prot_E-fasciculatus_F_contig15899.4041.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15899.4041.1
Unique Nameprot_E-fasciculatus_F_contig15899.4041.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length78
Homology
BLAST of mRNA_E-fasciculatus_F_contig15899.4041.1 vs. uniprot
Match: A0A6H5LAU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAU0_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 1.230e-45
Identity = 77/78 (98.72%), Postives = 77/78 (98.72%), Query Frame = 0
Query:    1 GWRARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEA 78
            GWRARLLGDTTFMTKLAIEMVTGT AQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEA
Sbjct:   37 GWRARLLGDTTFMTKLAIEMVTGTGAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEA 114          
BLAST of mRNA_E-fasciculatus_F_contig15899.4041.1 vs. uniprot
Match: D7FZL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL4_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 1.370e-44
Identity = 77/78 (98.72%), Postives = 78/78 (100.00%), Query Frame = 0
Query:    1 GWRARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEA 78
            GWRARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGK+FMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEA
Sbjct:  161 GWRARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKKFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEA 238          
BLAST of mRNA_E-fasciculatus_F_contig15899.4041.1 vs. uniprot
Match: A0A7S3XYV0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYV0_HETAK)

HSP 1 Score: 79.3 bits (194), Expect = 6.550e-16
Identity = 37/72 (51.39%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    1 GWRARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKA 72
            G+R RL+ D +F+TK A+E+  G   Q  AE ++RG + +Q+LDFV AD LTC+ ANF AVWL+ PT+A  A
Sbjct:   62 GFRNRLMNDPSFLTKCAMEIGIGGVCQLAAEVKERGDKLLQQLDFVVADVLTCVIANFMAVWLAAPTLAALA 133          
BLAST of mRNA_E-fasciculatus_F_contig15899.4041.1 vs. uniprot
Match: A0A7J7PTU3_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PTU3_9CHLO)

HSP 1 Score: 73.2 bits (178), Expect = 1.140e-13
Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 0
Query:    1 GWRARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKA 72
            G+R RLL D +F+TKLAIE+  G   +  AEY KRG+ F +ELDFVAA+ +  + A+F  VWL  PT++  A
Sbjct:   57 GFRERLLADPSFLTKLAIEVGIGVCTKCTAEYAKRGESFNKELDFVAANVVMAIIADFMLVWLPAPTLSYAA 128          
BLAST of mRNA_E-fasciculatus_F_contig15899.4041.1 vs. uniprot
Match: UPI00125CEE82 (protein RETICULATA-RELATED 4, chloroplastic-like n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125CEE82)

HSP 1 Score: 73.2 bits (178), Expect = 2.060e-13
Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = 0
Query:    1 GWRARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVK 71
            G+R RLLGD  F+ KL +E   G   +  AE QKRG++F +ELDFV AD +  L A+F  VWL  PTV+++
Sbjct:  162 GFRERLLGDDLFLAKLGMECGVGIFTKMAAELQKRGEKFSKELDFVCADVIMALVADFMLVWLPAPTVSLR 232          
BLAST of mRNA_E-fasciculatus_F_contig15899.4041.1 vs. uniprot
Match: A0A0K9NW10_ZOSMR (Uncharacterized protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NW10_ZOSMR)

HSP 1 Score: 72.0 bits (175), Expect = 5.140e-13
Identity = 35/72 (48.61%), Postives = 48/72 (66.67%), Query Frame = 0
Query:    1 GWRARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKA 72
            G++ RLL D  F+TK+AIE   G   +  AEY+KR + F +ELDFV AD +  + A+F  VWL  PTV++KA
Sbjct:  150 GFKERLLADDLFLTKVAIECGVGVFTKTAAEYKKRKENFFKELDFVIADVVMAIIADFMLVWLPAPTVSLKA 221          
BLAST of mRNA_E-fasciculatus_F_contig15899.4041.1 vs. uniprot
Match: A0A388L9G5_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L9G5_CHABU)

HSP 1 Score: 72.0 bits (175), Expect = 5.910e-13
Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = 0
Query:    1 GWRARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEA 78
            G+R RLL D  F++K+  E   G   +  AEY++R  RFM+ELDFV AD +  + A+F  VWL  PTVA++A   K A
Sbjct:  263 GFRERLLADDLFVSKVLFECGIGVCTKTAAEYERRRDRFMKELDFVFADVIMAIIADFMLVWLPAPTVAIRAPIAKGA 340          
BLAST of mRNA_E-fasciculatus_F_contig15899.4041.1 vs. uniprot
Match: A0A443PX79_9MAGN (Protein RETICULATA-RELATED 4, chloroplastic-like protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443PX79_9MAGN)

HSP 1 Score: 71.6 bits (174), Expect = 7.100e-13
Identity = 32/71 (45.07%), Postives = 49/71 (69.01%), Query Frame = 0
Query:    1 GWRARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVK 71
            G++ RLL D  F+ K+ +E+V G  A+  AEY +RG++F +ELDFV AD +  + A+F  VWL  PTV+++
Sbjct:  156 GFKERLLADELFLHKITMEIVVGMFAKTAAEYNRRGEKFFKELDFVIADVVMAIIADFMLVWLPAPTVSLR 226          
BLAST of mRNA_E-fasciculatus_F_contig15899.4041.1 vs. uniprot
Match: A0A2J7ZNX1_9CHLO (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZNX1_9CHLO)

HSP 1 Score: 71.2 bits (173), Expect = 8.090e-13
Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 0
Query:    1 GWRARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVK 71
            G+R RLLGD +F  KLAIE+  G   +  AEY KRG+ F +E DFV A+TL  + A+F   WL  PT++ K
Sbjct:  153 GFRERLLGDPSFPVKLAIEIGIGVVMKITAEYTKRGESFYREADFVFANTLMAIIADFMLTWLPAPTLSYK 223          
BLAST of mRNA_E-fasciculatus_F_contig15899.4041.1 vs. uniprot
Match: UPI001929E0AF (LOW QUALITY PROTEIN: protein RETICULATA-RELATED 4, chloroplastic-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929E0AF)

HSP 1 Score: 71.2 bits (173), Expect = 9.880e-13
Identity = 34/71 (47.89%), Postives = 47/71 (66.20%), Query Frame = 0
Query:    1 GWRARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVK 71
            G++ RLL D  F+ K+A+E   G   + LAEYQ+RG+ F +ELDFV AD L  + A+F  VWL  PTV ++
Sbjct:  161 GFKERLLADDLFLAKVAMECGVGIFTKTLAEYQRRGENFTKELDFVIADVLMAIVADFMLVWLPAPTVPLR 231          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15899.4041.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LAU0_9PHAE1.230e-4598.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZL4_ECTSI1.370e-4498.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3XYV0_HETAK6.550e-1651.39Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7J7PTU3_9CHLO1.140e-1350.00Uncharacterized protein n=1 Tax=Scenedesmus sp. NR... [more]
UPI00125CEE822.060e-1349.30protein RETICULATA-RELATED 4, chloroplastic-like n... [more]
A0A0K9NW10_ZOSMR5.140e-1348.61Uncharacterized protein n=1 Tax=Zostera marina Tax... [more]
A0A388L9G5_CHABU5.910e-1346.15Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A443PX79_9MAGN7.100e-1345.07Protein RETICULATA-RELATED 4, chloroplastic-like p... [more]
A0A2J7ZNX1_9CHLO8.090e-1349.30Uncharacterized protein n=1 Tax=Tetrabaena sociali... [more]
UPI001929E0AF9.880e-1347.89LOW QUALITY PROTEIN: protein RETICULATA-RELATED 4,... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021825Protein RETICULATA-relatedPFAMPF11891RETICULATA-likecoord: 5..75
e-value: 1.3E-19
score: 70.7
NoneNo IPR availablePANTHERPTHR31620:SF8coord: 1..73
NoneNo IPR availablePANTHERPTHR31620FAMILY NOT NAMEDcoord: 1..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..78
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15899contigE-fasciculatus_F_contig15899:2264..2497 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15899.4041.1mRNA_E-fasciculatus_F_contig15899.4041.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15899 2264..2497 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15899.4041.1 ID=prot_E-fasciculatus_F_contig15899.4041.1|Name=mRNA_E-fasciculatus_F_contig15899.4041.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=78bp
GWRARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKRFMQELDFVAADT
LTCLFANFAAVWLSCPTVAVKAVCKKEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021825RETICULATA-related