosomal protein L27 n=2 Tax=Thalassiosira Ta... [more]
A0A7S1BL28_9STRA1.800e-1559.7060S ribosomal protein L27 n=2 Tax=Corethron hystri... [more]
A0A7S2SP13_9STRA2.810e-1562.9060S ribosomal protein L27 n=1 Tax=Rhizochromulina ... [more]
A0A7S4SWS4_9DINO1.520e-1466.6760S ribosomal protein L27 (Fragment) n=1 Tax=Alexa... [more]
A0A024GB05_9STRA2.100e-1459.68Uncharacterized protein n=3 Tax=Albugo TaxID=65356... [more]
A0A6S8Z8U4_9STRA2.250e-1462.9060S ribosomal protein L27 n=2 Tax=Ditylum brightwe... [more]
A0A7S0FQ72_9STRA2.750e-1461.2960S ribosomal protein L27 n=1 Tax=Minutocellus pol... [more]
A0A2D4BF17_PYTIN3.110e-1461.9060S ribosomal protein L27 n=3 Tax=Eukaryota TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001141Ribosomal protein L27ePFAMPF01777Ribosomal_L27ecoord: 1..60
e-value: 6.6E-9
score: 36.0
IPR038655Ribosomal protein L27e superfamilyGENE3D2.30.30.770coord: 1..60
e-value: 5.4E-8
score: 34.9
NoneNo IPR availablePRODOMPD009396coord: 1..60
e-value: 0.003
score: 90.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15907contigE-fasciculatus_F_contig15907:77..259 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15907.4047.1mRNA_E-fasciculatus_F_contig15907.4047.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15907 77..259 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15907.4047.1 ID=prot_E-fasciculatus_F_contig15907.4047.1|Name=mRNA_E-fasciculatus_F_contig15907.4047.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=61bp
RYQVDIDLKKTVDESALKASPTDVRKAVRKIFEERYLNQKDVKSEKKATG
VKYFFEKLRF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038655L27e_sf
IPR001141Ribosomal_L27e