mRNA_E-fasciculatus_F_contig15869.4024.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15869.4024.1 vs. uniprot
Match: D7FLG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG3_ECTSI) HSP 1 Score: 134 bits (337), Expect = 6.030e-35 Identity = 70/71 (98.59%), Postives = 70/71 (98.59%), Query Frame = 1
Query: 7 RYDKLKEDFKFNLGLIEDRDAELGRYEAALQGLKESLRDKEVEASEVKMRLDEALCVNRQAAARENEQQGY 219
RYDKLKEDFKFNLGLIEDRD ELGRYEAALQGLKESLRDKEVEASEVKMRLDEALCVNRQAAARENEQQGY
Sbjct: 200 RYDKLKEDFKFNLGLIEDRDVELGRYEAALQGLKESLRDKEVEASEVKMRLDEALCVNRQAAARENEQQGY 270
BLAST of mRNA_E-fasciculatus_F_contig15869.4024.1 vs. uniprot
Match: A0A7S2WNF5_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WNF5_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 1.880e-10 Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 7 RYDKLKEDFKFNLGLIEDRDAELGRYEAALQGLKESLRDKEVEASEVKMRLDEALCVNRQAAARENEQQGY 219
R+ KLKEDF++NL LIEDRD EL +Y+AA +K +RDKE E S++K+++ E ++A + NE +GY
Sbjct: 133 RFSKLKEDFQYNLKLIEDRDTELTKYDAAFAQVKSVVRDKEGEVSDLKIQVAEVETQLKRATNKSNELEGY 203
BLAST of mRNA_E-fasciculatus_F_contig15869.4024.1 vs. uniprot
Match: A0A7S4DI13_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DI13_HETAK) HSP 1 Score: 61.2 bits (147), Expect = 7.150e-10 Identity = 35/61 (57.38%), Postives = 39/61 (63.93%), Query Frame = 1
Query: 1 ANRYDKLKEDFKFNLGLIEDRDAELGRYEAALQGLKESLRDKEVEASEVKMRLDEALCVNR 183
A R+ KLKEDFKFNL LIE+RDAEL RY+ + LK SLR E ASE DEA R
Sbjct: 114 AARFKKLKEDFKFNLNLIEERDAELQRYDTTVLALKASLRGAEAAASEAAAARDEAEAQRR 174
BLAST of mRNA_E-fasciculatus_F_contig15869.4024.1 vs. uniprot
Match: A0A2R5GES0_9STRA (Proteasome assembly chaperone 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GES0_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 1.490e-8 Identity = 34/69 (49.28%), Postives = 47/69 (68.12%), Query Frame = 1
Query: 7 RYDKLKEDFKFNLGLIEDRDAELGRYEAALQGLKESLRDKEVEASEVKMRLDEALCVNRQAA--ARENE 207
++ KL EDF +NL LI DRDAEL +++ A +KE + DKE EASE++M++D+ AA ARENE
Sbjct: 387 KFAKLSEDFNYNLQLIADRDAELDKFDTAFAKVKEIISDKEAEASELRMQIDDLEAQLEAAAVRARENE 455
BLAST of mRNA_E-fasciculatus_F_contig15869.4024.1 vs. uniprot
Match: A0A813RYQ2_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813RYQ2_9BILA) HSP 1 Score: 57.0 bits (136), Expect = 9.710e-8 Identity = 26/58 (44.83%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 7 RYDKLKEDFKFNLGLIEDRDAELGRYEAALQGLKESLRDKEVEASEVKMRLDEALCVN 180
++++LKEDFKFNL L+E+RD+EL ++E L +++ L DK E SE+K+++D+ +N
Sbjct: 45 KFNQLKEDFKFNLKLLEERDSELEKFEQTLTNVRKQLSDKNAEISELKIKIDDFKKLN 102
BLAST of mRNA_E-fasciculatus_F_contig15869.4024.1 vs. uniprot
Match: A0A433T866_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433T866_ELYCH) HSP 1 Score: 56.6 bits (135), Expect = 1.330e-7 Identity = 29/73 (39.73%), Postives = 48/73 (65.75%), Query Frame = 1
Query: 4 NRYDKLKEDFKFNLGLIEDRDAELGRYEAALQGLKESLRDKEVEASEVKMRLDEAL-CVNRQAAARENEQQGY 219
+++ +LKE FK+NL L+EDRD EL +Y+ + Q ++ SL K E SE+K+R+D+ +NR+ ++ Q Y
Sbjct: 47 SKFHELKEHFKYNLKLLEDRDRELEKYDISFQEMRSSLNSKNAELSELKIRIDDLKNVINREEKTKDELQANY 119
BLAST of mRNA_E-fasciculatus_F_contig15869.4024.1 vs. uniprot
Match: UPI001E1D61AE (coiled-coil domain-containing protein 57-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D61AE) HSP 1 Score: 56.2 bits (134), Expect = 1.820e-7 Identity = 33/72 (45.83%), Postives = 43/72 (59.72%), Query Frame = 1
Query: 7 RYDKLKEDFKFNLGLIEDRDAELGRYEAALQGLKESLRDKEVEASEVKMRLDEALC-VNRQAAARENEQQGY 219
++ KLKEDFK+NL L+E RD EL RY+A +K L K E SE K+ +DE VN + +RE Q Y
Sbjct: 50 KFQKLKEDFKYNLRLLEQRDQELDRYDATFSDIKAQLNAKNAEVSECKIHVDELRTQVNCEVKSREELQLHY 121
BLAST of mRNA_E-fasciculatus_F_contig15869.4024.1 vs. uniprot
Match: C3Y945_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Y945_BRAFL) HSP 1 Score: 53.9 bits (128), Expect = 7.300e-7 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 1
Query: 7 RYDKLKEDFKFNLGLIEDRDAELGRYEAALQGLKESLRDKEVEASEVKMRLDEA-LCVNRQAAARENEQQGY 219
++ KLKEDFK+NL L+E+RD EL RY+A +K K E SE+K+ D+ V+R+ AAR Q+ Y
Sbjct: 51 KFQKLKEDFKYNLRLLEERDKELERYDAVFAEMKAKESAKNAEMSELKIAQDDLRTAVSREEAARAELQKHY 122
BLAST of mRNA_E-fasciculatus_F_contig15869.4024.1 vs. uniprot
Match: A0A1S3HQW7_LINUN (coiled-coil domain-containing protein 57-like n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HQW7_LINUN) HSP 1 Score: 54.3 bits (129), Expect = 8.710e-7 Identity = 34/73 (46.58%), Postives = 48/73 (65.75%), Query Frame = 1
Query: 7 RYDKLKEDFKFNLGLIEDRDAELGRYEAALQGLKESLRDKEVEASEVKMRLDEALCVN--RQAAARENEQQGY 219
++ KLKEDFK+NL L+E+RD EL RY+A LK ++ K E SE+K++ DE LC + R+ A+E Q Y
Sbjct: 51 KFMKLKEDFKYNLKLLEERDVELERYDAIFGELKAAINAKNGEISEMKIQQDE-LCASLKREEHAKEQLQMHY 122
BLAST of mRNA_E-fasciculatus_F_contig15869.4024.1 vs. uniprot
Match: A0A6P4XUC6_BRABE (coiled-coil domain-containing protein 57-like n=4 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4XUC6_BRABE) HSP 1 Score: 54.3 bits (129), Expect = 8.710e-7 Identity = 33/72 (45.83%), Postives = 45/72 (62.50%), Query Frame = 1
Query: 7 RYDKLKEDFKFNLGLIEDRDAELGRYEAALQGLKESLRDKEVEASEVKMRLDEA-LCVNRQAAARENEQQGY 219
++ KLKEDFK+NL L+E+RD EL RY+A LK K E SE+K++ DE V+R+ AR Q+ Y
Sbjct: 51 KFQKLKEDFKYNLRLLEERDKELERYDAVFAELKAVENAKNAEMSELKIQQDELRTAVSREETARVELQKHY 122 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15869.4024.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15869.4024.1 >prot_E-fasciculatus_F_contig15869.4024.1 ID=prot_E-fasciculatus_F_contig15869.4024.1|Name=mRNA_E-fasciculatus_F_contig15869.4024.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=73bp ANRYDKLKEDFKFNLGLIEDRDAELGRYEAALQGLKESLRDKEVEASEVKback to top mRNA from alignment at E-fasciculatus_F_contig15869:1792..2445+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15869.4024.1 ID=mRNA_E-fasciculatus_F_contig15869.4024.1|Name=mRNA_E-fasciculatus_F_contig15869.4024.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=654bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15869:1792..2445+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15869:1792..2445+ >mRNA_E-fasciculatus_F_contig15869.4024.1 ID=mRNA_E-fasciculatus_F_contig15869.4024.1|Name=mRNA_E-fasciculatus_F_contig15869.4024.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=438bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15869:1792..2445+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |