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Homology
BLAST of mRNA_E-fasciculatus_F_contig1586.4019.1 vs. uniprot
Match: D7FJC8_ECTSI (Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJC8_ECTSI) HSP 1 Score: 160 bits (404), Expect = 9.770e-45 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1
Query: 1 ASQLGQIDVIQELIAADAIELNAQDGNGWTPLMHACARGHRSVVGALLTAGASVDIESHDGRTALHRAATWKRLGPLDQ 237
ASQLGQIDVIQELIAADAIELNAQDGNGWTPLMHACARGHRSVVGALLTAGASVDIESHDGRTALHRAATWKRLGPLDQ
Sbjct: 50 ASQLGQIDVIQELIAADAIELNAQDGNGWTPLMHACARGHRSVVGALLTAGASVDIESHDGRTALHRAATWKRLGPLDQ 128
BLAST of mRNA_E-fasciculatus_F_contig1586.4019.1 vs. uniprot
Match: UPI001EE55FC7 (putative ankyrin repeat protein RF_0381 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE55FC7) HSP 1 Score: 58.2 bits (139), Expect = 1.040e-5 Identity = 25/64 (39.06%), Postives = 37/64 (57.81%), Query Frame = 1
Query: 13 GQIDVIQELIAADAIELNAQDGNGWTPLMHACARGHRSVVGALLTAGASVDIESHDGRTALHRA 204
G +++ Q L+ D + ++ QDG GWTP+MHA GH+ V L+ GA + + D T LH A
Sbjct: 250 GNVEITQYLLKHDIVNIDCQDGKGWTPIMHAAMSGHKGVFDVLVDEGADLSLLCDDKETILHVA 313
BLAST of mRNA_E-fasciculatus_F_contig1586.4019.1 vs. uniprot
Match: A0A1V6RZL9_9EURO (BZIP domain-containing protein n=1 Tax=Penicillium vulpinum TaxID=29845 RepID=A0A1V6RZL9_9EURO) HSP 1 Score: 55.5 bits (132), Expect = 5.300e-5 Identity = 29/77 (37.66%), Postives = 46/77 (59.74%), Query Frame = 1
Query: 1 ASQLGQIDVIQELIAADAIELNAQDGNGWTPLMHACARGHRSVVGALLTAGASVDIESHDGRTALHRAATWKRLGPL 231
A+Q G +++ L+ I++N QD +G TPL++A H VV LL+ GA + + +GR+ LH A ++RLG L
Sbjct: 198 AAQKGHERIVRVLLIRGNIDVNNQDSDGRTPLIYAIIENHDPVVRLLLSHGARIAVYDREGRSGLHWAVLYRRLGIL 274
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 160.2 |
| Seed ortholog evalue | 1.6e-36 |
| Seed eggNOG ortholog | 2880.D7FJC8 |
| Preferred name | ANKRD42 |
| KEGG ko | ko:K06694,ko:K15502,ko:K17593 |
| EggNOG free text desc. | proteasome regulatory particle assembly |
| EggNOG OGs | COG0666@1,KOG4412@2759 |
| COG Functional cat. | L |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01009,ko03051,ko03400 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Ankyrin repeat-containing domain |
| Ec32 ortholog | Ec-14_005850.1 |
| Exons | 4 |
| Model size | 1005 |
| Cds size | 1005 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1586.4019.1 >prot_E-fasciculatus_F_contig1586.4019.1 ID=prot_E-fasciculatus_F_contig1586.4019.1|Name=mRNA_E-fasciculatus_F_contig1586.4019.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=335bp
ASQLGQIDVIQELIAADAIELNAQDGNGWTPLMHACARGHRSVVGALLTA
GASVDIESHDGRTALHRAATWKRLGPLDQLIEAGADVRHGARNKWTPLHC
AAAAGDAHACSILVGAGADVDAQDIFGLKAADVVADFTTTDLVKRALTQA
PQGTPPRSSRALSTRLSSTPSSGSNGAAAAAAATPTVAAATAAAAAVAAG
AGTTICKLPIESLGGRVDLLSSATATAGDGATTGVDVKRGSWSRPVGPRP
LPGGTNRSGGGSDSLRSCGSVKPSSAPRRLSRHQVAVVGLEAHMGPELLG
NGGEVGVSGHERSGAGEPGIEDKSSPRDENVIVS* back to topmRNA from alignment at E-fasciculatus_F_contig1586:3919..6257- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig1586.4019.1 ID=mRNA_E-fasciculatus_F_contig1586.4019.1|Name=mRNA_E-fasciculatus_F_contig1586.4019.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2339bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1586:3919..6257- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GCTTCGCAGTTAGGTCAAATCGATGTCATTCAGGAGTTAATAGCAGCGGA
CGCAATCGAATTGAACGCGCAGGACGGCAACGGGTGGACCCCTCTCATGC
ACGCCTGCGCCCGCGGGTGAGTGGGTAGCAGTCGTGGTTGTGCGGCAATC
AGTCCAGTACATGAACTGAGCAAACCGGATCTTGTAGCTGCCCCCATGCA
CGGCAAGACTCACAAAATGTGGATGTGAGGCTTTTTGGTGTGCAAAAGCG
AACCAGTCAACCCGTAGCTGCATGCTTCTTGCACTCGCAGGGTGCAAGAA
CAAGCAATACGTTGGGTCGCACGTGACTTGTACGGCGATATCAATTCAGT
AAGAAAAATACGTACAACCAAGCGCTTCCTTCGCGCCAAACAAGGTGGGA
GGGAGGGTTTTTTCCTTGAAGAGCGACGCCCCGAGGCTATCTCGAGATGT
TCTTTGCATGTGAGGTCTTTTCTTTTGAGAAGGTACAACTGGTTCAAGGG
GCTCGCGGGTAAACGAGTTGTCTAAATGAAATGGATGTGTTGACATGTTG
ACAGGGAGTGAACGCAGTCCGTGCTCGTCATTGCCAACCGCTGATGGTTG
TCCAACGTTGTACGAAACAATCAGGCACAGGTCAGTCGTAGGGGCATTGC
TGACCGCCGGAGCTAGTGTGGATATCGAGAGCCACGACGGACGAACCGCA
TTGCATCGAGCAGCGACTTGGAAACGACTGGGACCCCTCGACCAAGTACG
TTGCAAACAACAAGCGTGGGAGAAAACAACTCACGAGAGCGCTGACGTGA
ACAAACCCGTACCGAAATTGTGGTTGCGAAGATAAGGATGTTACAAACAC
TAAGAGAAAACAAAATCGGCGATCTTCGGGCTCATGGGTGCCAATGTGGA
GCCGACCCTTCCCCCTTACACGCCATGCTCTGACCGTTCCGGCCGATTTG
AGACAGATCGTTCGGTAGTCACACCCATTTCGTGGTCACTCTGTTGCTTC
CATAACGTGCTCGTTTTTTCCCGGCAAACGTGTGTATTTGGAGCGCTGAC
AGCTCGACCAGGAGTACAACGGCAATTGACGAGGTCTCGCACGTCACTAC
TGCTGTAGGCAAGCGAAAGAAACCGCGTGCCCGTTGTTGCTTGAAACAAT
TATATTCTTTCTTCAGCTCATCGAAGCTGGTGCAGACGTGCGGCACGGGG
CGCGAAACAAGTGGACCCCCCTTCACTGTGCAGCGGCAGCTGGAGATGCG
CACGCCTGCTCAATTCTGGTGGGGGCGGGAGCTGACGTGGACGCACAGGT
GCAAGAACTCAAGCAAAAAAACGGCGTTGGTCCCAGGGGACAGTTTGGGC
AGATTTTTTTTTCCCGTTTGTGTTGCATTTTTCAGTTGCCACCCGCCCTT
CTTCATGCTACGCATGTGACACTCTGTCTGAGTCACTTATTCTCACTGTC
CCCTCGTCTCAGGTATGAAGTGTTTCCTCACATCCCGTATAGTAAAACCT
CACTCCCTGAAACGAACGTGCTCGCCCACACACGCCCGATGTGAGCTACG
TTCAGCGCCGAGAAGACAACGTCATGGAGCAGGCAGGATCTGCCAGCGAT
GACCCCAAGCAGAAATCAATGAAGTGGGTGCTTGCCTTCCCATGCTGTCG
CGTTGCCAACCATCTTCTCTCTGTTCTGCTACTTTCTCGCTCATCGATTC
AAGGACATCTTCGGCCTCAAAGCCGCCGATGTGGTTGCCGATTTTACAAC
AACAGACCTGGTGAAGAGAGCTCTCACCCAAGCACCACAGGGTACCCCGC
CGCGATCGTCAAGAGCTTTGTCGACGAGACTTTCGTCGACGCCGTCGTCG
GGCTCGAACGGCGCGGCTGCCGCTGCCGCTGCCACTCCTACCGTAGCTGC
AGCCACCGCTGCTGCTGCAGCTGTTGCTGCCGGAGCGGGCACCACCATAT
GCAAGCTGCCGATCGAATCTTTGGGCGGGAGAGTGGATCTACTGAGTAGC
GCGACGGCGACGGCGGGTGACGGGGCCACAACCGGGGTTGACGTAAAGCG
TGGTAGCTGGAGCAGACCGGTGGGGCCCCGGCCTCTTCCAGGGGGCACCA
ACCGCAGTGGCGGTGGCAGCGATAGCTTGCGCAGCTGCGGCTCTGTGAAG
CCGAGCAGCGCCCCCAGAAGATTATCGAGACACCAGGTGGCGGTGGTGGG
GTTGGAGGCGCATATGGGGCCCGAGCTCCTGGGAAATGGTGGAGAAGTCG
GCGTTTCGGGACACGAAAGGAGCGGGGCGGGAGAGCCGGGCATTGAAGAT
AAGAGTAGCCCAAGAGACGAGAACGTTATAGTGTCGTAG back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig1586:3919..6257- >mRNA_E-fasciculatus_F_contig1586.4019.1 ID=mRNA_E-fasciculatus_F_contig1586.4019.1|Name=mRNA_E-fasciculatus_F_contig1586.4019.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2010bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1586:3919..6257- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GCTTCGCAGTTAGGTCAAATCGATGTCATTCAGGAGTTAATAGCAGCGGA
CGCAATCGAATTGAACGCGCAGGACGGCAACGGGTGGACCCCTCTCATGC
ACGCCTGCGCCCGCGGGCTTCGCAGTTAGGTCAAATCGATGTCATTCAGG
AGTTAATAGCAGCGGACGCAATCGAATTGAACGCGCAGGACGGCAACGGG
TGGACCCCTCTCATGCACGCCTGCGCCCGCGGGCACAGGTCAGTCGTAGG
GGCATTGCTGACCGCCGGAGCTAGTGTGGATATCGAGAGCCACGACGGAC
GAACCGCATTGCATCGAGCAGCGACTTGGAAACGACTGGGACCCCTCGAC
CAAGCACAGGTCAGTCGTAGGGGCATTGCTGACCGCCGGAGCTAGTGTGG
ATATCGAGAGCCACGACGGACGAACCGCATTGCATCGAGCAGCGACTTGG
AAACGACTGGGACCCCTCGACCAACTCATCGAAGCTGGTGCAGACGTGCG
GCACGGGGCGCGAAACAAGTGGACCCCCCTTCACTGTGCAGCGGCAGCTG
GAGATGCGCACGCCTGCTCAATTCTGGTGGGGGCGGGAGCTGACGTGGAC
GCACAGCTCATCGAAGCTGGTGCAGACGTGCGGCACGGGGCGCGAAACAA
GTGGACCCCCCTTCACTGTGCAGCGGCAGCTGGAGATGCGCACGCCTGCT
CAATTCTGGTGGGGGCGGGAGCTGACGTGGACGCACAGGACATCTTCGGC
CTCAAAGCCGCCGATGTGGTTGCCGATTTTACAACAACAGACCTGGTGAA
GAGAGCTCTCACCCAAGCACCACAGGGTACCCCGCCGCGATCGTCAAGAG
CTTTGTCGACGAGACTTTCGTCGACGCCGTCGTCGGGCTCGAACGGCGCG
GCTGCCGCTGCCGCTGCCACTCCTACCGTAGCTGCAGCCACCGCTGCTGC
TGCAGCTGTTGCTGCCGGAGCGGGCACCACCATATGCAAGCTGCCGATCG
AATCTTTGGGCGGGAGAGTGGATCTACTGAGTAGCGCGACGGCGACGGCG
GGTGACGGGGCCACAACCGGGGTTGACGTAAAGCGTGGTAGCTGGAGCAG
ACCGGTGGGGCCCCGGCCTCTTCCAGGGGGCACCAACCGCAGTGGCGGTG
GCAGCGATAGCTTGCGCAGCTGCGGCTCTGTGAAGCCGAGCAGCGCCCCC
AGAAGATTATCGAGACACCAGGTGGCGGTGGTGGGGTTGGAGGCGCATAT
GGGGCCCGAGCTCCTGGGAAATGGTGGAGAAGTCGGCGTTTCGGGACACG
AAAGGAGCGGGGCGGGAGAGCCGGGCATTGAAGATAAGAGTAGCCCAAGA
GACGAGAACGTTATAGTGTCGTAGGACATCTTCGGCCTCAAAGCCGCCGA
TGTGGTTGCCGATTTTACAACAACAGACCTGGTGAAGAGAGCTCTCACCC
AAGCACCACAGGGTACCCCGCCGCGATCGTCAAGAGCTTTGTCGACGAGA
CTTTCGTCGACGCCGTCGTCGGGCTCGAACGGCGCGGCTGCCGCTGCCGC
TGCCACTCCTACCGTAGCTGCAGCCACCGCTGCTGCTGCAGCTGTTGCTG
CCGGAGCGGGCACCACCATATGCAAGCTGCCGATCGAATCTTTGGGCGGG
AGAGTGGATCTACTGAGTAGCGCGACGGCGACGGCGGGTGACGGGGCCAC
AACCGGGGTTGACGTAAAGCGTGGTAGCTGGAGCAGACCGGTGGGGCCCC
GGCCTCTTCCAGGGGGCACCAACCGCAGTGGCGGTGGCAGCGATAGCTTG
CGCAGCTGCGGCTCTGTGAAGCCGAGCAGCGCCCCCAGAAGATTATCGAG
ACACCAGGTGGCGGTGGTGGGGTTGGAGGCGCATATGGGGCCCGAGCTCC
TGGGAAATGGTGGAGAAGTCGGCGTTTCGGGACACGAAAGGAGCGGGGCG
GGAGAGCCGGGCATTGAAGATAAGAGTAGCCCAAGAGACGAGAACGTTAT
AGTGTCGTAG back to top
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