mRNA_E-fasciculatus_F_contig1588.4033.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1588.4033.1 vs. uniprot
Match: A0A6H5JSG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG4_9PHAE) HSP 1 Score: 169 bits (428), Expect = 4.940e-43 Identity = 119/308 (38.64%), Postives = 166/308 (53.90%), Query Frame = 3
Query: 135 DDITAENDQAVIDMWWFASDIASTETDYYDHIAIYMSEEE--PTESTLSFLFVPYTRVESGVSETIYKHTELTIGKTTKKDLSGDVTTTFPALVLSSSDFFTENTLTTTSDDGDDHVIGRLFLDMKQGSYSLTAVAEVNPLDIGTFLGNIGGFWELLLILWGLFFIATREEREPKMKARDFGKTVQTTKDIVTRRRSLSVDSAPSTTSGVEQRPEWEAAFRGNTAAVPQFGGGNTAVPTWPPVPPVNDGAASTATRRASNDSSRNGSTSSALFRRTTSGFSDPHGXXXXXXXXRPVVRDMPRRGSKTG 1052
D + + + +A I M W ASD A T T Y + +A+ S + P +SF++VPY R + +LTIGKTTKK L G TT FPAL +S++ + T +S + + +G L L ++QG +SLT+V EV+PLD+G+F GN+GGFWELLL+LWGL F ATR++R P+++AR+F +Q K+IV RRRSLSVDS S E+ P+ + F GN P PP P R N ST+ + + + S P RPVV D+PRRG + G
Sbjct: 49 DGVPSSDLRATISMNWLASDTADTATIYTEQVAVTASASDDLPEVEDISFVYVPYDRYTTADPIDELNTVDLTIGKTTKKMLDGSSTTVFPALTISTTTTVIQETSLPSSTYAE-YALGYLKLMVRQGPFSLTSVEEVSPLDVGSFFGNLGGFWELLLVLWGLLFFATRQDRTPQLRARNF---IQPLKEIVARRRSLSVDSGASIVQP-EELPQERSFFGGNHP------------PALPPRP------------RGGNTMPGGRSTAVGVSTMSPATLSSP------VSSQRPVVEDVPRRGWRIG 321
BLAST of mRNA_E-fasciculatus_F_contig1588.4033.1 vs. uniprot
Match: D7FTW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW4_ECTSI) HSP 1 Score: 117 bits (294), Expect = 1.760e-26 Identity = 62/83 (74.70%), Postives = 68/83 (81.93%), Query Frame = 3
Query: 345 TIGKTTKKDLSGDVTTTFPALVLSSSDFFTENTLTTTSDDG-DDHVIGRLFLDMKQGSYSLTAVAEVNPLDIGTFLGNIGGFW 590
TIGKTTKK L+GDVTTTFP LVLSSSDF ENT T+ DD D GRL+LD+KQG YS TA+AEV+PLDIGTFLGNIGGFW
Sbjct: 118 TIGKTTKKKLNGDVTTTFPPLVLSSSDFTAENTWATSEDDSFQDASFGRLYLDIKQGDYSRTAIAEVDPLDIGTFLGNIGGFW 200
BLAST of mRNA_E-fasciculatus_F_contig1588.4033.1 vs. uniprot
Match: A0A6H5JY22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY22_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 7.100e-17 Identity = 46/70 (65.71%), Postives = 53/70 (75.71%), Query Frame = 3
Query: 135 DDITAENDQAVIDMWWFASDIASTETDYYDHIAIYMSEEEPTESTLSFLFVPYTRVESGVSETIYKHTEL 344
DDIT END+ IDMWW SD+AS ETDY+DHI +YM+EEEPTEST SFL VPY+R+ V E IY EL
Sbjct: 121 DDITTENDEVTIDMWWIQSDMASDETDYFDHIGMYMAEEEPTESTSSFLHVPYSRILPDV-EVIYTVAEL 189
BLAST of mRNA_E-fasciculatus_F_contig1588.4033.1 vs. uniprot
Match: D7FTW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW9_ECTSI) HSP 1 Score: 70.1 bits (170), Expect = 2.720e-10 Identity = 48/140 (34.29%), Postives = 73/140 (52.14%), Query Frame = 3
Query: 507 QGSYSLTAVAEVNPLDIGTFLGNIGGFWELLLILWGLFFIATREEREPKMKARDFGKTVQTTKDI-----VTRRRSLSVDSAPSTTSGVEQRPEWEAAFRGNTAAVPQFGGGNTAVPTWPPVPPVNDGAASTATRRASND 911
QGSYS + +++PLDIG LGNIGGFW +L+ + +FF E+ P+++AR F T + T+++ T S S D++ T EQ P+W G G + V T P +P + + S RR+SN+
Sbjct: 8 QGSYSFITIEDIDPLDIGDLLGNIGGFWGYVLLSFAVFFTVAEPEKLPRLRARAFY-TKRGTEEMRRRLSATSSTSKSPDASQGATEVREQLPDWADERNGGEGEAE----GKSEVET-PAIPSLKNPTPSMIRRRSSNE 141
