mRNA_E-fasciculatus_F_contig15858.4018.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15858.4018.1 vs. uniprot
Match: D7FKG6_ECTSI (Zinc finger, CW-type with coiled-coil domain 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG6_ECTSI) HSP 1 Score: 394 bits (1012), Expect = 1.290e-122 Identity = 213/257 (82.88%), Postives = 219/257 (85.21%), Query Frame = 2
Query: 2 GSMGRDAVASLLRAAESSRMEVGPSP-EVRSGGRGGAGAAAAGMHAAARSDGSGG-----AVFEVPPKADQWVMCDYAHCGKWRRVPPGVSVQGIDKWYCPMGTWNPSASCEQPEDSTSIPTPATNGTAGGRSFVVRGGAGSRGGGXGASVRGRRIGSRARATSESADATEERSWRRDPGSGSGLERRESDAGSRGXXXXXXXSKKDDVLWVQCDRCLRWRKLALGMRLENLPDKWYCKMNTWSPANHCSYPDEYDA 754
GSMGRDAVASLLRAAESSR E+ P+P +VRSGGR AVFE PPKADQWVMCDYAHCGKWRRVPPGVSVQGIDKWYC MGTWNPSASCEQPEDSTSIPTPATNGTAGGRSFVVRGGAGSRGGG ASVRGRRIGSRARA SES DA++ER+WRRDPGSGSGLER ESDAGSRG XXXXX SKKDDVLWVQCDRCLRWRKLALGMRLENLPDKWYCKMNTWSPANHCSYPDEYDA
Sbjct: 1936 GSMGRDAVASLLRAAESSRGEIAPAPPKVRSGGRXXXXXXXXXXXXXXXXXXXXXXXXXXAVFEAPPKADQWVMCDYAHCGKWRRVPPGVSVQGIDKWYCHMGTWNPSASCEQPEDSTSIPTPATNGTAGGRSFVVRGGAGSRGGG--ASVRGRRIGSRARAASESVDASDERAWRRDPGSGSGLERHESDAGSRGGXXXXXRSKKDDVLWVQCDRCLRWRKLALGMRLENLPDKWYCKMNTWSPANHCSYPDEYDA 2190
BLAST of mRNA_E-fasciculatus_F_contig15858.4018.1 vs. uniprot
Match: A0A6H5KUK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUK1_9PHAE) HSP 1 Score: 379 bits (973), Expect = 2.250e-117 Identity = 203/258 (78.68%), Postives = 208/258 (80.62%), Query Frame = 2
Query: 2 GSMGRDAVASLLRAAESSRMEVGPSP-EVRSGGRGGAGAAAAGMHAAARSDGSGG------AVFEVPPKADQWVMCDYAHCGKWRRVPPGVSVQGIDKWYCPMGTWNPSASCEQPEDSTSIPTPATNGTAGGRSFVVRGGAGSRGGGXGASVRGRRIGSRARATSESADATEERSWRRDPGSGSGLERRESDAGSRGXXXXXXXSKKDDVLWVQCDRCLRWRKLALGMRLENLPDKWYCKMNTWSPANHCSYPDEYDA 754
GSMGRDAVASLLRAAESS+ EV P+P E RS AVFE PPKADQWVMCDYAHCGKWRRVPPGVSVQGIDKWYC MGTWNP+ASCEQPEDSTSIPTPATNGTAGGRSFVVRGGAGSRG X SVRGRRIGSRARATSES DA +ER+WRRDPGS SGLERRESDAGSRG SKKDDVLWVQCDRCLRWRKLALGMRLENLPDKWYCKMNTWSPANHCSYPDEYDA
Sbjct: 1999 GSMGRDAVASLLRAAESSQGEVAPAPPEDRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVFEAPPKADQWVMCDYAHCGKWRRVPPGVSVQGIDKWYCHMGTWNPAASCEQPEDSTSIPTPATNGTAGGRSFVVRGGAGSRGXXXXGSVRGRRIGSRARATSESVDAADERAWRRDPGSCSGLERRESDAGSRGGGRGRGRSKKDDVLWVQCDRCLRWRKLALGMRLENLPDKWYCKMNTWSPANHCSYPDEYDA 2256
BLAST of mRNA_E-fasciculatus_F_contig15858.4018.1 vs. uniprot
Match: A0A812UXQ5_SYMMI (MORC4 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UXQ5_SYMMI) HSP 1 Score: 79.0 bits (193), Expect = 3.380e-13 Identity = 57/197 (28.93%), Postives = 85/197 (43.15%), Query Frame = 2
Query: 182 PKADQWVMCDYAHCGKWRRVPPGVSVQGI-DKWYCPMGTWNPSAS--CEQPEDSTSIPTPATN---GTAGGRSFVVRGGAGSRGGGXGASVRGRRIGSRARATSESADATEERSWRRDPGSGSGLERRESDAGSRGXXXXXXXSKKDDVLWVQCDRCLRWRKLALGMRLENLPDKWYCKMNTWSPAN-HCSYPDEYD 751
P QWV CD CGKWR +P V + ++W+C + W+ + + E+ P PA G GG +V G SV+GR+ R + SAD +A + ++V WVQC++C +WRK+ + ++LPD WYC MNTW+P CS +E +
Sbjct: 244 PLPKQWVCCDT--CGKWRSIPGEVDTSNLPEQWHCSLNEWDEGHNDCSHEEEEYVEEPEPAVVDPVGAKGGDDEIV-----------GRSVQGRKRRGRIPYGATSAD---------------------DEADNDVQQMSIAVPVVENVTWVQCNKCSKWRKVPGRINQKDLPDVWYCVMNTWAPEYARCSAKEEVE 406
BLAST of mRNA_E-fasciculatus_F_contig15858.4018.1 vs. uniprot
Match: A0A7S3XPV4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPV4_HETAK) HSP 1 Score: 65.1 bits (157), Expect = 6.870e-10 Identity = 23/45 (51.11%), Postives = 33/45 (73.33%), Query Frame = 2
Query: 614 WVQCDRCLRWRKLALGMRLENLPDKWYCKMNTWSPANH-CSYPDE 745
WVQCD C +WR++ + LE LP+KWYC+MNTW+P C+ P++
Sbjct: 50 WVQCDGCAKWRRVPNAVDLERLPEKWYCRMNTWAPERAACAVPED 94
BLAST of mRNA_E-fasciculatus_F_contig15858.4018.1 vs. uniprot
Match: UPI001CC670F1 (MORC family CW-type zinc finger protein 3 isoform X1 n=2 Tax=Dromiciops gliroides TaxID=33562 RepID=UPI001CC670F1) HSP 1 Score: 68.2 bits (165), Expect = 2.100e-9 Identity = 26/50 (52.00%), Postives = 34/50 (68.00%), Query Frame = 2
Query: 596 KKDDVLWVQCDRCLRWRKLALGMRLENLPDKWYCKMNTWSPANHCSYPDE 745
K+ D WVQCD CL+WRKL G+ ++NLP+KWYC +N CS P+E
Sbjct: 406 KQPDQTWVQCDSCLKWRKLPDGIIIDNLPEKWYCSLNPDPQFRSCSVPEE 455
BLAST of mRNA_E-fasciculatus_F_contig15858.4018.1 vs. uniprot
Match: Q6DDL5_XENLA (MORC family CW-type zinc finger 3, gene 2 L homeolog n=2 Tax=Xenopus laevis TaxID=8355 RepID=Q6DDL5_XENLA) HSP 1 Score: 67.4 bits (163), Expect = 3.800e-9 Identity = 32/52 (61.54%), Postives = 34/52 (65.38%), Query Frame = 2
Query: 596 KKDDVLWVQCDRCLRWRKL--ALGMRLENLPDKWYCKMNTWSPANHCSYPDE 745
KK D LWVQCD CLRWRKL ALG LP+KWYC MNT CS P+E
Sbjct: 403 KKPDQLWVQCDSCLRWRKLPDALG----KLPEKWYCSMNTDPQFRDCSVPEE 450
BLAST of mRNA_E-fasciculatus_F_contig15858.4018.1 vs. uniprot
Match: A0A7K4ZFV8_9AVES (MORC3 protein (Fragment) n=2 Tax=Centropus TaxID=57401 RepID=A0A7K4ZFV8_9AVES) HSP 1 Score: 67.0 bits (162), Expect = 5.070e-9 Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 2
Query: 596 KKDDVLWVQCDRCLRWRKLALGMRLENLPDKWYCKMNTWSPANHCSYPDE 745
K+ D LWVQCD CL+WRKL G +ENLP+KWYC +N +C+ P+E
Sbjct: 370 KRPDQLWVQCDTCLKWRKLPDG--IENLPEKWYCSLNPDPQFRNCTVPEE 417
BLAST of mRNA_E-fasciculatus_F_contig15858.4018.1 vs. uniprot
Match: UPI0011E9DB6D (MORC family CW-type zinc finger protein 3 n=1 Tax=Archocentrus centrarchus TaxID=63155 RepID=UPI0011E9DB6D) HSP 1 Score: 66.2 bits (160), Expect = 9.650e-9 Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 2
Query: 596 KKDDVLWVQCDRCLRWRKLALGMRLENLPDKWYCKMNTWSPANHCSYPDE 745
K+ D WVQCD+CLRWRKL G + LPDKW+C+MN C P+E
Sbjct: 412 KRPDQNWVQCDKCLRWRKLPDGYDVNKLPDKWFCQMNPDPQFRSCQVPEE 461
BLAST of mRNA_E-fasciculatus_F_contig15858.4018.1 vs. uniprot
Match: A0A7S2DNR0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNR0_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 1.400e-8 Identity = 23/44 (52.27%), Postives = 32/44 (72.73%), Query Frame = 2
Query: 593 SKKDDVLWVQCDRCLRWRKLALGMRLENLPDKWYCKMNTWSPAN 724
SKK+ +WVQCD C +WRK+ + LPDKW+C+MNTW P++
Sbjct: 2 SKKNRGVWVQCDSCSKWRKIPDSVDASRLPDKWFCRMNTWDPSH 45
BLAST of mRNA_E-fasciculatus_F_contig15858.4018.1 vs. uniprot
Match: A0A7L0Q7L0_9AVES (MORC3 protein (Fragment) n=1 Tax=Mesembrinibis cayennensis TaxID=1118748 RepID=A0A7L0Q7L0_9AVES) HSP 1 Score: 65.1 bits (157), Expect = 2.280e-8 Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 2
Query: 596 KKDDVLWVQCDRCLRWRKLALGMRLENLPDKWYCKMNTWSPANHCSYPDE 745
K+ D WVQCD CL+WRKL G +E+LPDKWYC +N +CS P+E
Sbjct: 397 KQPDQTWVQCDACLKWRKLPDG--IEHLPDKWYCTLNPDPQFRNCSVPEE 444 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15858.4018.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15858.4018.1 >prot_E-fasciculatus_F_contig15858.4018.1 ID=prot_E-fasciculatus_F_contig15858.4018.1|Name=mRNA_E-fasciculatus_F_contig15858.4018.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=249bp MGRDAVASLLRAAESSRMEVGPSPEVRSGGRGGAGAAAAGMHAAARSDGSback to top mRNA from alignment at E-fasciculatus_F_contig15858:85..2484- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15858.4018.1 ID=mRNA_E-fasciculatus_F_contig15858.4018.1|Name=mRNA_E-fasciculatus_F_contig15858.4018.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2400bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15858:85..2484- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15858:85..2484- >mRNA_E-fasciculatus_F_contig15858.4018.1 ID=mRNA_E-fasciculatus_F_contig15858.4018.1|Name=mRNA_E-fasciculatus_F_contig15858.4018.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1494bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15858:85..2484- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |