mRNA_E-fasciculatus_F_contig15871.4029.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15871.4029.1 vs. uniprot
Match: A0A6H5L0I5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I5_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 1.480e-21 Identity = 47/103 (45.63%), Postives = 66/103 (64.08%), Query Frame = 1
Query: 1 VCRVDFLRPDSGDIWYLRLLLHHIAASNWTDLRLYNGELHGSHQAAARARGLVADTEEYDLTFREAIDFSTPRELRCLFVTLIIAGAPANTLWETHQDALVAD 309
V RV + PD GD++YLRLLLHH A ++ LR ++ ++ + Q AARA G++ +EY + +EA+ F+T R+LR LFVTLI+ GAPA LWE D
Sbjct: 286 VARVSAMSPDKGDVFYLRLLLHHKPARSFEQLRTHDDTVYDTFQDAARAMGIIKHDDEYRICLQEAVIFNTGRQLRELFVTLILDGAPAKILWEQFNQDFTED 388
BLAST of mRNA_E-fasciculatus_F_contig15871.4029.1 vs. uniprot
Match: A0A6H5JZJ6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ6_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 3.770e-21 Identity = 46/103 (44.66%), Postives = 66/103 (64.08%), Query Frame = 1
Query: 1 VCRVDFLRPDSGDIWYLRLLLHHIAASNWTDLRLYNGELHGSHQAAARARGLVADTEEYDLTFREAIDFSTPRELRCLFVTLIIAGAPANTLWETHQDALVAD 309
V RV + PD GD+++LRLLLHH A ++ LR ++ ++ + Q AARA G++ +EY + +EA+ F+T R+LR LFVTLI+ GAPA LWE D
Sbjct: 123 VARVSVMSPDKGDVFFLRLLLHHKPARSFEQLRTHDDTVYDTFQDAARAMGIIKHDDEYRICLQEAVIFNTGRQLRELFVTLILDGAPAKILWEQFNQDFTED 225
BLAST of mRNA_E-fasciculatus_F_contig15871.4029.1 vs. uniprot
Match: A0A8H3XFJ6_GIGMA (ATP-dependent DNA helicase PIF1 n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H3XFJ6_GIGMA) HSP 1 Score: 86.7 bits (213), Expect = 6.090e-18 Identity = 45/105 (42.86%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 1 VCRVDFLRPDSGDIWYLRLLLHHIAASNWTDLRLYNGELHGSHQAAARARGLVADTEEYDLTFREAIDFS-TPRELRCLFVTLIIAGAPANTLWETHQDALVADY 312
+ R++ +RP G +YLR+LL++ AA ++TDL + NG L+ + Q AARA GL+ +T E + F EA+D TP +LR LF LI+ G A W+ +++ L ADY
Sbjct: 231 ITRMNIIRPCVGKKYYLRMLLNYRAARSFTDLLIVNGILYSNFQDAARAFGLLENTNENEQCFAEAMDNKCTPAQLRLLFCRLILEGMAAQFFWQNYRELLSADY 335
BLAST of mRNA_E-fasciculatus_F_contig15871.4029.1 vs. uniprot
Match: A0A8H7UP69_9FUNG (ATP-dependent DNA helicase n=2 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7UP69_9FUNG) HSP 1 Score: 84.3 bits (207), Expect = 8.120e-17 Identity = 44/105 (41.90%), Postives = 71/105 (67.62%), Query Frame = 1
Query: 7 RVDFLRPDSGDIWYLRLLLHHI-AASNWTDLRLYNGELHGSHQAAARARGLVADTEEYDLTFREAIDFSTPRELRCLFVTLIIAGAPANT--LWETHQDALVADY 312
R+ + P + ++LRLLL+++ A ++ D+R ++G +H + QAAARA+GL+AD E++DL RE+ F +P LR LFVT++I P++ L TH+D+L DY
Sbjct: 853 RIYSVSPKESEKYFLRLLLNYVRGAKSFEDVRTFDGVVHETFQAAARAKGLLADDEQWDLCLRESATFQSPIMLRRLFVTILIFCEPSSPFQLGNTHKDSLSDDY 957
BLAST of mRNA_E-fasciculatus_F_contig15871.4029.1 vs. uniprot
Match: A0A6A4XGJ7_AMPAM (ATP-dependent DNA helicase n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4XGJ7_AMPAM) HSP 1 Score: 82.4 bits (202), Expect = 3.790e-16 Identity = 44/105 (41.90%), Postives = 66/105 (62.86%), Query Frame = 1
Query: 7 RVDFLRPDSGDIWYLRLLLHHI-AASNWTDLRLYNGELHGSHQAAARARGLVADTEEYDLTFREAIDFSTPRELRCLFVTLIIAGAPANT--LWETHQDALVADY 312
RV + P GD++YLRLLLHH+ A+++ +LR G + +HQ A R RGL+ + E+D+T +EA PR+LR L VT+++ PA+ L+E H AL D+
Sbjct: 93 RVVSVSPRQGDVFYLRLLLHHVPGATSFAELRTVAGVVCATHQEACRRRGLLQEDAEWDVTMQEAALVQMPRQLRQLLVTILLFCEPADPAGLFERHYPALAEDF 197
BLAST of mRNA_E-fasciculatus_F_contig15871.4029.1 vs. uniprot
Match: UPI001ED8AC21 (uncharacterized protein LOC124159721 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8AC21) HSP 1 Score: 82.4 bits (202), Expect = 3.870e-16 Identity = 43/103 (41.75%), Postives = 58/103 (56.31%), Query Frame = 1
Query: 1 VCRVDFLRPDSGDIWYLRLLLHHIAASNWTDLRLYNGELHGSHQAAARARGLVADTEEYDLTFREAIDFSTPRELRCLFVTLIIAGAPANTLWETHQDALVAD 309
VCR+ ++ P+ G+++YLR+LL I + DL G + Q AR GL+ D EEY+ REA F LR LFV L GAPA LWET +D++ D
Sbjct: 1158 VCRIHWVSPNRGELYYLRILLMSINCRGYEDLLSRGGNDCRTFQDLARTMGLIEDEEEYNHVIREASTFMVGYRLRSLFVLLCNMGAPAALLWETFKDSICED 1260
BLAST of mRNA_E-fasciculatus_F_contig15871.4029.1 vs. uniprot
Match: A0A8H7UQJ6_9FUNG (ATP-dependent DNA helicase n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7UQJ6_9FUNG) HSP 1 Score: 81.6 bits (200), Expect = 7.050e-16 Identity = 43/105 (40.95%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 7 RVDFLRPDSGDIWYLRLLLHHI-AASNWTDLRLYNGELHGSHQAAARARGLVADTEEYDLTFREAIDFSTPRELRCLFVTLIIAGAPANT--LWETHQDALVADY 312
R+ + P + +YLRLLL+++ A ++ D+R G L+ ++QAAARA+GL+AD E++D E+ F +P LR LFVT+++ P++ LW TH+D L DY
Sbjct: 342 RIYSVSPKESEKYYLRLLLNYVRGAKSFEDMRTVEGVLYETYQAAARAKGLLADDEQWDTCLLESDTFQSPFMLRRLFVTILVFCNPSSPFQLWITHKDNLAYDY 446
BLAST of mRNA_E-fasciculatus_F_contig15871.4029.1 vs. uniprot
Match: UPI001C913DCF (uncharacterized protein LOC122382858 n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C913DCF) HSP 1 Score: 80.9 bits (198), Expect = 1.290e-15 Identity = 45/105 (42.86%), Postives = 65/105 (61.90%), Query Frame = 1
Query: 7 RVDFLRPDSGDIWYLRLLLHHI-AASNWTDLRLYNGELHGSHQAAARARGLVADTEEYDLTFREAIDFSTPRELRCLFVTLIIAGAPAN--TLWETHQDALVADY 312
RV L P GD++YLR+LLHH+ A+ + DLR +G++ +HQ A R RGL+ D +E+ T EA+ P +LR LFV L++ APA+ TL Q A+ D+
Sbjct: 366 RVVSLTPRHGDVFYLRVLLHHVPGATTFADLRTVDGQVCDTHQEACRRRGLLQDDQEWAETLAEAVRTQRPGQLRQLFVVLLLFCAPADPATLLHRFQAAMGEDF 470
BLAST of mRNA_E-fasciculatus_F_contig15871.4029.1 vs. uniprot
Match: A0A6A4VRF7_AMPAM (ATP-dependent DNA helicase n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4VRF7_AMPAM) HSP 1 Score: 80.5 bits (197), Expect = 1.590e-15 Identity = 45/104 (43.27%), Postives = 65/104 (62.50%), Query Frame = 1
Query: 7 RVDFLRPDSGDIWYLRLLLHHI-AASNWTDLRLYNGELHGSHQAAARARGLVADTEEYDLTFREAIDFSTPRELRCLFVTLIIAGAPAN--TLWETHQDALVAD 309
RV L P GD++YLR+LLHH+ A+ +TDLR +G++ +HQ A R RGL+ D +E+ T EA+ P +L+ LFV L++ APA+ TL Q A+ D
Sbjct: 78 RVVSLTPRHGDVFYLRVLLHHVPGATTFTDLRTVDGQVCDTHQEACRRRGLLQDDQEWAETLAEAVRTQRPGQLKQLFVVLLLFCAPADPVTLLHPFQAAMGED 181
BLAST of mRNA_E-fasciculatus_F_contig15871.4029.1 vs. uniprot
Match: A0A6A4X3W9_AMPAM (ATP-dependent DNA helicase n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4X3W9_AMPAM) HSP 1 Score: 79.7 bits (195), Expect = 3.350e-15 Identity = 44/105 (41.90%), Postives = 65/105 (61.90%), Query Frame = 1
Query: 7 RVDFLRPDSGDIWYLRLLLHHI-AASNWTDLRLYNGELHGSHQAAARARGLVADTEEYDLTFREAIDFSTPRELRCLFVTLIIAGAPAN--TLWETHQDALVADY 312
RV L P GD++YLR+LLHH+ A+ + DLR +G++ +HQ A R RGL+ D +E+ T EA+ P +LR LFV +++ APA+ TL Q A+ D+
Sbjct: 684 RVVSLTPRHGDVFYLRVLLHHVPGATTFADLRTVDGQVCDTHQEACRRRGLLQDDQEWAETLAEAVRTQRPGQLRQLFVVVLLFCAPADPATLLHRFQAAMGEDF 788 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15871.4029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15871.4029.1 >prot_E-fasciculatus_F_contig15871.4029.1 ID=prot_E-fasciculatus_F_contig15871.4029.1|Name=mRNA_E-fasciculatus_F_contig15871.4029.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=104bp VCRVDFLRPDSGDIWYLRLLLHHIAASNWTDLRLYNGELHGSHQAAARARback to top mRNA from alignment at E-fasciculatus_F_contig15871:1184..1495+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15871.4029.1 ID=mRNA_E-fasciculatus_F_contig15871.4029.1|Name=mRNA_E-fasciculatus_F_contig15871.4029.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=312bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15871:1184..1495+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15871:1184..1495+ >mRNA_E-fasciculatus_F_contig15871.4029.1 ID=mRNA_E-fasciculatus_F_contig15871.4029.1|Name=mRNA_E-fasciculatus_F_contig15871.4029.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=624bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15871:1184..1495+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |