mRNA_E-fasciculatus_F_contig159.4042.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig159.4042.1
Unique NamemRNA_E-fasciculatus_F_contig159.4042.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig159.4042.1 vs. uniprot
Match: D7G3S0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S0_ECTSI)

HSP 1 Score: 619 bits (1595), Expect = 8.010e-193
Identity = 363/635 (57.17%), Postives = 417/635 (65.67%), Query Frame = 2
Query: 1796 DVGGALKLGGSADIIECSFLSNVAYTRGLAVAVVDSASSNDSSFVGNQLSCAVGSYRSDTEEEETTARFEMVCFDCPDWEECSGCSIESGDVAPTCVVPLEHTSADKGGVTLETLSIDEGYWRATNESAIILACFNADACTGGETGAESFCASGYQGPYCNVCEPGYAPSLVAHTCCTRCSSSRHQGLMAAAAVAVVVAAFAIATFFSIY-------GVDGAWRW-VCGALPSKGTSSRSCPSIENHRRRVADFDPVR*RGQYYLSRRLPRLSERHRRSQLRPPFLARGRVLVVRLGLSPP-----TSRQYHGAVGCRWIVGDVILDCDAKKQRI--RRHCSSRANPP------QTSNGSPTLTFLVYSSVSSTVFQTFACETLDDGNEYIRADYRIHCTDAKHKAFEVYAGIMLAVYPVGIPLLYTVLLFRRRHVLADAGADKTVAQLVSGLWEPYRSERFYYEVVECARRVMLTGAVVFFFPNDAAQIAITMLMAVSFLVMFETLSPYKSESDIWLSRGGHVPVFLSMFDLLLLKVDESGERDQSQAIFAGVLVAGHVLMIIAIVAEVVGICYASGKKRVVRAAVSPQSPP*LSPSAE*DEVPAFEDSPASWRSFMAQKLVLEEPGPPRTVSG 3637
            DVGGA++LGG A                LAV VV+SAS +DS+F GNQLSC  G +RSDTE+E+  ARFE VC DCP W+EC  C I  G + PTC VPLEHTSAD+ G+TLETL +DEGYWRAT ES IILAC+NADAC GG+TGA+SFCASGYQGPYC VCE  Y+ SL AHTC   CSSSR +GL   AA+AV+V   A A  F          G+ G +R  V GA+P +  S +    +     + AD   V   G Y                     FL+   V+   +G         +   +H  +    I   V+    A    I  RRH +S           +       LTF+VYSSVSSTVFQTFACETLDD  EY+RADYRIHCTDAKHKAF+VYA IM+ VYPVGIPLLY +LLF+RRHVLADAGADKTVA  +SGLWEPYR ERFYYEVVEC RRVMLTG VVF FPNDAAQIAITML+   F ++FE LSPY+SESD+WLSRGGHV VFLSMFDLLLLKVD SGE + SQAIF+ V VAGHVLMI+ IV EVVGICYASGKKRVV AA S +S P L P A  D+VPA E  PASW SFM Q  V EE G P+   G
Sbjct: 1068 DVGGAMRLGGEATXXXXXXXXXXXXXXXLAVDVVESASIHDSTFNGNQLSCGKGWFRSDTEQEDPNARFETVCVDCPAWDECFECIIADGTITPTCEVPLEHTSADEDGLTLETLKLDEGYWRATTESVIILACYNADACAGGKTGADSFCASGYQGPYCAVCETDYSSSL-AHTC-KHCSSSRRRGLTVIAAIAVIVTVLAFAAVFQYMLSTEHEEGIFGCFRRRVLGAVPVE--SLKIIVVVWQILTQFADAANVTFPGLYQ-------------------DFLSAIDVINFDIGSVLAAGCLWSDMDFHDRLLVNTIGPLVVAGFLAMTYGIVIRRHSASADTGGLEKIYHKHQTALLFLTFVVYSSVSSTVFQTFACETLDDDVEYLRADYRIHCTDAKHKAFKVYAAIMIVVYPVGIPLLYALLLFQRRHVLADAGADKTVALSISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLITSFFSLLFEILSPYESESDMWLSRGGHVIVFLSMFDLLLLKVDVSGESNHSQAIFSRVFVAGHVLMILVIVVEVVGICYASGKKRVVGAASSSESSPGLRPRAGSDDVPALESVPASWASFMRQGSVSEEQGGPQAQEG 1679          
BLAST of mRNA_E-fasciculatus_F_contig159.4042.1 vs. uniprot
Match: A0A6H5J7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J9_9PHAE)

HSP 1 Score: 596 bits (1536), Expect = 1.890e-190
Identity = 370/719 (51.46%), Postives = 451/719 (62.73%), Query Frame = 2
Query: 1589 VAAYEIG-RIWPLTFSRCAFLGNVRGKPFEGYPFFQRPYFFVDGGCTTTT----EYV---FESYYLSVYRPARIVLPDVGGALKLGGSADIIECSFLSNVAYTRGLAVAVVDSASSNDSSFVGNQLSCAVGSYRSDTEEEETTARFEMVCFDCPDWEECSGCSIESGDVAPTCVVPLEHTSADKGGVTLETLSIDEGYWRATNESAIILACFNADACTGGETGAESFCASGYQGPY-----CNVCEPGYAPSLVAHTCCTRCSSSRHQGLMAAAAVAVVVAAFAIATFFSIYGVDGAWRWVCGALPSKGTSSRSCPSIENHRRRVADFDPVR*RGQYYLSRRLPRLSERHRRSQLRPP-----FLARGRVLVVRLG-------LSPPTS---RQYHGAVGCRWIVGDVILDCDAKKQRIRRHCSSRANPPQTSNGSP------TLTFLVYSSVSSTVFQTFACETLDDGNEYIRADYRIHCTDAKHKAFEVYAGIMLAVYPVGIPLLYTVLLFRRRHVLADAGADKTVAQLVSGLWEPYRSERFYYEVVECARRVMLTGAVVFFFPNDAAQIAITMLMAVSFLVMFETLSPYKSESDIWLSRGGHVPVFLSMFDLLLLKVDESGERDQSQAIFAGVLVAGHVLMIIAIVAEVVGICYASGKKRVVRAAVSPQSPP*LSPSAE*DEVPAFEDSPASWRSFMAQKLVLEEPGPPRTVSGTV 3643
            +AAY  G  ++P TFS C F  N   K   G            GG   T     E++   FE    S Y         VGGA++LGG+ D+  CSFLSN A +RGLA+AVV  A+ + +SF  N+L C  G YR DTE  E +ARFE VC DCP   EC  C +    V P C +PLEHT+A + G+TLETL I  GYWRAT+ES  ILAC+N DACTGG+TGA+SFCASGY GP      C+VCE G+APSL AHTC TRCSSSR QGL+A A +A +VA FAI T F         +++      +G +   C       RR+    PV+      +  ++  L++    + +  P     FL+   V+   LG       L P      R   G +G    VG +++     +  +RR+ ++    P  +           LTFL+YSSVSSTVFQTFACETLDDG EY+R DY IHCTDAKHKAFEVYAGIM+ VYPVGIPLLY +LLF+RR VL DA ADKTVAQ ++GLWEPYR ERFYYEV+EC RR+MLTG V F FPNDAAQIAITML+A  F ++FE +SPY SESD WLSRGGHV VFLSMFD LLLKVD S E +QSQ +FAGV VAGHVL+I+AIV EVVGIC ASGKKR V  AV  +  P L P    D+VP FE +PASW++F+ Q  V E+PGP R+ SG V
Sbjct:  430 IAAYVTGTELYPATFSGCKFFDN---KASGG-----------TGGAVETLSGRQEFISCDFEGN--SAY---------VGGAMRLGGTVDVRNCSFLSNSATSRGLAIAVVAFANISGASFDRNELYCEAGLYREDTEG-EPSARFETVCLDCP---ECDDCHVTRSSVTPACELPLEHTTAVEPGLTLETLDIHGGYWRATSESDKILACYNTDACTGGQTGADSFCASGYMGPCEEGEDCSVCETGFAPSL-AHTC-TRCSSSRRQGLLAVAVIAALVAVFAIVTIF---------KYLLSTEVDEGNAG--C-----FHRRILRAVPVQTLKIIVVVWQI--LTQFADVANITYPQAYQDFLSAIDVVNFDLGSALAAGCLWPDIDFHDRLLLGTLGPLVAVGFLVM---TYRVAVRRNGTAGGQTPADNTRHKHLSALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRVDYTIHCTDAKHKAFEVYAGIMVVVYPVGIPLLYAILLFQRRDVLGDARADKTVAQPIAGLWEPYRPERFYYEVIECGRRIMLTGVVAFIFPNDAAQIAITMLVAFFFSLVFEVMSPYTSESDTWLSRGGHVIVFLSMFDALLLKVDVSSESEQSQDVFAGVFVAGHVLLILAIVVEVVGICLASGKKRGVEEAVPSEGLPVLRPRGGSDDVPVFESAPASWKTFVGQASVSEKPGPRRSASGAV 1096          
BLAST of mRNA_E-fasciculatus_F_contig159.4042.1 vs. uniprot
Match: A0A6H5LAD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAD4_9PHAE)

HSP 1 Score: 573 bits (1477), Expect = 9.580e-186
Identity = 361/704 (51.28%), Postives = 429/704 (60.94%), Query Frame = 2
Query: 1541 TDLSFQNNRASYAGGVVAAYEIGRIWPLTFSRCAFLGNVRGKPFEGYPFFQRPYFFVDGGCTTTTEYVFESYYLSVYRPARIVLPDVGGALKLGGSADIIECSFLSNVAYTRGLAVAVVDSASSNDSSFVGNQLSCAVGSYRSDTEEEETTARFEMVCFDCPDWEECSGCSIESGDVAPTCVVPLEHTSADKGGVTLETLSIDEGYWRATNESAIILACFNADACTGGETGAESFCASGYQGPYCNVCEPGYAPSLVAHTCCTRCSSSRHQGLMAAAAVAVVVAAFAIATFF----SIYGVDGA-W---RWVCGALPSKGTSSRSCPSIENHRRRVADFDPVR*RGQYYLSRRLPRLSERHRRSQLRPPFLARGRVLVVRLGLSPPTSRQYHGAVGCRWIVGD-------------VILDCDAKKQRI--RRHCSS--RANPPQTSNGSPT----LTFLVYSSVSSTVFQTFACETLDDGNEYIRADYRIHCTDAKHKAFEVYAGIMLAVYPVGIPLLYTVLLFRRRHVLADAGADKTVAQLVSGLWEPYRSERFYYEVVECARRVMLTGAVVFFFPNDAAQIAITMLMAVSFLVMFETLSPYKSESDIWLSRGGHVPVFLSMFDLLLLKVDESGERDQSQAIFAGVLVAGHVLMIIAIVAEVVGICYASGKKRVVRAAVSPQSPP*LSPSAE*DEVPAFEDSP 3565
            TD  F NNRA   G V       +  P T S C F  NV  +            F +      T + +   Y    ++ A   LPDVGGA++ GG A + +C FL N+AY+RGLAV VV+S + N+S +  +Q      ++ +   +E+   RFE VC +CP W+EC  C+I  G V PTC VPLEHT+AD+ G+TLETL IDEGYWRAT ES IILA +NA+AC GG+TGA+SFCASGYQG YC VC+  Y+PSL AH C T CSSSR QGLM  AA+AV+V   A    F    S    +G  W   R V GA+P +  S +    +     + AD   V   G Y                     FL+   V+   +G           AVGC W   D             V+    A    I  RR+ +S       +  +   T    LTFLVYSSVSSTVFQTFACETLDD  EY+RADYRIHCTDAKHKAFEVYA IM+ VYPVGIPL Y  LLF+  H+LADAGADKTVA  +SGLWEPYR ERFYYE VEC RRV LTG VVF FPNDAAQIAITML+   F ++FE LSPY SESD+WLSRGGHV VFLS+FDL+LLKVD SGE DQSQA+F+GVL+AGHVLMI+ IV EVVGICYASG KRVV AA S +S P L P    D+ PAFE  P
Sbjct:   80 TDAVFINNRAGNGGAVYIYAGEFQDRPATISGCNFSNNVAEEAGGAVNTLAVSNFSLLVILRATRQLLIAPYTTGRHQSA---LPDVGGAMRPGGDATVSDCEFLDNIAYSRGLAVDVVESGNINNSRWSQSQ-----STFSALKMQEDPNVRFETVCLECPAWDECFECTIADGTVTPTCEVPLEHTAADEDGLTLETLKIDEGYWRATTESVIILASYNANACAGGKTGADSFCASGYQGTYCAVCKTDYSPSL-AHIC-THCSSSRRQGLMCIAAIAVIVTVLAFVAIFQYMLSTEHEEGILWCFRRRVLGAVPVQ--SLKIIVVVWQILTQFADTANVTYPGLYQ-------------------DFLSAIDVINFDIGSVL--------AVGCLWYEVDFHDRLLVNTIGPLVVAGFLAMTYGIVLRRYSASGGTGGVEKIRHKHQTALLFLTFLVYSSVSSTVFQTFACETLDDDVEYLRADYRIHCTDAKHKAFEVYAAIMIVVYPVGIPLFYAFLLFQHHHILADAGADKTVALSISGLWEPYRPERFYYEEVECGRRVNLTGVVVFIFPNDAAQIAITMLITSYFSLLFEILSPYGSESDMWLSRGGHVIVFLSIFDLVLLKVDVSGESDQSQAVFSGVLLAGHVLMILVIVVEVVGICYASGMKRVVGAASSSESSPGLRPRPGSDD-PAFESVP 743          
BLAST of mRNA_E-fasciculatus_F_contig159.4042.1 vs. uniprot
Match: A0A6H5KX12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX12_9PHAE)

HSP 1 Score: 574 bits (1480), Expect = 2.120e-182
Identity = 375/781 (48.02%), Postives = 447/781 (57.23%), Query Frame = 2
Query: 1460 SAATFINNSATNAGALFLSNSDYGFNFTDLSFQNNRASYAGGVVAAYEIGRIW---PLTFSRCAFLGNVRGKPFEGYPFFQRPYFFVDGGCTTTTEYVFESYYLSVYRPARIVLPDVGGALKLGGSADIIECSFLSNVAYTRGLAVAVVDSASSNDSSFVG-NQLSCAVGSYRSDTEEEETTARFEMVCFDCPDWEECSGCSIESGDVAPTCVVPLEHTSADKGGVTLETLSIDEGYWRATNESAIILACFNADACTGGETGAESFCASGYQGPYCNVCEPGYAPSLVAHTCCTRCSSSRHQGLMAAAAVAVVVAAFAIAT-----FFSIYGVDGAWRW----VCGALPSKGTSSRSC--PSIENHRRRVADFDPVR*RGQYYLSRRLPRLSERHRRSQLRPPFLARGRVLVVRLGLSPPTSRQYHGAV-------------GCRWIVGD-------------VILDCDAKKQRIRRH-CSSRANPPQTSN--------GSPTLTFLVYSSVSSTVFQTFACETLDDGNEYIRADYRIHCTDAKHKAFEVYAGIMLAVYPVGIPLLYTVLLFRRRHVLADAGAD-KTVAQLVSGLWEPYRSERFYYEVVECARRVMLTGAVVFFFPNDAAQIAITMLMAVSFLVMFETLSPYKSESDIWLSRGGHVPVFLSMFDLLLLKVDESGERDQSQAIFAGVLVAGHVLMIIAIVAEVVGICYASGKKRVVRA-AVSPQSPP*LSPSAE*DEVPAFEDSPASWRS-FMAQKLVLEEPGPPRTVSGTV 3643
            + ATFINN A   GAL+LS  +  FNF    F+NN A   GG VA Y+ G      P+ F  C FL NV                  +GG   T     +  ++S          DVGGA++LGGSA +                                 N L+CAVGSYR+DTEEE  TARF  VCFDCP W++ +G  I  G V P C  PLEH+SAD  G TLETLSID+GYWRATNES  ILAC+NADAC+GG+TG+ESFCASGY GPYC VCEP ++ SL AH C TRCS SR QGL+AA  +A + A  AIA        + +  +G   W    V  A+P +           +  HR +    + V   G Y      P  +   R + L P   A    +       P   + +  A+             GC W   D             +++   A   RI  H  SSRA+    +             LTFLVYSSVSSTVFQTFACETLDDG EY+RADYRI+C DA H+AFEV+AG M+ VYPVGIPLLY VLLF+RR VLADAG D K  A+ +SGLWEPYR ERFYYEVVEC RRVMLTG VVF FPNDAAQIAIT+L A  F  +FE +SPYKS+SD+WLSRGGHV VF SMFDLLL KVD S ER++SQA+FAGVLVAGHVLM++AIV EVVGICY S  +RV +  AV  + P     +   D V  FE  PASW S F  Q  V E+PGP R V+G V
Sbjct:  337 AGATFINNRANFGGALYLSTCENAFNFAQFVFENNSA-LDGGAVAVYQSGSETFGLPVVFFECTFLDNVASG---------------NGGAVETL--AGQQQFISCDFEGNSA--DVGGAMRLGGSAVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDLTCAVGSYRNDTEEEGATARFGTVCFDCPPWDDSAGNDITRGTVTPECAAPLEHSSADAVGATLETLSIDKGYWRATNESDRILACYNADACSGGQTGSESFCASGYMGPYCAVCEPRHSSSL-AHNC-TRCSGSRRQGLLAATVIAAIAAVLAIAAVSRYLLSTEHDEEGNAEWFHRRVVRAVPFQALKIIVVVWQILTQHRPKQKALEIVS--GTYSSQ---PNQTYIFRATSLIPAQFADAANVSY-----PGVYQDFLSAIDVINFDLGSLLAAGCVWSEIDFHHRLLVSTLGPLIVVAFLAMTYRIAMHRSSSRADHHSAAEKIRHKHQAALLLLTFLVYSSVSSTVFQTFACETLDDGVEYLRADYRINCKDAAHEAFEVFAGFMIFVYPVGIPLLYAVLLFQRRDVLADAGDDDKATAKSISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITLLSAFCFFAIFEMVSPYKSDSDMWLSRGGHVIVFFSMFDLLLRKVDVSDEREESQAVFAGVLVAGHVLMVLAIVVEVVGICYGSRGERVAKGTAVLSERPR----AGSDDGVTGFESVPASWTSSFRRQGSVSEKPGPNRIVAGEV 1081          
BLAST of mRNA_E-fasciculatus_F_contig159.4042.1 vs. uniprot
Match: A0A6H5JWT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT9_9PHAE)

HSP 1 Score: 494 bits (1273), Expect = 4.540e-151
Identity = 321/753 (42.63%), Postives = 428/753 (56.84%), Query Frame = 2
Query: 1469 TFINNSAT-NAGALFLSNSDYGFNFTDLSFQNNRASYAGGVVAAYEIGR-----IWPLTFSRCAFLGNVRGKPFEGYPFFQRPYFFVDGGCTTT--TEYVFESYYLSVYRPARIVLPDVGGALKLGGSADIIECSFLSNVAYTRGLAVAVVDSASSNDSSFVGNQLSCAVGSYRSDTEEEE-TTARFEMVCFDCPDWEECSGCSIESGDVAPTCVVPLEHTSADKGGVTLETLSIDEGYWRATNESAIILACFNADACTGGETGAESFCASGYQGPYCNVCEPGYAPSLVAHTCCTRCSSSRHQGLMAAAAVAVVVAAFAIATFFSIYGVDGAWRWVCGALPSKGTSSRSCPSIENHRRRVADFDPVR*RGQYYLSRRLPRLSERHRRS--QLRPPFLARGRVL------VVRLGLSPPTSRQYH-----GAVGCRWIVGDVILD-CDAKKQRIRRHCSSRANPPQTSNGSPT----LTFLVYSSVSSTVFQTFACETLDDGNEYIRADYRIHCTDAKHKAFEVYAGIMLAVYPVGIPLLYTVLLFRRRHVLADAGADKTVAQLVSGLWEPYRSERFYYEVVECARRVMLTGAVVFFFPNDAAQIAITMLMAVSFLVMFETLSPYKSESDIWLSRGGHVPVFLSMFDLLLLKVDESGERDQSQAIFAGVLVAGHVLMIIAIVAEVVGICYASGKKRVVR------------AAVSPQSPP*LSPSAE*DEVPAFEDSPASWRSFMAQKLVLEE 3610
            TF NNSA  N G +F S +  G  F  ++FQ N A+  GG VA Y  G        P +F  C F+ N   +                GG  +    E    S++   Y        DVGGAL+LGG  ++  C+F++N A +RGLA+A V   + +D+ F GN   C  G +  + E+EE  + R++ VCFDCP+  EC  CS++     PTC V L++T +++ GV+LETLS+  GYWRA+N S IILAC+N +AC GG+TG ++ C +GYQGPYC VCE GYA SL AHTC T+CSSSR  G + AAA+AVV                      C  L S   S +SC     HRR  A       +    + + L + +     S   +   F+    V+      +V  G     +  +H       +G   +VG +      A+++       S+A      +   +    +TFLVYSSVS+TVFQ FAC+ LDDG+ Y+RADYRI CT AKH+A +VYA  M+A+YPVGIPLLY  LL  RR VL D  ADK  AQ  + LWEPYR ERFYYEV+EC RRV+LTG VVF +PN AAQ+A+T+L+A  FL+++E L+PY+S+SD+WLSRGGHV VFLSMFD+LLLKVD S ER +SQ +FAGV+VAGH LM +A++ E VG+CYAS K + V             AA   +S   L  +AE +E    E    SW+SF+     LEE
Sbjct:  485 TFTNNSAFGNGGGVFSSANTAGQYFEGVTFQYNSAA-VGGAVATYGTGNGDEVTPVPASFVGCRFMSNAATE--------------TGGGVESAFGQENFVSSHFQDNYA-------DVGGALQLGGKTNVDGCAFVANSASSRGLAIAAVGFVNISDTLFEGNTFFCQAGEFVENKEQEEGDSGRYDTVCFDCPERSECYSCSVQEAAGRPTCSVALDNTVSEEAGVSLETLSMSRGYWRASNSSLIILACYNPEACLGGQTGVDNSCDNGYQGPYCAVCESGYASSL-AHTC-TQCSSSRRNGFVVAAAIAVVX-------------XXXXXXXXCAHLISGEVSEQSCL----HRRLSAMLPLQSFKIIIVVWQILTQFASAANISFPDVYQDFINALDVVNFDLGSLVASGCWADINVDFHDRLLVSTLGPLLVVGGLASTYAVAQRRNSSASGGSQAGVEAIRHKHLSAFLLVTFLVYSSVSATVFQMFACDKLDDGHTYLRADYRILCTSAKHEALQVYAAFMIALYPVGIPLLYAYLLHHRRDVLMDPTADKASAQSTADLWEPYRPERFYYEVIECGRRVLLTGVVVFIYPNTAAQVAVTILIAFFFLMVYEMLAPYRSDSDMWLSRGGHVIVFLSMFDVLLLKVDVSDERTESQRVFAGVIVAGHCLMFLAVIVEAVGVCYASSKGQPVSEHSVPSRRTFGPAAQRSRSTRALE-TAEDEECLPAEAPLGSWKSFVGLDAALEE 1195          
BLAST of mRNA_E-fasciculatus_F_contig159.4042.1 vs. uniprot
Match: A0A6H5L4F7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4F7_9PHAE)

HSP 1 Score: 482 bits (1240), Expect = 1.470e-148
Identity = 331/743 (44.55%), Postives = 406/743 (54.64%), Query Frame = 2
Query: 1529 GFNFTDLSFQNNRASYAGGVVAAYEIGRIW-PLTFSRCAFLGNVRGKPFEGYPFFQRPYFFVDGGCTTTTEYVFESYYLSVYRPARIVLPDVGGALKLGGSADIIECSFLSNVAYTRGLAVAVVDSASSNDSSFVGNQLSCAVGSYRSDTEEEETTARFEMVCFDCPDWEECSGCSIESGDVAPTCVVPLEHTSADKGGVTLETLSIDEGYWRATNESAII--------LACFNADACTGGETGAESF------CASGYQGPY----CNVCEPGYAPSLVAHTCCTRCSSSRHQGLMAAAAVAVVVAAFAIATFFSIYGVDGAWRWVCGALPSKGTSSRSCPSIENHRRRVADFDPVR*RGQYYLSRRLPRLSERHRRSQLRPPFLAR---GRVLVVRLGLSPP-------TSRQYHGA-----VGCRWIVGDVILDCDAKKQRIRRHCSSRANPPQTSNGSPT----LTFLVYSSVSSTVFQTFACETLDDGNEYIRADYRIHCTDAKHKAFEVYAGIMLAVYPVGIPLLYTVLLFRRRHVLADAGADKTVAQLVSGLWEPYRSERFYYEVVECARRVMLTGAVVFFFPNDAAQIAITMLMAVSFLVMFETLSPYKSESDIWLSRGGHVPVFLSMFDLLLLKVDESGERDQSQAIFAGVLVAGHVLMIIAIVAEVVGICYASGKKRVVRAAVSPQSPP*LSPSAE*DEVPAFEDSPASWRSFMAQKLVLEEPGPPRTVSGTV 3643
            G +FT  +FQ+N A   GG VAAY+ G  W  +TFSRC F  +V                                                GGA+ +     ++    L +    RGLA+AVV SA+ + SSF  N+L CA G YR D E++E+ ARFE VC +  DW EC GC IE  D  P C  PLEHTSAD  GVT ETL +D G+WRAT    +         L C       G      SF      C S    P     C VCE  Y+PSL AHTC TRCSSSR QGL+AA A+A +VA FA+ATFF                    T      +I   RRRV    PV+      +  ++  L++    + +  P + +   G + +V   L          +    HG      +G   +VG + +      +R R    + A   +  +   T    +TFL+YSSVSS VF TFACETLDD  EY+RAD RIH TDAKHKAFEVYAGIM+ VYPV IPLLY  LLF+ R VL   GADKT+AQ ++GLWE Y  ERFYYE   C RR++LTG VVF FPN A+QIAITML+A  F  +F+ LSPY S SD WLSRGGHV VFLSMFD LLLKVD SG+RDQSQA FAGVLVAGHVLMI+AIV EV  +CYAS +KRV     + + P   S     D+VPA E +PA WRSF+  + V E+ G  R+VSGTV
Sbjct:  312 GLSFTSTTFQSNSAGN-GGAVAAYDAGSDWIAMTFSRCTFSHDVASG--------------------------------------------TGGAVGV-----LLGYQELDS---WRGLAIAVVASATISGSSFSKNELYCAAGFYRHDAEKQESNARFEKVCLE-RDWNECDGCFIERSDDTPVCEAPLEHTSADTDGVTFETLKVDGGFWRATQYGCLYRGANGLGKLLCLRIHGTIGHTLATVSFLPSCSLCRSVVFVPVPLTDCAVCETDYSPSL-AHTC-TRCSSSRRQGLVAATAIAALVAVFAVATFFKFL---------------LSTEVEEGGNIGRFRRRVLRAVPVQALKIVVVVWQI--LTQFADVANVTYPSVYQDFLGAIDLVNFDLGSVLVAGCLWSDIDVHGRLLVSNIGPLIVVGFLTMTDRVAVRRNRSASGASAALEKIRHKHQTALLLVTFLLYSSVSSMVFSTFACETLDDDIEYLRADDRIHYTDAKHKAFEVYAGIMVFVYPVDIPLLYAALLFQHRDVLTRVGADKTLAQPIAGLWEAYSPERFYYE---CGRRILLTGGVVFIFPNTASQIAITMLIAFFFFAVFDVLSPYTSASDTWLSRGGHVIVFLSMFDFLLLKVDVSGDRDQSQAAFAGVLVAGHVLMILAIVVEVAALCYASRRKRVAEGEEASERPRVGS-----DDVPALESAPAPWRSFLRLRSVSEKTGSTRSVSGTV 973          
BLAST of mRNA_E-fasciculatus_F_contig159.4042.1 vs. uniprot
Match: D7G1E0_ECTSI (EsV-1-12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E0_ECTSI)

HSP 1 Score: 469 bits (1208), Expect = 2.950e-140
Identity = 284/503 (56.46%), Postives = 330/503 (65.61%), Query Frame = 2
Query: 2192 ACFNADACTGGETGAESFCASGYQGPYCNVCEPGYAPSLVAHTCCTRCSSSRHQGLMAAAAVAVVVAAFAIATFFSIY-------GVDGAWR-WVCGALPSKGTSSRSCPSIENHRRRVADFDPVR*RGQYYLSRRLPRLSERHRRSQLRPPFLARGRVLVVRLGLSPP-----TSRQYHGAVGCRWIVGDVILDCDAKKQRI--RRHCSS--RANPPQTSNGSPT----LTFLVYSSVSSTVFQTFACETLDDGNEYIRADYRIHCTDAKHKAFEVYAGIMLAVYPVGIPLLYTVLLFRRRHVLADAGADKTVAQLVSGLWEPYRSERFYYEVVECARRVMLTGAVVFFFPNDAAQIAITMLMAVSFLVMFETLSPYKSESDIWLSRGGHVPVFLSMFDLLLLKVDESGERDQSQAIFAGVLVAGHVLMIIAIVAEVVGICYASGKKRVVRAAVSPQSPP*LSPSAE*DEVPAFEDSPASWRSFMAQKLVLEEPGPPRTVSG 3637
            AC       GG+TGA++FCASGYQGPYC VC+  Y+PSL AHTC T CSSSR +GL   AA+AV+V  FAI   F          G+ G +R  V GA+P +  S +    +     + AD   V   G Y                     FL+   V+   +G         +   +H  +    I   V++   A    I  RRH +S       +  +   T    LTFLVYSSVSSTVFQTFACE LDD  EY+RADYRIHCTDAKH+AF+VYA IM+ VYPVGIPLLY  LLF+RRHVLADAGADKTVA  +SGLWEPYR ERFYYEVVEC RRVMLTG VVF FPNDAAQIAITML+ + F  +FE LSPY+SESD+WLSRGGHV VFLSMFDLLLLKVD S E DQSQA+F+GVLVAGHVLMI+ I+ EVVG+CYASGKKRVV AA SP+S P L P A  D+VPAFE  PASW SFM Q  V EEPGP R ++G
Sbjct:  875 ACHFKGNSAGGKTGADNFCASGYQGPYCAVCKTDYSPSL-AHTC-THCSSSRRRGLTVIAAIAVIVTVFAIVAIFQYMLSTEHEDGILGCFRRMVLGAVPVE--SLKIIVVVWQILTQFADAANVTYPGVYQ-------------------DFLSAIDVINFDIGSVLAAGCLWSDMDFHDRLLVTTIGPLVVVGFLAMTYGIVLRRHSASGDTGGVEKIYHKHQTALLLLTFLVYSSVSSTVFQTFACEILDDDVEYLRADYRIHCTDAKHQAFKVYAAIMIVVYPVGIPLLYAALLFQRRHVLADAGADKTVALSISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLLTLFFSSLFEILSPYESESDMWLSRGGHVIVFLSMFDLLLLKVDVSCESDQSQAVFSGVLVAGHVLMILVIIVEVVGMCYASGKKRVVGAASSPESSPGLRPRAGSDDVPAFESVPASWPSFMRQSSVSEEPGPTRRIAG 1354          
BLAST of mRNA_E-fasciculatus_F_contig159.4042.1 vs. uniprot
Match: A0A6H5JL43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL43_9PHAE)

HSP 1 Score: 396 bits (1017), Expect = 1.060e-118
Identity = 258/512 (50.39%), Postives = 293/512 (57.23%), Query Frame = 2
Query: 1982 EETTARFEMVCFDCPDWEECSGCSIESGDVAPTCVVPLEHTSA-DKGGVTLETLSIDEGYWRATNESAIILACFNADACTGGETGAESFCASGYQGPYCNVCEPGYAPSLVAHTCCTRCSSSRHQGLMAAAAVAVVVAAFAIATFFSIYGV-DGAWRWVCGALPSKGTSSRSCPSIENHRRRVADFDPVR*RGQYYLSRRLPRLSERHRRSQLRPPFLARGRVLVVRLGLSPPTSRQYHGAVGCRWIVGDVILDCDAKKQRIRRHCSSRANPPQTSNGSPTLTFLVYSSVSSTVFQTFACETLDDGNEYIRADYRIHCTDAKHKAFEVYAGIMLAVYPVGIPLLYTVLLFRRRHVLADAGADKTVAQLVSGLWEPYRSERFYYEVVECARRVMLTGAVVFFFPNDAAQIAITMLMAVSFLVMFETLSPYKSESDIWLSRGGHVPVFLSMFDLLLLKVDESGERDQSQAIFAGVLVAGHVLMIIAIVAEVVGICYASGKKRVVRAAVSPQSPP 3511
            EE+ ARFEMVCF  PDWEECSGCSIESGDVAPTC+VPLEHTS   K      T++     WRA+ +              G + G  +F                                +R   L       ++   + I  F  I GV  G W  +                       V +FD     G +  +  L    + H             R+LV  +G   P S         R      +L                            LTFLVYSSVSSTVFQTFACETLDDGNEY+RAD+RIHCTDAKHKAFEVYAG+MLAVYPVGIPLLY +LLFRRRHVL DA  DKTV Q +SGL EPYRSE FYYEVVEC RRVMLTG V+F FP+DAA  AITML+A SFL++FE LSPY+SESDIWLSRGGHV VFLS FDLLLLKVD SGE DQSQ +FAGVLVAGH+L I+AI AEVVGI YASGKKRVVRA VSP+  P
Sbjct:  369 EESNARFEMVCFGGPDWEECSGCSIESGDVAPTCMVPLEHTSVLMKASGARSTIAPSS--WRASMQMPA----------QGEKRGRTAFVPQ----------------------------DTRDHALK------IIFVVWQI--FTQIIGVYQGFWSVID----------------------VVNFDL----GSFLAAGCLWSDLDFH------------DRLLVNTMG---PASEATALVAQIRHKYQTALL---------------------------LLTFLVYSSVSSTVFQTFACETLDDGNEYLRADFRIHCTDAKHKAFEVYAGVMLAVYPVGIPLLYAILLFRRRHVLVDAVTDKTVPQSISGLREPYRSEWFYYEVVECGRRVMLTGVVIFVFPDDAAHFAITMLIAFSFLIVFEILSPYESESDIWLSRGGHVIVFLSTFDLLLLKVDVSGESDQSQTMFAGVLVAGHMLPILAIFAEVVGIWYASGKKRVVRAGVSPEISP 764          
BLAST of mRNA_E-fasciculatus_F_contig159.4042.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 375 bits (962), Expect = 1.150e-104
Identity = 274/703 (38.98%), Postives = 369/703 (52.49%), Query Frame = 2
Query: 1445 STLY-FSAATFINNSATNAGALFLSNSDYGFNFTDLSFQNNRASYAGGVVAAYEIG--------RIWPLTFSRCAFLGNVRGKPFEGYPFFQRPYFFVDGGCTTTTEYVFESYYLSVYRPARIVLPDVGGALKLGGSADIIECSFLSNVAYTRGLAVA---VVDSASSNDSSFVGNQLSCAVGSYRSDTEEEETTARFEMVCFDCP----DWEECSGCSIESGDVAPTCVVPLEHTSADKGGVTLETLSIDEGYWRATNESAIILACFNADACTGGETGAESFCASGYQGPYCNVCEPGYAPSLVAHTCCTRCSSSRHQGLMAAAAVAVVVAAFAIATFFSIYG--VDGAWRWVCGALPSKGTSSRSCPSIENHRRRVADFDPVR*RGQYYLSRRLPRLSERHRRSQLRPPFLARGRVLVVRLGLSPPTSR----QYHGAVGCRWIVGDVILDCDAKKQRI--RRHCSSRANPPQTSNGSPTL----TFLVYSSVSSTVFQTFACETLDDGNEYIRADYRIHCTDAKHKAFEVYAGIMLAVYPVGIPLLYTVLLFRRRHVLA--DAGADKTVAQL--VSGLWEPYRSERFYYEVVECARRVMLTGAVVFFFPNDAAQIAITMLMAVSFLVMFETLSPYKSESDIWLSRGGHVPVFLSMFDLLLLKVDESGERDQSQAIFAGVLVAGHVLMIIAIVAEVVGICY 3457
            ST++  S++ F +N+A   GA+ LS    G  F  ++F  NRA   GG V +   G         ++P+ +  C F  N                  V GG   T       Y  ++          VGGAL+LGGSA +  C+F+ N A   G AV+   V+D      S F GN LSC  G Y    + +    R++ VC  CP    DW      S+E+GD  P CVV L+HT ++ G  T+ETL +  GYWRATN+SA +LAC+N DAC GG T   +FC  GY+GPYC+VC  GY+ SL A TC T C    H G+     V V V   AIA    +    ++GA R V   +  K    +S   +    + +  F  V        +   P + +R         FL    +L   +   P         +HG +    I   V L   A    +  RR   S A   +  +   ++    TFLVYSSVS+TVFQ+FACE LDD  +Y+RADYRI C  ++H+AF+V+AGIM+ VYPVGIPL Y  LL++ R VL   DAG  +T  Q+  +S LW PY+  RFYYEV+EC RR+ LTG VVF +PN AAQ+A+T+++A SF+V    L+PY S+ D  +S  GHV VF SM+  LL KVD S ER  SQ +FAGVLVA H  M++A+V E + I Y
Sbjct: 1102 STVFNISSSIFESNTAGAGGAVMLSGVVIGPEFIQINFTANRAP-RGGAVYSVSSGIETNGGGDPLFPVGYKDCLFRDNEAS---------------VTGGAIETAA----GYDFAINSVFEANAAGVGGALRLGGSAILTNCTFIDNTAEDEGPAVSNLGVLDL--EGTSRFSGNVLSCENGMYLDSVDGD----RYQTVCDGCPVNNSDWI----VSVENGDRVPICVVQLDHTRSEGGDTTIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYEGPYCSVCSEGYSMSL-AFTC-TECVDD-HGGIAIMVVVGVFVLGAAIALCMHLVSGEMEGARRGVIHRVV-KRLPLQSIKIVVVVWQILTQFSSV-------ANVTYPDVYQR---------FLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVIFY 1754          
BLAST of mRNA_E-fasciculatus_F_contig159.4042.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 344 bits (882), Expect = 4.500e-97
Identity = 255/703 (36.27%), Postives = 349/703 (49.64%), Query Frame = 2
Query: 1469 TFINNSATNAG-ALFLSNSDYGFNFTDLSFQNNRASYAGGV-------VAAYEIGRIWPLTFSRCAFLGNVRGKPFEGYPFFQRPYFFVDGGCTTTT--EYVFESYYLSVYRPARIVLPDVGGALKLGGSADIIECSFLSNVAYT-RGLAVAVVDSASS-NDSSFVGNQLSCAVGSYRSDTEEEETTARFEMVCFDCPDWEECSGCSIESGDVAPTCVVPLEHTSADKGGVTLETLSIDEGYWRATNESAIILACFNADACTGGETGAESFCASGYQGPYCNVCEPGYAPSLVAHTCCTRCSSSRHQGLMAAAAVAVVVAAFAIATFFSIYGVDG--AWRW-------------------------VCGALPSKGTSSRSCPSIENHRRRVADFDPVR*RGQYYLSRRLPRLSERHRRSQLRP--PFLARGRVLVVRLGLSPPTSRQYHGAVGCRWIVGDVILDCDAKKQRIRRHCSSRANPPQTSNGSPTLTFLVYSSVSSTVFQTFACETLDDGNEYIRADYRIHCTDAKHKAFEVYAGIMLAVYPVGIPLLYTVLLFRRRHVLA---DAGADKTVAQLVSGLWEPYRSERFYYEVVECARRVMLTGAVVFFFPNDAAQIAITMLMAVSFLVMFETLSPYKSESDIWLSRGGHVPVFLSMFDLLLLKVDESGERDQSQAIFAGVLVAGHVLMIIAIVAEVV 3445
            +F++NSA  AG A+++S++  G  F+D+ F +N A   G V       V   E  ++ P TFSRC F  N                    GG   +   + +FE    +V+R  + V    GGAL+L G A ++ CSF+ N++    G AV+ V   S  ++++F GN  +CA  ++ + T  +      +  C  C     C GC      V P C   + H+ +D G VTLETLSID GYWRATN S  +LAC+N DAC GG TGA  +C  GY+GPYC +C   Y+  L     C++C + R  G++ A A+AV+         F++  V    AWR                          V   + ++ TS+ +    + ++R +   D       + LS       + H R  L    P +A    L+         SR   G      +V D             RH S              L FLVYS VSS VFQTFAC+ L+ G EY+RADYRI C  +KH+ F VYAG M+ +YPVGIP  Y  LL R R VL    D   D      +S LW+PYR   +YYEV+EC RR++LTG VVF +PN AAQIAIT++M V F V+ E L PY    D W+SR  H  VF+S++  LLLKVD S E+  SQ +F  VLVA H  MI+A+V E +
Sbjct:  355 SFVDNSANLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGNVKGGENDQLLPTTFSRCRFTFNRATAT---------------GGAVDSASGQDLFED---TVFRGNQAV---TGGALRLAGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTFLNYTSGDA----LDEACSGCQ--TTCDGCV--QPPVVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQL--GFTCSKCPN-RAGGILLATALAVI-------GLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMA----LLFLAATYRAGSRINRGNAATLQLVWD-------------RHVSMVL----------LLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETI 991          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig159.4042.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3S0_ECTSI8.010e-19357.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7J9_9PHAE1.890e-19051.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LAD4_9PHAE9.580e-18651.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KX12_9PHAE2.120e-18248.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWT9_9PHAE4.540e-15142.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4F7_9PHAE1.470e-14844.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1E0_ECTSI2.950e-14056.46EsV-1-12 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A6H5JL43_9PHAE1.060e-11850.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY65_9PHAE1.150e-10438.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHH1_ECTSI4.500e-9736.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig159contigE-fasciculatus_F_contig159:2805..7073 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score158.3
Seed ortholog evalue1e-35
Seed eggNOG ortholog2880.D7FTI5
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size3643
Cds size1620
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig159.4042.1prot_E-fasciculatus_F_contig159.4042.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig159 3733..5978 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928056.204793-UTR-E-fasciculatus_F_contig159:2804..37321622928056.204793-UTR-E-fasciculatus_F_contig159:2804..3732Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig159 2805..3732 +
1695995806.0149446-UTR-E-fasciculatus_F_contig159:2804..37321695995806.0149446-UTR-E-fasciculatus_F_contig159:2804..3732Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig159 2805..3732 +
1622928056.3535602-UTR-E-fasciculatus_F_contig159:5978..70731622928056.3535602-UTR-E-fasciculatus_F_contig159:5978..7073Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig159 5979..7073 +
1695995806.065107-UTR-E-fasciculatus_F_contig159:5978..70731695995806.065107-UTR-E-fasciculatus_F_contig159:5978..7073Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig159 5979..7073 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928056.2241845-CDS-E-fasciculatus_F_contig159:3732..47851622928056.2241845-CDS-E-fasciculatus_F_contig159:3732..4785Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig159 3733..4785 +
1695995806.0253143-CDS-E-fasciculatus_F_contig159:3732..47851695995806.0253143-CDS-E-fasciculatus_F_contig159:3732..4785Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig159 3733..4785 +
1622928056.2359586-CDS-E-fasciculatus_F_contig159:5027..53161622928056.2359586-CDS-E-fasciculatus_F_contig159:5027..5316Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig159 5028..5316 +
1695995806.0350673-CDS-E-fasciculatus_F_contig159:5027..53161695995806.0350673-CDS-E-fasciculatus_F_contig159:5027..5316Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig159 5028..5316 +
1622928056.250791-CDS-E-fasciculatus_F_contig159:5459..57291622928056.250791-CDS-E-fasciculatus_F_contig159:5459..5729Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig159 5460..5729 +
1695995806.0461538-CDS-E-fasciculatus_F_contig159:5459..57291695995806.0461538-CDS-E-fasciculatus_F_contig159:5459..5729Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig159 5460..5729 +
1622928056.2673495-CDS-E-fasciculatus_F_contig159:5970..59781622928056.2673495-CDS-E-fasciculatus_F_contig159:5970..5978Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig159 5971..5978 +
1695995806.0567589-CDS-E-fasciculatus_F_contig159:5970..59781695995806.0567589-CDS-E-fasciculatus_F_contig159:5970..5978Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig159 5971..5978 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig159.4042.1

>prot_E-fasciculatus_F_contig159.4042.1 ID=prot_E-fasciculatus_F_contig159.4042.1|Name=mRNA_E-fasciculatus_F_contig159.4042.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=540bp
MSSSSDYGRGYGGAILASANSTVSWNGDGTQFSSNSAGFGGAIHVDANST
VSWNGDGIQFKNNSAGEDGGAISADGSAVSWDGNGTQFSSNYAGNDGGAI
RAYPDSIVSWDGLGTQFSSNYASGDGGAILAWDSIVSWDRNTTFSSNVAG
GNGGGIACIDLGQREYVLESEVSTLYFSAATFINNSATNAGALFLSNSDY
GFNFTDLSFQNNRASYAGGVVAAYEIGRIWPLTFSRCAFLGNVRGKPFEG
YPFFQRPYFFVDGGCTTTTEYVFESYYLSVYRPARIVLPDVGGALKLGGS
ADIIECSFLSNVAYTRGLAVAVVDSASSNDSSFVGNQLSCAVGSYRSDTE
EEETTARFEMVCFDCPDWEECSGCSIESGDVAPTCVVPLEHTSADKGGVT
LETLSIDEGYWRATNESAIILACFNADACTGGETGAESFCASGYQGPYCN
VCEPGYAPSLVAHTCCTRCSSSRHQGLMAAAAVAVVVAAFAIATFFSIYG
VDGAWRWVCGALPSKGTSSRSCPSIENHRRRVADFDPVR*
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mRNA from alignment at E-fasciculatus_F_contig159:2805..7073+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig159.4042.1 ID=mRNA_E-fasciculatus_F_contig159.4042.1|Name=mRNA_E-fasciculatus_F_contig159.4042.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4269bp|location=Sequence derived from alignment at E-fasciculatus_F_contig159:2805..7073+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGGCGTTTTGGGAGCCGTCGCTCGGAGCCAAGAACTTCCGAACTGCAG CGTCGGCACCATCCCAGTTACCGTCGGCAGCGGCTAGCTTGGCAATTTCC GTTCTATATTCGAATGGCGACTTCAGCGTGCGGTGGGTTGGCGAGGTTTT CGTCGCAGAAACAATTCGTGTCACCAATGGCACATCGCTCAACATCACTG GGGTTGGACCGGGCGCCATTGCGGATGTACGCAACTGTTCGTTGTAGATG GAGATTCGAACCTGCACCTCTCGGACATGCCTTTGAGCAACGGCAACGCT TCGTTTGGCGAGACTATCTTTGCGAATCAATCTAGTGTCTCGTTTTTCGG AAATTCGTCGTTCATCTCCAACTCCGCGTATTACGGGGGTGCAATTCTCG CGACTTATTCGACCCTGTCCTGGAATGGCGACGGAACCCTGTTCAGCAAC AACTCCGCTGGACAATATGGAGGTGCATTGACGCAACGTATTCGACAGTG TCATGGAATGGCGACGGCACCCTGTTCACCTCCAACTCCGCGGAATATGG AGGCGCAATCAACGCTTATGAATCGACCGTGTCTTGGGATGGTGATGGAA CCCAATTCAGCTCGAACTATGCTAACGGATTTGGAGGTGCAATCCTCGCA TCGCCTAGTTCAACAGTGTCCTGGGATGGCGACGGCACCCAGTTCAGCTC CAACTCCCCGGATTATGGGGGTGCAATTCGACCCTGTCCTGGGATGGCGA CGGAACCGAGTTCACCAACACCTCCACTGGACAATATGGAGGTGCAGTTG ACGCGAGGTATTCCGCAGTGTCATGGGATGGCGACGGCATCAAGTTCAGC TCTAACTCGGCTGATTTTGGAGGCGCAATCAACGCGTTTGAATCAACCGT GTCTTGGGATGGCGACGGAACCCAATTCATGTCCAGCTCCTCGGACTATG GAAGAGGTTATGGAGGGGCAATCCTCGCATCGGCTAATTCGACCGTGTCA TGGAATGGGGACGGCACTCAGTTCAGCTCCAACTCCGCTGGTTTTGGAGG TGCAATCCACGTAGACGCCAACTCGACCGTGTCATGGAATGGTGACGGAA TCCAGTTCAAGAACAACTCCGCTGGCGAAGATGGAGGCGCAATCAGTGCG GATGGTTCGGCCGTCTCCTGGGATGGCAACGGAACACAGTTTAGCTCCAA CTACGCTGGAAACGATGGAGGTGCAATCCGCGCATATCCTGATTCGATTG TCTCGTGGGATGGCCTCGGAACCCAGTTCAGCTCCAACTACGCTAGCGGC GATGGCGGTGCAATCCTAGCTTGGGATTCGATCGTCTCCTGGGATCGGAA CACGACCTTCAGCAGCAACGTTGCGGGCGGGAACGGCGGCGGGATAGCTT GCATTGACTTGGGACAGCGTGAATATGTTCTCGAGAGTGAAGTGTCCACA CTCTACTTTTCCGCCGCGACATTCATCAACAACAGTGCAACAAATGCGGG GGCGTTATTCTTGTCGAACTCAGACTATGGCTTCAACTTCACAGACCTTT CATTTCAAAACAACCGGGCGAGTTATGCCGGTGGGGTGGTCGCGGCGTAC GAGATCGGACGGATCTGGCCATTGACGTTTTCGAGGTGTGCTTTCTTGGG CAACGTGAGAGGCAAACCATTCGAAGGGTACCCCTTTTTTCAGAGACCAT ACTTTTTTGTAGATGGCGGGTGTACAACCACCACTGAATATGTCTTCGAA TCGTATTACCTGAGCGTATACCGACCCGCACGAATCGTTTTGCCAGATGT CGGTGGAGCTCTGAAACTCGGCGGTTCAGCGGATATCATCGAGTGTTCCT TCCTCTCCAACGTGGCTTACACCCGTGGACTCGCTGTCGCTGTGGTGGAT TCTGCGAGTTCTAACGACTCATCTTTCGTCGGGAACCAACTGTCCTGCGC TGTTGGCTCGTATCGAAGCGATACCGAGGAGGTAATACTCTGCTCGCCGT TGGCGCGCTGTATTGGTTTGGGTTGATGGCAACGCATGCCTATCTGCTCT CAAACCAACCTAGGGCCTCTACTGCTACGTATGTCCATACTATGAACATC AATAGCTTAGTGCTTTCGTTGCGAGTACCTGGAACCACCATTTTCAAACA CTCATGTTGCTCACAGCAAAACCGCTTCCCGGTATAATCAAATTGCTTCG ATTTTTCCCTCATGACGAAACAGGAAGAAACCACCGCACGCTTTGAGATG GTGTGCTTTGACTGCCCTGATTGGGAAGAGTGCTCCGGCTGCTCCATCGA AAGCGGTGATGTCGCGCCGACATGCGTGGTGCCATTAGAGCACACTTCGG CCGACAAAGGTGGCGTGACGTTGGAAACACTCAGCATTGATGAAGGCTAC TGGCGCGCGACCAACGAAAGCGCCATCATCCTGGCGTGCTTCAACGCAGA TGCCTGCACAGGGGGAGAAACGGGGGCGGAGAGCTTTTGTGCCTCAGGAT ACCAGGGACCATGTGAGCTGGGGGTGGGGGACGTTACAACACATGGGCTT GGTTCTGATGTTTCTCGGAAGGCGTGAGAGTCCTCGCTCGCACCTATTCG TTTCTGAGCCCGCATCCTTGGCATCGCGCTCGTGTGCCCATTTCTACCTT TGCAGATTGCAACGTGTGCGAACCCGGTTATGCTCCATCGCTTGTTGCTC ACACGTGCTGTACACGATGCTCGAGTTCAAGACACCAGGGACTCATGGCC GCCGCTGCTGTCGCCGTGGTTGTGGCAGCCTTTGCTATTGCGACATTTTT TTCAATATATGGTGTTGACGGAGCTTGGAGATGGGTGTGTGGCGCGCTGC CATCGAAGGGTACTTCGAGCCGTTCCTGCCCAAGCATTGAAAATCATCGT CGTCGTGTGGCAGATTTTGACCCAGGTACGCCCTCACTGAACATGCCAGG CTAATTTGTGTCGGGAACCACCCAGGGGAGAGCGCGGAAGCTCAGCATAG AACTCTAATATAACGGACGGGCACACAGTGCGCCAAATGTTAAAGACAGG GAAAAGCAAAGTAGCAGAGAGGCCTTGGAATTTTGCAGGGGCTGACCGCC ATGTCCTAACCCCCATCTGTCCATGTCCCAACCCCATCTGTATGGAAACG CTATCGTTCCGCGCAGTTCGCTGACGTGGCCAATACTACCTATCCCGGCG TTTACCAAGGCTTTCTGAGCGCCATCGACGTAGTCAACTTCGACCTCCGT TCCTTGCTCGCGGCCGGGTGCTTGTGGTCCGACTTGGACTTTCACCGCCG ACTTCTCGTCAATACCATGGGGCCGTTGGTTGTCGTTGGATTGTTGGCGA TGTTATACTGGATTGCGATGCGAAGAAACAGCGCATCCGGAGACACTGCT CTAGTCGAGCAAATCCGCCACAAACATCAAACGGCTCTCCTACTTTGACA TTCCTGGTGTATTCCTCGGTATCGTCAACGGTGTTCCAAACTTTCGCCTG TGAGACACTTGATGACGGAAATGAATACATCCGGGCAGATTACCGTATCC ATTGCACGGATGCCAAACACAAGGCCTTTGAAGTTTACGCAGGGATCATG CTTGCTGTGTACCCGGTGGGTATCCCCCTGCTATATACCGTCCTGTTGTT TCGACGTCGCCACGTTCTGGCCGACGCAGGTGCCGATAAGACAGTAGCTC AGTTGGTTTCCGGTCTTTGGGAGCCGTACAGGTCCGAGCGGTTCTACTAC GAGGTAGTCGAGTGCGCACGCCGTGTCATGCTGACGGGTGCAGTTGTATT TTTCTTTCCGAATGATGCAGCCCAGATCGCGATCACGATGCTCATGGCGG TCTCTTTCTTAGTCATGTTCGAAACATTGTCGCCGTACAAGTCTGAGTCC GACATATGGCTTTCGCGGGGGGGTCATGTTCCTGTATTCCTCAGCATGTT CGATTTGTTGCTGCTGAAGGTGGATGAGTCCGGCGAGAGGGACCAGAGCC AGGCCATATTTGCAGGAGTGTTGGTGGCAGGGCACGTGTTGATGATTATT GCCATCGTTGCCGAGGTGGTTGGCATCTGCTACGCTTCAGGGAAGAAGCG AGTTGTCAGAGCAGCGGTGTCACCCCAGAGTCCTCCGTGATTGAGTCCAA GCGCGGAATAGGACGAAGTTCCCGCGTTTGAGGACTCTCCCGCGTCATGG CGGTCGTTCATGGCGCAAAAATTAGTGTTGGAAGAGCCTGGACCGCCTCG AACCGTCTCTGGGACTGTA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig159:2805..7073+

>mRNA_E-fasciculatus_F_contig159.4042.1 ID=mRNA_E-fasciculatus_F_contig159.4042.1|Name=mRNA_E-fasciculatus_F_contig159.4042.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3240bp|location=Sequence derived from alignment at E-fasciculatus_F_contig159:2805..7073+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTCCAGCTCCTCGGACTATGGAAGAGGTTATGGAGGGGCAATCCTCGC
ATCGGCTAATTCGACCGTGTCATGGAATGGGGACGGCACTCAGTTCAGCT
CCAACTCCGCTGGTTTTGGAGGTGCAATCCACGTAGACGCCAACTCGACC
GTGTCATGGAATGGTGACGGAATCCAGTTCAAGAACAACTCCGCTGGCGA
AGATGGAGGCGCAATCAGTGCGGATGGTTCGGCCGTCTCCTGGGATGGCA
ACGGAACACAGTTTAGCTCCAACTACGCTGGAAACGATGGAGGTGCAATC
CGCGCATATCCTGATTCGATTGTCTCGTGGGATGGCCTCGGAACCCAGTT
CAGCTCCAACTACGCTAGCGGCGATGGCGGTGCAATCCTAGCTTGGGATT
CGATCGTCTCCTGGGATCGGAACACGACCTTCAGCAGCAACGTTGCGGGC
GGGAACGGCGGCGGGATAGCTTGCATTGACTTGGGACAGCGTGAATATGT
TCTCGAGAGTGAAGTGTCCACACTCTACTTTTCCGCCGCGACATTCATCA
ACAACAGTGCAACAAATGCGGGGGCGTTATTCTTGTCGAACTCAGACTAT
GGCTTCAACTTCACAGACCTTTCATTTCAAAACAACCGGGCGAGTTATGC
CGGTGGGGTGGTCGCGGCGTACGAGATCGGACGGATCTGGCCATTGACGT
TTTCGAGGTGTGCTTTCTTGGGCAACGTGAGAGGCAAACCATTCGAAGGG
TACCCCTTTTTTCAGAGACCATACTTTTTTGTAGATGGCGGGTGTACAAC
CACCACTGAATATGTCTTCGAATCGTATTACCTGAGCGTATACCGACCCG
CACGAATCGTTTTGCCAGATGTCGGTGGAGCTCTGAAACTCGGCGGTTCA
GCGGATATCATCGAGTGTTCCTTCCTCTCCAACGTGGCTTACACCCGTGG
ACTCGCTGTCGCTGTGGTGGATTCTGCGAGTTCTAACGACTCATCTTTCG
TCGGGAACCAACTGTCCTGCGCTGTTGGCTCGTATCGAAGCGATACCGAG
GAGATGTCCAGCTCCTCGGACTATGGAAGAGGTTATGGAGGGGCAATCCT
CGCATCGGCTAATTCGACCGTGTCATGGAATGGGGACGGCACTCAGTTCA
GCTCCAACTCCGCTGGTTTTGGAGGTGCAATCCACGTAGACGCCAACTCG
ACCGTGTCATGGAATGGTGACGGAATCCAGTTCAAGAACAACTCCGCTGG
CGAAGATGGAGGCGCAATCAGTGCGGATGGTTCGGCCGTCTCCTGGGATG
GCAACGGAACACAGTTTAGCTCCAACTACGCTGGAAACGATGGAGGTGCA
ATCCGCGCATATCCTGATTCGATTGTCTCGTGGGATGGCCTCGGAACCCA
GTTCAGCTCCAACTACGCTAGCGGCGATGGCGGTGCAATCCTAGCTTGGG
ATTCGATCGTCTCCTGGGATCGGAACACGACCTTCAGCAGCAACGTTGCG
GGCGGGAACGGCGGCGGGATAGCTTGCATTGACTTGGGACAGCGTGAATA
TGTTCTCGAGAGTGAAGTGTCCACACTCTACTTTTCCGCCGCGACATTCA
TCAACAACAGTGCAACAAATGCGGGGGCGTTATTCTTGTCGAACTCAGAC
TATGGCTTCAACTTCACAGACCTTTCATTTCAAAACAACCGGGCGAGTTA
TGCCGGTGGGGTGGTCGCGGCGTACGAGATCGGACGGATCTGGCCATTGA
CGTTTTCGAGGTGTGCTTTCTTGGGCAACGTGAGAGGCAAACCATTCGAA
GGGTACCCCTTTTTTCAGAGACCATACTTTTTTGTAGATGGCGGGTGTAC
AACCACCACTGAATATGTCTTCGAATCGTATTACCTGAGCGTATACCGAC
CCGCACGAATCGTTTTGCCAGATGTCGGTGGAGCTCTGAAACTCGGCGGT
TCAGCGGATATCATCGAGTGTTCCTTCCTCTCCAACGTGGCTTACACCCG
TGGACTCGCTGTCGCTGTGGTGGATTCTGCGAGTTCTAACGACTCATCTT
TCGTCGGGAACCAACTGTCCTGCGCTGTTGGCTCGTATCGAAGCGATACC
GAGGAGGAAGAAACCACCGCACGCTTTGAGATGGTGTGCTTTGACTGCCC
TGATTGGGAAGAGTGCTCCGGCTGCTCCATCGAAAGCGGTGATGTCGCGC
CGACATGCGTGGTGCCATTAGAGCACACTTCGGCCGACAAAGGTGGCGTG
ACGTTGGAAACACTCAGCATTGATGAAGGCTACTGGCGCGCGACCAACGA
AAGCGCCATCATCCTGGCGTGCTTCAACGCAGATGCCTGCACAGGGGGAG
AAACGGGGGCGGAGAGCTTTTGTGCCTCAGGATACCAGGGACCATGAAGA
AACCACCGCACGCTTTGAGATGGTGTGCTTTGACTGCCCTGATTGGGAAG
AGTGCTCCGGCTGCTCCATCGAAAGCGGTGATGTCGCGCCGACATGCGTG
GTGCCATTAGAGCACACTTCGGCCGACAAAGGTGGCGTGACGTTGGAAAC
ACTCAGCATTGATGAAGGCTACTGGCGCGCGACCAACGAAAGCGCCATCA
TCCTGGCGTGCTTCAACGCAGATGCCTGCACAGGGGGAGAAACGGGGGCG
GAGAGCTTTTGTGCCTCAGGATACCAGGGACCATATTGCAACGTGTGCGA
ACCCGGTTATGCTCCATCGCTTGTTGCTCACACGTGCTGTACACGATGCT
CGAGTTCAAGACACCAGGGACTCATGGCCGCCGCTGCTGTCGCCGTGGTT
GTGGCAGCCTTTGCTATTGCGACATTTTTTTCAATATATGGTGTTGACGG
AGCTTGGAGATGGGTGTGTGGCGCGCTGCCATCGAAGGGTACTTCGAGCC
GTTCCTGCCCAAGCATTGAAAATCATCGTCGTCGTGTGGCAGATTTTGAC
CCAGATTGCAACGTGTGCGAACCCGGTTATGCTCCATCGCTTGTTGCTCA
CACGTGCTGTACACGATGCTCGAGTTCAAGACACCAGGGACTCATGGCCG
CCGCTGCTGTCGCCGTGGTTGTGGCAGCCTTTGCTATTGCGACATTTTTT
TCAATATATGGTGTTGACGGAGCTTGGAGATGGGTGTGTGGCGCGCTGCC
ATCGAAGGGTACTTCGAGCCGTTCCTGCCCAAGCATTGAAAATCATCGTC
GTCGTGTGGCAGATTTTGACCCAGTTCGCTGATTCGCTGA
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