prot_E-fasciculatus_F_contig1587.4025.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1587.4025.1
Unique Nameprot_E-fasciculatus_F_contig1587.4025.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length305
Homology
BLAST of mRNA_E-fasciculatus_F_contig1587.4025.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 1.110e-42
Identity = 78/86 (90.70%), Postives = 81/86 (94.19%), Query Frame = 0
Query:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLTTWHGVEVNDQGRVVKLKLRDNNLEGEIPATLGQLGNLQQLRLSWNKLSGKWF 86
            MAQTDRDALV LYRATGGENWRE QNWDTDADL TWHGV+VNDQGRVVKLKLRDNNLEGEIPATLG+LGNLQQL LS NKLSG+WF
Sbjct:    1 MAQTDRDALVVLYRATGGENWRERQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKLGNLQQLHLSSNKLSGRWF 86          
BLAST of mRNA_E-fasciculatus_F_contig1587.4025.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 4.360e-41
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 0
Query:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLTTWHGVEVNDQGRVVKLKLRDNNLEGEIPATLGQLGNLQQ 73
            MAQTDRDALVALYRATGGENWRESQNWDTDADL TWHGV+VNDQGRVVKLKLRDNNLEGEIPATLGQL NLQQ
Sbjct:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQQ 73          
BLAST of mRNA_E-fasciculatus_F_contig1587.4025.1 vs. uniprot
Match: A0A6H5K3C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3C2_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 5.060e-26
Identity = 49/59 (83.05%), Postives = 52/59 (88.14%), Query Frame = 0
Query:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLTTWHGVEVNDQGRVVKLKLRDNNLEG 59
            MAQTDRDALVA+YRATGGE W  SQNWDTD+DL TWHGV VNDQGRVVKL+L  NNLEG
Sbjct:    1 MAQTDRDALVAMYRATGGEKWSTSQNWDTDSDLKTWHGVNVNDQGRVVKLELGFNNLEG 59          
BLAST of mRNA_E-fasciculatus_F_contig1587.4025.1 vs. uniprot
Match: A0A6H5K3D6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D6_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 3.470e-25
Identity = 51/80 (63.75%), Postives = 58/80 (72.50%), Query Frame = 0
Query:    4 TDRDALVALYRATGGENWRESQNWDTDADLTTWHGVEVNDQGRVVKLKLRDNNLEGEIPATLGQLGNLQQLRLSWNKLSG 83
            TDR ALVAL+ ATGG NW+++  W+TDA L  W+GVEVND GRVVKL LR NNL+G IP  LG LG L  L L  NKL G
Sbjct:   11 TDRAALVALFNATGGANWKKNTKWNTDAPLGQWYGVEVNDAGRVVKLSLRYNNLKGHIPRQLGDLGALMTLNLGVNKLEG 90          
BLAST of mRNA_E-fasciculatus_F_contig1587.4025.1 vs. uniprot
Match: A0A6H5K8T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T5_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 1.130e-22
Identity = 50/81 (61.73%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    4 TDRDALVALYRATGGENWRESQNWDTDADLTTWHGVEVNDQGRVVKLKLRDNNLEGEIPATLGQLGNLQQLRLSWNKLSGK 84
            TDRDALVALY AT G NW+  QNW+TD  L  W GVE NDQGRVV L L DN L G IP+ LG L  LQ+L L  N+L G+
Sbjct:  111 TDRDALVALYDATDGANWKSKQNWNTDLPLGRWRGVEANDQGRVVGLDLPDNKLHGHIPSDLGHLSALQKLNLLSNQLIGE 191          
BLAST of mRNA_E-fasciculatus_F_contig1587.4025.1 vs. uniprot
Match: D8LF65_ECTSI (Hypothetical leucine-rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF65_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 1.230e-22
Identity = 46/77 (59.74%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLTTWHGVEVNDQGRVVKLKLRDNNLEGEIPATLGQLGNLQQLRLS 77
            M+  DR AL+AL+R+T G NW+ + NWDTDA+L TW GVEVND+GRVV+L L DNNL G IP  LG L  L  L +S
Sbjct:    1 MSTMDRAALIALFRSTDGANWKTNSNWDTDAELATWAGVEVNDEGRVVQLILPDNNLHGPIPEALGTLNELTHLSMS 77          
BLAST of mRNA_E-fasciculatus_F_contig1587.4025.1 vs. uniprot
Match: D8LL09_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL09_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 2.510e-22
Identity = 47/77 (61.04%), Postives = 58/77 (75.32%), Query Frame = 0
Query:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLTTWHGVEVNDQGRVVKLKLRDNNLEGEIPATLGQLGNLQQLRLS 77
            M QTDRDALVALY A GG NW+ + NW+ DADL+ WHG+ +NDQGRVV++ L  NNL+G IP  LG L  L++L LS
Sbjct:   51 MPQTDRDALVALYDAAGGFNWKNNGNWNADADLSKWHGININDQGRVVEVHLAANNLQGSIPEALGALSKLERLWLS 127          
BLAST of mRNA_E-fasciculatus_F_contig1587.4025.1 vs. uniprot
Match: D8LFJ9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFJ9_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 8.340e-22
Identity = 49/78 (62.82%), Postives = 56/78 (71.79%), Query Frame = 0
Query:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLTTWHGVEVNDQGRVVKLKLRDNNLEGEIPATLGQLGNLQQLRLSW 78
            MAQTDR+ALVALY A GG  WR ++NW+T A L+ WHGVEVN QGRVV L L DNNL+G IP    +LGNL  L   W
Sbjct:   25 MAQTDREALVALYTAIGGAKWRNNRNWNTSAALSQWHGVEVNSQGRVVNLFLWDNNLQGRIPT---ELGNLHMLDTLW 99          
BLAST of mRNA_E-fasciculatus_F_contig1587.4025.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 3.740e-21
Identity = 48/74 (64.86%), Postives = 55/74 (74.32%), Query Frame = 0
Query:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLTTWHGVEVNDQGRVVKLKLRDNNLEGEIPATLGQLGNLQQL 74
            MA TDR+ALVAL+R+TGG  WR+  NWDTDA + TWHGVEVN QGRVV L L  N+L G IP  LG L  LQ+L
Sbjct:    1 MASTDREALVALFRSTGGAGWRQRGNWDTDAAIATWHGVEVNAQGRVVNLSLGGNSLRGHIPPELGALSELQEL 74          
BLAST of mRNA_E-fasciculatus_F_contig1587.4025.1 vs. uniprot
Match: D7FXI0_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI0_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 4.880e-21
Identity = 44/68 (64.71%), Postives = 51/68 (75.00%), Query Frame = 0
Query:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLTTWHGVEVNDQGRVVKLKLRDNNLEGEIPATLGQL 68
            M+ TDR+AL+AL+R+TGG  W    NWDTDA L TWHGV+VNDQGRVV L L  NNL+G IP  LG L
Sbjct:    1 MSSTDREALIALFRSTGGAGWMRRDNWDTDAVLGTWHGVKVNDQGRVVMLSLDQNNLQGHIPRQLGDL 68          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1587.4025.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBY3_ECTSI1.110e-4290.70Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JK91_9PHAE4.360e-4195.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3C2_9PHAE5.060e-2683.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3D6_9PHAE3.470e-2563.75Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K8T5_9PHAE1.130e-2261.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF65_ECTSI1.230e-2259.74Hypothetical leucine-rich repeat protein n=1 Tax=E... [more]
D8LL09_ECTSI2.510e-2261.04Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D8LFJ9_ECTSI8.340e-2262.82Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FX56_ECTSI3.740e-2164.86LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FXI0_ECTSI4.880e-2164.71Hypothetical leucine rich repeat protein n=1 Tax=E... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 197..210
score: 53.77
coord: 290..303
score: 45.35
NoneNo IPR availablePANTHERPTHR27008:SF281coord: 52..168
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 143..261
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 52..168
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 92..218
coord: 216..305
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 4..120
NoneNo IPR availablePANTHERPTHR27008:SF281coord: 92..218
NoneNo IPR availablePANTHERPTHR27008:SF281coord: 216..305
NoneNo IPR availablePANTHERPTHR27008:SF281coord: 143..261
coord: 4..120
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 4..304
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 194..217
e-value: 6.4
score: 14.8
coord: 242..265
e-value: 65.0
score: 6.6
coord: 146..169
e-value: 93.0
score: 5.3
coord: 218..241
e-value: 76.0
score: 6.1
coord: 266..290
e-value: 4.7
score: 15.9
coord: 68..88
e-value: 110.0
score: 4.6
coord: 170..193
e-value: 24.0
score: 10.1
coord: 98..122
e-value: 44.0
score: 8.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..164
e-value: 2.3E-46
score: 159.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 165..305
e-value: 1.8E-45
score: 156.9
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 99..159
e-value: 1.9E-7
score: 30.7
coord: 172..231
e-value: 4.7E-10
score: 39.1
coord: 243..303
e-value: 1.1E-7
score: 31.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1587contigE-fasciculatus_F_contig1587:5874..15121 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1587.4025.1mRNA_E-fasciculatus_F_contig1587.4025.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1587 770..15121 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1587.4025.1 ID=prot_E-fasciculatus_F_contig1587.4025.1|Name=mRNA_E-fasciculatus_F_contig1587.4025.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=305bp
MAQTDRDALVALYRATGGENWRESQNWDTDADLTTWHGVEVNDQGRVVKL
KLRDNNLEGEIPATLGQLGNLQQLRLSWNKLSGKWFQAGYIPKELGDLSQ
LQALELYRNQLTGPIPEELGALSNLLWLSLYSNQLTGEIPATLGQLGKLE
ELNLSWNKLGGPIPEVLGALGNLRELLLSSNQLTDEIPATLGQLGNLQHL
DLSWNKLTGYIPQELGGLSQLQTLWLYFNQLTGPIPEALGALSNLRDLSL
YSNRLTDEIPATLGQLGNLQQLRLSWNKLSGHIPQELGALSQLQTLGLHH
NRLTG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf
IPR003591Leu-rich_rpt_typical-subtyp