BLAST of mRNA_E-fasciculatus_F_contig1588.4033.1 vs. uniprot
Match: A0A6H5KZM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM8_9PHAE) HSP 1 Score: 73.6 bits (179), Expect = 2.750e-10 Identity = 42/104 (40.38%), Postives = 62/104 (59.62%), Query Frame = 3
Query: 483 GRLFLDMKQGSYSLTAVAEVNPLDIGTFLGNIGGFWELLLILWGLFFIATREEREPKMKARDFGKTVQTTKDIVTR-----RRSLSVDSAPSTTSGVEQRPEWE 779
G L + + QGSYSL + +++PLDIG LGNIGGFW +L+ + +FF E+ P+++AR F T + T +I+ R S S D++ T EQ P+WE
Sbjct: 169 GFLNIYVLQGSYSLIIIEDIDPLDIGDLLGNIGGFWGYVLLSFAVFFTVAEPEKLPRLRARAFY-TKRGTDEIIRRLSATSSTSKSPDASQGATEVREQPPDWE 271
BLAST of mRNA_E-fasciculatus_F_contig1588.4033.1 vs. uniprot
Match: D7FU22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU22_ECTSI) HSP 1 Score: 71.6 bits (174), Expect = 6.410e-10 Identity = 61/175 (34.86%), Postives = 90/175 (51.43%), Query Frame = 3
Query: 336 TELTIGKTTKKDLSGDVTTTFPALVLSSSDFFTENTLTTTSDDGDDHVIGRLFLDMKQGSYSLTAVAEVNPLDIGTFLGNIGGFWELLLILWGLFFIATREEREPKMKARDFGKTVQTTKDIV---TRR---------RSLSVDSAPSTTSGVEQRPE-WEAAFRGNTAAVPQFG 821
T + IG T + L D T ++ AL +SS+ + + T T G L +++ Q + SL + E+NPL+I GN+GGFW+LLL+LW +FFI+ + +P +K R+F K+V D V TRR R + D + T E+RP WE G T +P FG
Sbjct: 11 TYMGIGLTKEDKLYEDDTASYKALEISSALYKDKRTDNIT---GIASPYAWLSMEIAQSTDSLEEITEINPLEIAELFGNVGGFWDLLLLLWPIFFISASRQ-DPHLKGRNFKKSVTRGSDRVVDLTRRVNNATPYRVRRKAGDRKSNATDEDEERPPAWET---GGT--LPAFG 176
BLAST of mRNA_E-fasciculatus_F_contig1588.4033.1 vs. uniprot
Match: D7FU23_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU23_ECTSI) HSP 1 Score: 73.2 bits (178), Expect = 8.410e-10 Identity = 61/211 (28.91%), Postives = 105/211 (49.76%), Query Frame = 3
Query: 108 CASSMKKVADDITAENDQA---VIDMWWFASDIASTET-------DYYDHI-AIYMSEEEPTESTLSF-LFVPYTRVESGVSETIYKHTELTIGKTTKKDLSGDVTTTFPALVLSSSDFFTENTLTTTSDDGDDHVIGRLFLDMKQGSYSLTAVAEVNPLDIGTFLGNIGGFWELLLILWGLFFIATREEREPKMKARDFGKTVQTTKDIV 704
C S D + E D +++M+W+ A+ T ++ H +++M + LS + V Y+ + S S ++ T + IG T + L D T ++ AL SS+ + + T T G L +++ Q + SL + E+NPL+I GN+GGFW+LLL+LW +FFI+ + +P +K R+F K+V ++V
Sbjct: 118 CVSFETSAVDIVDGERDPEDYILLNMYWYPGGTANASTTCISEEGEWESHSESVFMFLRDSDTGILSAGIQVAYSCMTSESSSHVF--TYMGIGLTKEDKLYEDDTASYKALETSSAIYKDKRTDNIT---GIASPYAWLSMEIAQTTDSLEEITEINPLEIAELFGNVGGFWDLLLMLWPIFFISASRQ-DPHLKVRNFKKSVTRGSEVV 322
BLAST of mRNA_E-fasciculatus_F_contig1588.4033.1 vs. uniprot
Match: A0A6H5K474_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K474_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 8.510e-10 Identity = 66/235 (28.09%), Postives = 113/235 (48.09%), Query Frame = 3
Query: 156 DQAVIDMWWFASDIASTETD-----YYDHIA-IYMSEEEPTESTLSF-LFVPYTRVESGVSETIYKHTELTIGKTTKKDLSGDVTTTFPALVLSSSDFFTENTLTTTSDDGDDHVI---GRLFLDMKQGSYSLTAVAEVNPLDIGTFLGNIGGFWELLLILWGLFFIATREEREPKMKARDFGKTVQT------TKDIVTRRRSLSVDSAPSTTSGVEQRPEWEAAFRGNTAAVP 812
