prot_E-fasciculatus_F_contig15872.4030.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15872.4030.1
Unique Nameprot_E-fasciculatus_F_contig15872.4030.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length151
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15872.4030.1 vs. uniprot
Match: D7G6M1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M1_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 3.520e-80
Identity = 132/151 (87.42%), Postives = 136/151 (90.07%), Query Frame = 0 
Query:    1 KGDGGWDSAVAAAENTHLDLGGLNEGILSLAWLPGADSVLLAGTGFKSLKSIDVRGRGDDALRSADSSNIVVRTMEAHKGTVSGIAVLPEDPRIVATWSDTVGEPVKLWKSRSLLGRNAGGGNVKGRDASQSSNPVATLRPPDKTSFVVDV 151
            KGDGGWDSAVAAAEN H DLGG NEG  SLAWLPG DSVLLAGTG K LKSIDVRGRGDDALRSADSSN+V RTME HKG V  IAVLPEDPRIVATWSD+VGEPVKLWKSRSL+GRN GGGNVK RDASQSSNPVATLRPPDKTSFVVD+
Sbjct:  290 KGDGGWDSAVAAAENAHADLGG-NEGYASLAWLPGTDSVLLAGTGSKFLKSIDVRGRGDDALRSADSSNVVPRTMEVHKGGVIRIAVLPEDPRIVATWSDSVGEPVKLWKSRSLVGRNGGGGNVKARDASQSSNPVATLRPPDKTSFVVDI 439
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15872.4030.1 vs. uniprot
Match: A0A6H5KKS1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKS1_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 1.530e-73
Identity = 128/151 (84.77%), Postives = 132/151 (87.42%), Query Frame = 0 
Query:    1 KGDGGWDSAVAAAENTHLDLGGLNEGILSLAWLPGADSVLLAGTGFKSLKSIDVRGRGDDALRSADSSNIVVRTMEAHKGTVSGIAVLPEDPRIVATWSDTVGEPVKLWKSRSLLGRNAGGGNVKGRDASQSSNPVATLRPPDKTSFVVDV 151
            KGD GWDSAVAAAENTH DLGGLNEG +SLAWLPG DSVLLAGTG K LKSIDVRGRG      ADSSN V+R ME HKG V GIAVLPEDPRIVATWSD+ GEPVKLWKSRSL+GRNAGGGNVK RDASQSSNPVATLRPPDKTSFVVDV
Sbjct:  703 KGDCGWDSAVAAAENTHADLGGLNEGYVSLAWLPGTDSVLLAGTGSKFLKSIDVRGRG------ADSSNSVLRIMEVHKGGVVGIAVLPEDPRIVATWSDSAGEPVKLWKSRSLVGRNAGGGNVKARDASQSSNPVATLRPPDKTSFVVDV 847
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15872.4030.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6M1_ECTSI3.520e-8087.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKS1_9PHAE1.530e-7384.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 6..146
e-value: 3.4E-8
score: 35.3
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 26..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15872contigE-fasciculatus_F_contig15872:104..2149 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15872.4030.1mRNA_E-fasciculatus_F_contig15872.4030.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15872 104..2149 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15872.4030.1 ID=prot_E-fasciculatus_F_contig15872.4030.1|Name=mRNA_E-fasciculatus_F_contig15872.4030.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=151bp
KGDGGWDSAVAAAENTHLDLGGLNEGILSLAWLPGADSVLLAGTGFKSLK
SIDVRGRGDDALRSADSSNIVVRTMEAHKGTVSGIAVLPEDPRIVATWSD
TVGEPVKLWKSRSLLGRNAGGGNVKGRDASQSSNPVATLRPPDKTSFVVD
V
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR015943WD40/YVTN_repeat-like_dom_sf