D ++DM+W+ + T + H +Y+ +P +S + VPY+ + + VS + + HT + IG TT+ L + AL +S++ T D+ + ++ +L L ++Q SL + EV+PLD+ GN+GGFW+LL+I+W +FF+A + +P +K R+F K+V D R + +P VE+RP WE + VP
Sbjct: 183 DYLLLDMYWYPGGLEVDSTTCVVEGWKTHKQWMYVFLNDPVLGQVSTGIQVPYSCI-TNVSSS-HSHTYVGIGVTTEDKLGQEPIVNNKALSVSTA---------TVKDEVNPAIVKPYAQLSLQVQQEPNSLEVITEVDPLDLAEMFGNVGGFWDLLMIMWPIFFVAASRQ-DPHLKPRNFKKSVNKGLGGLRVGDSTHRGARDDFNGSPP----VEERPYWEQEGKKEVVEVP 401
BLAST of mRNA_E-fasciculatus_F_contig1588.4033.1 vs. uniprot
Match: A0A6H5JF84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF84_9PHAE) HSP 1 Score: 67.0 bits (162), Expect = 1.070e-8 Identity = 40/112 (35.71%), Postives = 64/112 (57.14%), Query Frame = 3
Query: 348 IGKTTKKDLSGDVTTTFPALVLSSSDFFTENTLTTTSDDGD-DHVIGRLFLDMKQGSYSLTAVAEVNPLDIGTFLGNIGGFWELLLILWGLFFIATREEREPKMKARDFGKT 680
IG T + +GD+ +++ A+ ++S + + DGD RL +++KQ S + E +P + LGNIGGFW+L+LILW LFF+A + EP +K R+F K+
Sbjct: 49 IGLTNQIKYTGDIISSYKAVSINSGVYKDQA-------DGDITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQP-EPNLKPRNFAKS 152
BLAST of mRNA_E-fasciculatus_F_contig1588.4033.1 vs. uniprot
Match: D7FXH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH8_ECTSI) HSP 1 Score: 68.6 bits (166), Expect = 1.860e-8 Identity = 49/193 (25.39%), Postives = 95/193 (49.22%), Query Frame = 3
Query: 156 DQAVIDMWWFASDIASTETD-----------YYDHIAIYMSEEEPTESTLSFLFVPYTRVESGVSETIYKHTELTIGKTTKKDLSGDVTTTFPALVLSSSDFFTENTLTTTSDDGDDHVI---GRLFLDMKQGSYSLTAVAEVNPLDIGTFLGNIGGFWELLLILWGLFFIATREEREPKMKARDFGKTVQTT 692
D ++DM+W+ S +T++ + + + ++++ E + + + Y+ + S + ++ + IG T + + D +++ A+ ++S + D D + RL +++KQ S + E +P + LGNIGGFW+L+LILW LFF+A + EP +K R+F K+V T
Sbjct: 154 DYILLDMYWYPSGNETTDSTTCVEDGEEWEPHREWVYAFLTDPEDVTMVSTAVQLSYSCITSASTSHVFN--SVGIGLTNQIKYAADDVSSYKAVSINSGVY---------KDQADADITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQP-EPNLKPRNFAKSVTRT 334 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1588.4033.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1588.4033.1 >prot_E-fasciculatus_F_contig1588.4033.1 ID=prot_E-fasciculatus_F_contig1588.4033.1|Name=mRNA_E-fasciculatus_F_contig1588.4033.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=346bp MTSTLIHTWRCASSMKKVADDITAENDQAVIDMWWFASDIASTETDYYDHback to top mRNA from alignment at E-fasciculatus_F_contig1588:7596..14004- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1588.4033.1 ID=mRNA_E-fasciculatus_F_contig1588.4033.1|Name=mRNA_E-fasciculatus_F_contig1588.4033.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6409bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1588:7596..14004- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1588:7596..14004- >mRNA_E-fasciculatus_F_contig1588.4033.1 ID=mRNA_E-fasciculatus_F_contig1588.4033.1|Name=mRNA_E-fasciculatus_F_contig1588.4033.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2076bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1588:7596..14004- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |