mRNA_E-fasciculatus_F_contig1585.4014.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-fasciculatus_F_contig1585.4014.1
Unique Name	mRNA_E-fasciculatus_F_contig1585.4014.1
Type	mRNA
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)

Homology

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BLAST of mRNA_E-fasciculatus_F_contig1585.4014.1 vs. uniprot
Match: D7FH79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH79_ECTSI)

HSP 1 Score: 365 bits (936), Expect = 1.550e-117
Identity = 178/286 (62.24%), Postives = 211/286 (73.78%), Query Frame = 2

Query:  116 MLLLGVANGQSFDPSYLGCFSDPAENRVFEWGSSTSAMTAEACSALCSQSDFYGTQYSTECWCGDNVGYAANGPGVCDMACSGNSDEICGGSYALSIYSN--DPLYIGCYVVPRDNRDFTVLGGVQDDMTPEVCKDLCSEHRYYSVSYSDMCFCADSIENILDLNVEGTCDMTCAGDASQICGGYFSNNIYEIDVDTEDDPSYLGCFSDPADGRIFEREASSDDMTAEACATLCTDSAYYGTQYSQECWCGDNADYDANGFGVCDMSCSGHSDEICGGSYAMSVYQ 967
            MLLLGVA GQS DPSYLGCFSDPA++RVF+   S SAMTA  CS LC+ S FYGTQYS+ECWCGDNV Y ANG GVCDMACSG+S + CGG YA+S+Y N  D  Y+GCY  P D+R F ++    DDMT E+C   C  ++YY   YS  C+C D+ +   D N  G CDM C+GDAS+ICGG+++ ++YE +VD  D PSYLGC+SDPAD RIFE  A+SDDMT+E C   C    YYGTQYS +CWCGDNADYDANG G CDM CSG S EICGG Y+MSVY+
Sbjct:    1 MLLLGVAVGQSDDPSYLGCFSDPADSRVFDTQYSDSAMTAAVCSVLCASSAFYGTQYSSECWCGDNVDYDANGEGVCDMACSGDSSQTCGGFYAMSVYENPDDSGYLGCYSDPADSRIFELVA-TSDDMTSEICLGNCGAYQYYGTQYSTQCWCGDNAD--YDANGAGECDMACSGDASEICGGFYTMSVYE-NVDPVD-PSYLGCYSDPADSRIFELVATSDDMTSEICLGNCGAYQYYGTQYSTQCWCGDNADYDANGAGECDMDCSGDSSEICGGFYSMSVYE 281

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BLAST of mRNA_E-fasciculatus_F_contig1585.4014.1 vs. uniprot
Match: A0A6H5K060_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K060_9PHAE)

HSP 1 Score: 302 bits (774), Expect = 2.170e-92
Identity = 149/275 (54.18%), Postives = 187/275 (68.00%), Query Frame = 2

Query:  152 DPSYLGCFSDPAENRVFEWGSSTSAMTAEACSALCSQSDFYGTQYSTECWCGDNVGYAANGPGVCDMACSGNSDEICGGSYALSIYSN--DPLYIGCYVVPRDNRDFTVLGGVQDDMTPEVCKDLCSEHRYYSVSYSDMCFCADSIENILDLNVEGTCDMTCAGDASQICGGYFSNNIYEI-DVDTEDDPSYLGCFSDPADGRIFEREASSDDMTAEACATLCTDSAYYGTQYSQECWCGDNADYDANGFGVCDMSCSGHSDEICGGSYAMSVYQ 967
            D  YLGC+SDPA++R+F+  ++   MT+E C   C    +YGTQYST+CWCGDN  Y ANG G CDMACSG++ EICGG YA+S+Y N  D  Y+GCY  P D+R F ++    DDMT E                   C+C D+ +   D N EG CDM C+GDAS+ICGG+++ ++YE  DVD  D PSYLGC++DPAD RIF+  A++DDMT+E C   C    YYGTQYS +CWCGDNADYDANG G CDM+CSG S EICGG Y+MSVY+
Sbjct:   73 DSGYLGCYSDPADSRIFDLVATADDMTSEICLGNCGAYQYYGTQYSTQCWCGDNADYDANGAGECDMACSGDASEICGGFYAMSVYENPDDSGYLGCYSDPADSRIFDLVA-TADDMTSE-------------------CWCGDNAD--YDANGEGVCDMACSGDASEICGGFYAMSVYENPDVDPVD-PSYLGCYADPADSRIFDLVATADDMTSENCLGNCGAYQYYGTQYSTQCWCGDNADYDANGAGECDMACSGDSSEICGGFYSMSVYE 324

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1585.4014.1 vs. uniprot
Match: A0A6H5K646_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K646_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 4.680e-89
Identity = 157/324 (48.46%), Postives = 188/324 (58.02%), Query Frame = 2

Query:  161 YLGCFSDPAENRVFEWGSSTSAMTAEACSALCSQSDFYGTQYSTECWCG-DNVGYAANGPGVCDMACSGNSDEICGGSYALSIY--------SNDPLYIGCYVVPRDNRDFTVLGGVQDDMTPEVCKDLCSEHRYYSVSYSD-------------------------------------------MCFCADSIENILDLNVEGTCDMTCAGDASQICGGYFSNNIYEIDVDT--EDDPSYLGCFSDPADGRIFEREASSDDMTAEACATLCTDSAYYGTQYSQECWCG-DNADYDANGFGVCDMSCSGHSDEICGGSYAMSVYQ 967
            +LGCFSDPA++RVF    S+++MTAE CS  C+ S +YGTQYSTECWCG +   Y ANG GVCDM C G++ E CGG YA+SIY        S+DP Y+GCY  P D+R F       D MT EVC + C+   YY   YS                                             C+C     +  D N  G CDM C GDA + CGG+++ +IYE D D    DDPSYLGC+SDPAD R+F +  SS  MTAE C+  C  SAYYGTQYS ECWCG + ADYDANG GVCDM C G +DEICGG YAMSVY+
Sbjct:   98 FLGCFSDPADSRVFVQEISSASMTAEVCSEACAGSAYYGTQYSTECWCGAEGADYDANGAGVCDMPCGGDAGETCGGFYAMSIYEHDVDGGESDDPSYLGCYSDPADSRVFEQKIS-SDSMTAEVCSEACAGSAYYGTQYSTEHTVHASHVSTKTPSVVHTPPTLPDIVPLLCGNATHYCFAFYKQCWCGAEGADY-DANGAGVCDMPCGGDAGETCGGFYAMSIYENDADDGESDDPSYLGCYSDPADSRVFVQGVSSAAMTAEICSAACAGSAYYGTQYSVECWCGAEGADYDANGAGVCDMPCGGDADEICGGFYAMSVYE 419

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BLAST of mRNA_E-fasciculatus_F_contig1585.4014.1 vs. uniprot
Match: A0A6H5KAS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS7_9PHAE)

HSP 1 Score: 262 bits (669), Expect = 6.520e-80
Identity = 142/289 (49.13%), Postives = 175/289 (60.55%), Query Frame = 2

Query:  152 DPSYLGCFSDPAENRVFEWGSSTSAMTAEACSALCSQSDFYGTQYSTECWCGD-NVGYAANGPG-VCDMACSGNSDEICGGSYALSIYSN------DPLYIGCYVVPRDNRDFTVLGGVQDDMTPEVCKDLCSEHRYYSVSYSDMCFCADSIENILDLNVEGTCDMTCAGDASQICGGYFSNNIYEIDVDTEDDPSYLGCFSDPADGRIFEREASSDDMTAEA-------CATLCTDSAYYGTQYSQECWCGDNADYDANGFGVCDMSCSGHSDEICGGSYAMSVYQTI 973
            D  YLGC+  P ++R+F W ++TS    +AC                  WCGD N  Y ANG    C M C+G++ E CGGSY++S+Y N      DP Y GCY  P  NR F V     D+MT EVC   C E  +Y   YS  C+C D I     +N  G CDM C+G++ + CGG +S ++Y        DP+YLGCFSDPADGR+F  E+S+  MTAEA       CA+ C+ SAYYGTQYSQECWCGDNADY ANGFGVCDM C+G+SDE+CGG Y MSVYQ I
Sbjct:   11 DTDYLGCYYIPTDDRIF-WLAATSDDMTKAC------------------WCGDENADYDANGASNECVMPCAGDASETCGGSYSMSVYQNEVEIPVDPAYRGCYSDPGTNRVF-VQDDSSDEMTAEVCAAQCDESAFYGTQYSRECWCGD-INAQYSVNGVGVCDMPCSGNSEESCGGSYSMDVYA------QDPAYLGCFSDPADGRMFVWESSNTAMTAEASRRGRQACASRCSGSAYYGTQYSQECWCGDNADYAANGFGVCDMPCTGNSDEMCGGPYTMSVYQAI 272

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BLAST of mRNA_E-fasciculatus_F_contig1585.4014.1 vs. uniprot
Match: A0A6H5JVT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT8_9PHAE)

HSP 1 Score: 238 bits (607), Expect = 2.190e-69
Identity = 121/228 (53.07%), Postives = 145/228 (63.60%), Query Frame = 2

Query:  296 CWCGDNVGYAANGPGVCDMACSGNSDEICGGSYALSIYSNDPLYIGCYVVP--RDNRDFTVLGGVQDDMTPEVCKDLCSEHRYYSVSYSDMCFCADSIENILDLNVEGTCDMTCAGDAS-QICGGYFSNNIYEID-VDTEDDPSYLGCFSDPADGRIFEREASSDDMTAEACATLCTDSAYYGTQYSQECWCGDNADYDANGFGVCDMSCSGHSDEICGGSYAMSVYQ 967
            CWCGDNVGYA NGPGVCDM C+GN+DE+CGG YALSIYSNDP Y+GC+  P   + R F+    V DDMT  VC DLC+ +  Y   Y   C+C D   +  D N    CD  CAG    + CGG+ + +I   D +   ++ SY+GCFSDPAD RIF   ASSDDMTAE                   CWCG+NA+YD NG GVCDM+CSG S E+CGGSYAMSVY+
Sbjct:   11 CWCGDNVGYAENGPGVCDMPCTGNTDEVCGGQYALSIYSNDPNYLGCWSDPYTAETRLFSTRIDVSDDMTTAVCDDLCAIYPLYGTQYGTECWCDDGTSDY-DQNGPAVCDYECAGSTDGEFCGGFDAISIRSHDAIVIGNNSSYVGCFSDPADNRIFALGASSDDMTAE-------------------CWCGNNAEYDVNGVGVCDMACSGDSREVCGGSYAMSVYE 218

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1585.4014.1 vs. uniprot
Match: D7G4P0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P0_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 6.270e-67
Identity = 116/230 (50.43%), Postives = 145/230 (63.04%), Query Frame = 2

Query:  227 MTAEACSALCSQSDFYGTQYSTECWCGDNVG-YAANGPGVCDMACSGNSD-EICGGSYALSIY-----SNDPLYIGCYVVPRDNRDFTVLGGVQDDMTPEVCKDLCSEHRYYSVSYSDMCFCADSIENILDLN-VEGTCDMTCAGDASQICGGYFSNNIYEIDVDTEDDPSYLGCFSDPADGRIFEREASSDDMTAEACATLCTDSAYYGTQYSQECWCGD-NADYDANG 889
            MT   C  LC+   +YGTQY TECWC +    YA NG  VCD  C+G++D E CGG  A+SI      +N   Y+GC+  P DNR F ++    DDMT EVC   CS + YY   YS  C+C D  E   D N     C M CAGDAS+ICGG +S ++Y+ DV+   DP+Y GC+SDP   R+F ++ASSD+MTA+ CAT C DSA+YGTQYS +CWCGD NA Y  NG
Sbjct:    1 MTTAVCEGLCANYAYYGTQYGTECWCDEGTADYAQNGLAVCDYECAGSTDGEFCGGFDAMSIRQHEVDTNPDNYLGCFSDPADNRIFELVTS-SDDMTEEVCSGHCSAYPYYGTQYSTECWCGDG-ETAYDTNGASEECVMPCAGDASEICGGPYSMSVYQNDVEIPVDPAYRGCYSDPGTNRVFVQDASSDEMTADQCATQCADSAFYGTQYSSQCWCGDINAPYSVNG 228

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BLAST of mRNA_E-fasciculatus_F_contig1585.4014.1 vs. uniprot
Match: A0A6H5KQV8_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV8_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 3.060e-65
Identity = 121/236 (51.27%), Postives = 143/236 (60.59%), Query Frame = 2

Query:  296 CWCG-DNVGYAANGPGVCDMACSGNSDEICGGSYALSIY--------SNDPLYIGCYVVPRDNRDFTVLGGVQDDMTPEVCKDLCSEHRYYSVSYSDMCFCADSIENILDLNVEGTCDMTCAGDASQICGGYFSNNIYEIDVDT--EDDPSYLGCFSDPADGRIFEREASSDDMTAEACATLCTDSAYYGTQYSQECWCG-DNADYDANGFGVCDMSCSGHSDEICGGSYAMSVYQ 967
            CWCG +   Y ANG GVCDM C G++ E CGG YA+SIY        S+DP Y+GCY  P D+R F       D MT EVC + C+   YY   YS             D + EG           +ICGG+++ +IYE D D    DDPSYLGC+SDPAD R+F +  SS  MTAE C+  C  SAYYGTQYS ECWCG + ADYDANG GVCDM C G +DEICGG YAMSVY+
Sbjct:   25 CWCGAEGADYDANGAGVCDMPCGGDAGETCGGFYAMSIYEHDVDGGESDDPSYLGCYSDPADSRVFEQKIS-SDSMTAEVCSEACAGSAYYGTQYSTE-VSGFRYNTPSDNHEEGH---------DEICGGFYAMSIYENDADDGESDDPSYLGCYSDPADSRVFVQGVSSAAMTAEICSAACAGSAYYGTQYSVECWCGAEGADYDANGAGVCDMPCGGDADEICGGFYAMSVYE 249

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1585.4014.1 vs. uniprot
Match: A0A6H5KL84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL84_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 5.710e-58
Identity = 97/185 (52.43%), Postives = 121/185 (65.41%), Query Frame = 2

Query:  413 NDPLYIGCYVVPRDNRDFTVLGGVQDDMTPEVCKDLCSEHRYYSVSYSDMCFCADSIENILDLNVEGTCDMTCAGDASQICGGYFSNNIYEIDVDTEDDPSYLGCFSDPADGRIFEREASSDDMTAEACATLCTDSAYYGTQYSQECWCGD-NADYDANGFGVCDMSCSGHSDEICGGSYAMSVY 964
            ND   +GC+  P DNR F  L    DDMT  VC D CS + YY   YS  C+C D   +         C M CAGDAS+ CGG +S ++Y+ +V+   DP+Y GC+SDP   R+F ++ SSD+MTAE CA  C +SA+YGTQYS+ECWCGD NA Y  NG GVCDM CSG+S+E CGGSY+M VY
Sbjct:   10 NDTDSLGCFYDPADNRIFW-LATSSDDMTKAVCSDHCSAYPYYGTQYSVECWCGDENADYDANGASNECVMPCAGDASETCGGSYSMSVYQNEVEIPVDPAYRGCYSDPGTNRVFVQDDSSDEMTAEVCAAQCDESAFYGTQYSRECWCGDINAQYSVNGVGVCDMPCSGNSEESCGGSYSMDVY 193

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BLAST of mRNA_E-fasciculatus_F_contig1585.4014.1 vs. uniprot
Match: A0A6H5KQN6_9PHAE (WSC domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQN6_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 1.230e-56
Identity = 106/177 (59.89%), Postives = 113/177 (63.84%), Query Frame = 2

Query:   89 MSLLSTSLPMLLLGVANGQSFDPSYLGCFSDPAENRVFEWGSSTSAMTAEACSALCSQSDFYGTQYSTE-----------------------------------CWCGDNVGYAANGPGVCDMACSGNSDEICGGSYALSIYSNDPLYIGCYVVPR--DNRDFTVLGGVQDDMTPEV 508
            M LL  +LP LLLGVA GQS DPSYLGCFSDPAENRVFEW SSTSAMTA+ CS LCS SDFYGTQYSTE                                   CWCGDNVGYA NGPG C M CSGNSDEICGGSYALS+YSNDP Y+GC+  P   + R F +L    DDMT  V
Sbjct:    1 MHLLPLALPTLLLGVAVGQSDDPSYLGCFSDPAENRVFEWQSSTSAMTADVCSELCSGSDFYGTQYSTERQTSHAALATTTLLHTFDATTKIIPNVRRSFQFNKCWCGDNVGYAINGPGDCAMPCSGNSDEICGGSYALSVYSNDPDYLGCWSDPHSAETRLFPILIDTSDDMTTAV 177

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BLAST of mRNA_E-fasciculatus_F_contig1585.4014.1 vs. uniprot
Match: B2ACF9_PODAN (Podospora anserina S mat+ genomic DNA chromosome 3, supercontig 1 n=2 Tax=Podospora TaxID=5144 RepID=B2ACF9_PODAN)

HSP 1 Score: 174 bits (440), Expect = 6.080e-43
Identity = 122/333 (36.64%), Postives = 165/333 (49.55%), Query Frame = 2

Query:   65 RARNLEVKMSLLSTSLPMLLLGVANGQSFD-PSY--LGCFSDPAENRVFEWGSSTSAMTAEACSALCSQSDFYGTQYSTECWCGDNVGYAANGPGVCDMACSGNSDEICGGSYALSIYSND----------PL------YIGCYVVPRDNRDFTVLGGV---QDDMTPEVCKDLCSE--HRYYSVSYSDMCFCADSIENILDLNVEGTCDMTCAGDASQICGGYFSNNIYE--------IDVDTEDDPSYLGCFSDPADGRIFER-EASSDDMTAEACATLCTDSAYYGTQYSQECWCGDNADYDANGFGVCDMSCSGHSDEICGGSYAMSVY 964
            + R L +    LSTS   L  G+ + Q  D P Y  LGCF D     +     ST  MTAE C+A C   D++GTQ+S+EC+CG N    A     C+M CSGN DE CG    L++Y  D          P+      Y GCY    DN    VLGG+   Q DMT E C   C+   + ++ V Y   CFC  S++       EG C MTC G+ SQ CGG    NIYE         ++++  D  Y  C++D  D R  +  +  +DDMT E CA  C++ +Y+G +YS+EC+CG+     A     C M C G   + CGG   M++Y
Sbjct:    7 KMRLLSLGALFLSTS-SALPNGLYSRQVDDAPEYTVLGCFVDTGSRVLPSKVISTHDMTAEKCAANCRGYDYFGTQWSSECYCGSNKPTDAAPASECNMPCSGNPDETCGAGMRLNVYEFDRACDSDTEEPPVVISGFEYKGCYT---DNVPQRVLGGITVAQHDMTLEKCAATCTAGGYAFFGVEYGTECFCGTSLDAASTKVSEGECSMTCMGNHSQQCGGPNRLNIYEKPNPVGAGSNLESVGDFHYASCWTDKVDDRSLKAVDWRTDDMTVEKCADRCSEFSYFGLEYSRECYCGNELTGQAAPEKDCAMLCVGAPGQWCGGPDRMNLY 335

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig1585.4014.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig1585.4014.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FH79_ECTSI	1.550e-117	62.24	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K060_9PHAE	2.170e-92	54.18	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K646_9PHAE	4.680e-89	48.46	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KAS7_9PHAE	6.520e-80	49.13	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JVT8_9PHAE	2.190e-69	53.07	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G4P0_ECTSI	6.270e-67	50.43	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KQV8_9PHAE	3.060e-65	51.27	WSC domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5KL84_9PHAE	5.710e-58	52.43	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KQN6_9PHAE	1.230e-56	59.89	WSC domain-containing protein n=2 Tax=Ectocarpus s...	[more]
B2ACF9_PODAN	6.080e-43	36.64	Podospora anserina S mat+ genomic DNA chromosome 3...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig1585	contig	E-fasciculatus_F_contig1585:3591..10473 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	365.9
Seed ortholog evalue	1.7e-98
Seed eggNOG ortholog	2880.D7FH79
KEGG rclass	RC00467
KEGG ko	ko:K15920
KEGG Reaction	R01433
KEGG Pathway	ko00520,ko01100,map00520,map01100
EggNOG free text desc.	protein xylosyltransferase activity
EggNOG OGs	KOG4157@1,KOG4157@2759
EC	3.2.1.37
COG Functional cat.	U
CAZy	GH3
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko01000
Hectar predicted targeting category	signal peptide
Ec32 ortholog description	hypothetical protein
Ec32 ortholog	Ec-22_001535.1
Exons	9
Model size	1785
Cds size	888
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928052.8946009-UTR-E-fasciculatus_F_contig1585:3590..3662	1622928052.8946009-UTR-E-fasciculatus_F_contig1585:3590..3662	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1585 3591..3662 +
1695995804.4486518-UTR-E-fasciculatus_F_contig1585:3590..3662	1695995804.4486518-UTR-E-fasciculatus_F_contig1585:3590..3662	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1585 3591..3662 +
1622928052.9108799-UTR-E-fasciculatus_F_contig1585:4433..4449	1622928052.9108799-UTR-E-fasciculatus_F_contig1585:4433..4449	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1585 4434..4449 +
1695995804.4598465-UTR-E-fasciculatus_F_contig1585:4433..4449	1695995804.4598465-UTR-E-fasciculatus_F_contig1585:4433..4449	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1585 4434..4449 +
1622928053.055204-UTR-E-fasciculatus_F_contig1585:9664..10473	1622928053.055204-UTR-E-fasciculatus_F_contig1585:9664..10473	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1585 9665..10473 +
1695995804.553-UTR-E-fasciculatus_F_contig1585:9664..10473	1695995804.553-UTR-E-fasciculatus_F_contig1585:9664..10473	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1585 9665..10473 +

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig1585.4014.1	prot_E-fasciculatus_F_contig1585.4014.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	polypeptide	E-fasciculatus_F_contig1585 4450..9664 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-fasciculatus_F_contig1585:3591..10473+
coding sequence from alignment at E-fasciculatus_F_contig1585:3591..10473+

protein sequence of mRNA_E-fasciculatus_F_contig1585.4014.1

>prot_E-fasciculatus_F_contig1585.4014.1 ID=prot_E-fasciculatus_F_contig1585.4014.1|Name=mRNA_E-fasciculatus_F_contig1585.4014.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=296bp
MSLLSTSLPMLLLGVANGQSFDPSYLGCFSDPAENRVFEWGSSTSAMTAE
ACSALCSQSDFYGTQYSTECWCGDNVGYAANGPGVCDMACSGNSDEICGG
SYALSIYSNDPLYIGCYVVPRDNRDFTVLGGVQDDMTPEVCKDLCSEHRY
YSVSYSDMCFCADSIENILDLNVEGTCDMTCAGDASQICGGYFSNNIYEI
DVDTEDDPSYLGCFSDPADGRIFEREASSDDMTAEACATLCTDSAYYGTQ
YSQECWCGDNADYDANGFGVCDMSCSGHSDEICGGSYAMSVYQTI*

mRNA from alignment at E-fasciculatus_F_contig1585:3591..10473+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-fasciculatus_F_contig1585.4014.1 ID=mRNA_E-fasciculatus_F_contig1585.4014.1|Name=mRNA_E-fasciculatus_F_contig1585.4014.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6883bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1585:3591..10473+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTCGCCCTTTCTGCCTTCTGCACTGAGAACTGCACTGAGCACTTCCGAGC
AGATCAGCCCTCCAAGAGCTCGGTAAGCTGTATCTAAGTGTGATTGATTC
TTCGACGAGTTGAGCGCGCCTACTGGTAGCCAGCACTCTTCCTTCTGTGA
AACGAGTCGACCCGATCTGTTGCAGAGAATAATTGAAGTTGCTTGCACAG
CAGGCATCGTCTCACACGGCGGCTGTAATAGACTATGTTGTGCTTGTGAT
TACCGCTTCGCCCAATGCACCAGAGCTACACTTGCACTGCTACGACACTG
CTGTAGGTAGCTCTTGGAACAAGCATATATATGTATGTCGCCGTCACTTT
GCTCGGGTTCACGGCGATGACAGCTATCATGACCTTGCCCATACACACCT
GTAGACAATTTTTGCCCGAAGTGAGTTCTGACTGATCCGTTGGGAACAAA
GGCAACGGCCGTGTCGGAGATTTAGGCTAGTCTACAGTTACACGAGACAA
ACCTATTGCTGTACCCGCTCATCTACCACGAGTCCTCTGGTCAGCCCTTC
TCCCTGGCTGTCTTTTGCCCTGCGTCGTAGGAGCCTACCTCGAGCGGACA
CTTCAATGTAGAGAGCGCCGTTCTCGTGGTACGCCAACGATACCGAGCAC
GGGGTAATTGACTGATGCAGCCGTACGTGTAGTCTACGTACGAACACGTT
TGTGTACAGGAAACAGATCATCTAGACGAGACAGCGAATCGACAACAATA
AATAATTTTACTGTAGGGTAGCCCCTTTTCAACCGTCTCTCGAAGGCCTC
ACGTACGATGATCCTTTTCCTGTCCATGCATCACCTTCTTCAGCAATCTC
GAGGTCAAGATGAGTCTCCTTTCGACATCGCTACCGATGCTCCTTCTCGG
GGTCGCCAATGGTGAGACACGTAGATATGTACTAAAATATCGGACAATCA
ATCGTCCCCAACATCTGCAACAGAAGGGCCAATATATGTCGGCGAGTGCG
CCATGAGTACTTTCCACTTTCTGAAGCCATACAGGTGTCCGCAAGGTCGA
GGTTACGGGGCCCAGAGTTTCGACGACCGTGTTGAACCAGTGTCGTGCAG
ACGACGCCATATATAAGGGTGGAGCAGTCAACCTTCAGATGCCTTGGTAA
ACGGATCACCAAGCCGTGCATGCTCAGACATTGTCTCCCCAAAACCAAAA
AATAAATAGTACTCCCCAAACCCTAAAAAACAAAAACAATTAACTAGTAA
AACACACCCATATACATTAGTAACAACACTGCAGAGCCTGTATGAGCTTG
AGAATATCGAAAAACGCTTAACGGATCAAGGTTCCGGAACGACAGTCGAT
ACGGGAGTCACATGTAGTCTAAAGGGTGTGCTCTCATGAGCTCACATGGA
GCAATTTCAGAGTGTTTAGGATGCGCGTGAGATCCCCGGACATCAAAAAC
ATGACAAGTACCTCAACGAGCATCGGCCGGAGTAGCAGAGTATTAGCAGA
AAGGCAGGATTCTCACCGCTCGGGGGAGCTGCCGGGGCTGCTGAGGAAGC
TGGATCGTTTCTTACCCGCAGCCATGACTCCAGATCGACGAGTGCACCCG
ACATGTGGTTCAGAGTCCAACCTGAAATGTAACGAGGTGGTCGCTGTGGT
CCCTCGTCTACCGCACCCTTTAACAAAGCAAAGTTCAGCCCAAGGCCCGG
GGCGCATCCTCCTACTGCAAATCATGTGCGAATGGGCTAGAGTGGAAGAC
CCCCATCTCCCTGCGGACGAATCCCCGCCCCCGTCGCTGAGTACTGCCCG
AGAATAAATATTACGAACAGCGCCTGCCTTGTTTGTACGTTGAACAATTC
GAGACCAAGCTTCTTCTCAGTTTGCGAGACCCCCGTTGTCCCTCTGCTGC
CGGAGCAGGTCAGTCCTTTGACCCATCATACCTCGGGTGCTTCTCGGACC
CTGCTGAGAACCGCGTCTTCGAGTGGGGGTCTTCTACCTCCGCCATGACT
GCAGAGGTGCGTGACCCATCGGTTGGCGGAGCGTGTGGATCTGTATGTGT
GTGTTTTAGGTGGTTGCATACCGTTGTCATCATAGATTTCTGCGAGACGG
AATGTCTCCTTACCTGATGCCTATGGCAATTGTTGTTGCTGATGTCGCAA
CCGGATATCGCACAGGAATTGTTGCAGCCTTCCAAATCGTAGTGTCGTAT
TGGTATTTCTGTTTTGCGGATTTGCCTCCCCTCCCCTGCCCCCCACGAAG
CGGATACTGGATATTGGACCAAATTTCGCTCAAACGCACGACCCTCCGAC
CACAGGCCTGCTCCGCGCTCTGCTCCCAGTCGGACTTCTATGGGACCCAG
TACTCGACAGAGGTAAGGTCTCGGAGATAGCTTTCAACACCATGGGATCA
GGTGCCGATCAACAGTCGGGTGACCCGCGGCATAATCATATTTGAAACGT
GTGGACTGGGCCATTGGGTGTAGGGTGGGCTTTGCAGGACTGCGTGCGTC
ATCTTGCCTCGGTTCGGGGCGCGTTGTGTCTCCTCTGCACCTGCCTGCCA
ACAACGAAAGATGGTGTAAACCGTTGTGCGTTGGCTGGCCGAGCCCATCG
ATTTTGGTATTTTAGTCCCCGCTAGGTCGTTTGGCTGTGGTCCGCTCCTT
GGCAAACCAACGTCCAGTTTGCGTCATGCTGAGATGCGCGATGACCACCG
GACTATCAGTCAGCGGCTGACGGCAAGTCCAGTGGTCATCGTGCTTGTCA
ACACGTTACACAACAAGAGTGATACCCGTGTTCCTTTCTCTAGCCTAACC
ATAGCGAACGGAACGGGCGAACAAATCCACACCTGCACGACTTGAAACAG
TTGCCTCACGACCGAGGCCACGGATGAGCGCGTTTCTTCGTGAACTCAGA
TGCTGTTAGTCTAAACTCGTCTATTCTCGATCGTTGCTCGACACCCCCAC
CGCCGCCACACGCACTTCATTCCTCCGAATTTTCACATTCTCACCAACAT
GAGACCCCTGCCTTCCTCTCACGCTACCCGGTTTCCCCCCTTGGTATTCG
CCGTTTCGAAACAGTGCTGGTGTGGCGACAACGTCGGGTACGCCGCTAAC
GGCCCCGGCGTCTGCGACATGGCCTGCTCCGGCAACTCTGATGAGATCTG
TGGCGGCTCCTACGCCCTCTCGATTTATTCGAACGACCCCTTGTACATTG
GGTGCTACGTTGTCCCACGAGACAATCGCGATTTCACGGTCTTGGGGGGC
GTCCAAGACGACATGACCCCGGAGGTGAGTGAACAAGCGAAGAGCGATTG
GACATGGCGTTGGTCGACCCTGGTCTAAATTCCCGCTGGTGTCTCCATGA
TGCGTGGCCTGTTCTGTTGTGCTTGCTGACGTCGTGGAGTTGTTCGATGC
ACAGACGCATAAGGTCACAGGCTTTCACGTTGACACGCAGTCACCGCTTT
ACCCCAGACGTGTACGCTGCCCTCTGACGACAAATCTCTCGCTGCCCCCC
TTGCCCGGCTGGACGACCATTGATTCGCTTCTGTGACCGAACGACCAAAG
GTCTGCAAAGATCTCTGCTCCGAGCACAGGTACTACTCCGTGAGCTATTC
GGACATGGTAAGACCAGAGGTCGCATGTGAGGTAGTGTGTACATCGTGTG
TCGAGAAAAATGTGGTATCGGAATGGTATCTTGCCCGGATTGCAGTGGTA
TCGTTCCTGCACTCGTTTTGGTTTGTATGGCTTCGACATAATGTGAATCT
GTGAGCAGTGGGGTGTTGTTGATCGTTCTCTGGCTTCGTCAATTTGTGTA
GATGTCTTGAGTTCTGTTGGTCGCCTCTTCCTTCCTCTTGCAGCTCTAGA
TTAGGTGCCAATGAGAAGTTAATGCACCATGCATGTCGGAGTTGCGTCTT
ACGTAATGATGTCCAACGTGCTAAGGCCGCCACACAATGTGGAGTAGCCC
AGTAGATGTGATAAGAGTATCCCTCGGCCGTTCGCATCAACTGTCGTATC
GCTCCCTGGTTGTACCCGATGACTGCGTGTCCGCGTAGTAGGCTTTGCGT
CAGCTTTCGCGAGTCACAAACAGTCGTGGTTGCTGGCTAGTACGCACCAC
CCGTTCCACACGTACCAAGGCGGAATGTTCTGAATTGATGGTTCTCAGGA
AATACGCGAGTACTGTTTCTAGTTGCGCCCGAAGTCACAGGTGATCCGGT
GGATGTCCACTTCTCTCGAGACAACCCTGCCGATAACATGGTTGTTGTTT
CGCCAATTCTTGCTGTCACTCGTTTCCCTACTACGTTCGTCTACTAGCCG
CTGGCTCACGCCACGCGACCACCACCGCACGTATGTACAATAATTTGTAG
AGGGTTAGCACTAACTTTCCCCGATGCCACCACGTTACGATGACGAGCAC
CTTCTCTCTACGTCACACCCTCTCCCCTTGATGATTCTGCTGCCGCATGC
AACAGTGCTTTTGCGCTGATTCCATCGAGAATATCCTCGACCTCAACGTG
GAAGGTACCTGCGACATGACTTGCGCGGGCGACGCCTCCCAGATCTGTGG
AGGCTACTTCAGCAACAATATCTACGAGATCGACGTGGACACCGAGGACG
ACCCCTCGTACCTTGGGTGCTTCTCGGACCCCGCCGACGGCCGTATTTTC
GAGAGGGAGGCTTCCTCTGACGATATGACTGCAGAGGTGAGCAATTTGCT
GAACCAATAGCTGTTGGGTTGGATTTTTTCAGGATGCCGTTGTGTGCCTT
CACGTTCTTCCGAACGCATTGCAGAAGAACACATTCGCTGTCTTGTTAGT
GCGGTCGCCGAAGGTCTTGTTTGTCTGAATGTCAACGGTGACTATTTTTT
ACAGAGGAATCGCCGAATCCTCGACAAACGTTTGTATATCCAACTCGCCA
CCGACACTCCCGATTATTCCACATTTCTTTGTGTTCGCCTCTCACTGCTC
ATTCCTTTGGCTCGCCCTGACAAATGGTCGTCGGGGAACGCATATGATCA
GGCCTGCGCAACCCTCTGCACTGACTCGGCCTACTACGGCACGCAGTATT
CTCAAGAGGTAAGACCTGTGGCATAGACGTTATCGAAGTGTATTGATTGT
GCTATGCAGCATGTTGTTGTTGTTTGACAAAACGAGGTGGTTGGAAAGCG
TGATGCGGTCGTTGTGGGCGAAACTTGATCGCCGGCCGACTTTGTTTTTC
GGTCGATTTGACTTGCGACGGTTTCAAGTCATCTCCCAACCTCGTCCTCA
GACAAGTCTCATCTCTTTCTGAGACAATAGACAGTGGTTTTCTCTAGGTC
ACCCATGAGTGATGTTGTGATGTCATCAAACATGGCTTCTTGGCTTTGTC
AAGGCGTCGAGGTACCTGGTACCTAGCTGGTCTGCTCTTTCTACCGTCGT
ATGCTCTTGTGGACACCAGCGAGACTCGTGCAATACAGTTGAAGCCCGCC
AAAATAGGCTCAACGTTCGCGATATAAAACCCCGAAACATACCTCAGGCG
TGGGTCTTACACTTAATTCTATATAACGACGTGTGCTCGACGGTGGCGAC
GAAATAAGAAATTGAGCCTCGACCTCAAATGGACGTATCTTATTCGCGGG
CCGCAACTGCAAATGTATGCCAGTACTGCGCAACTCGCTGATAATCGACC
GTACACATAGGGCACGCTACGAAGTGCGACTTGACTTGATCGTCGCACGC
TCCGGAACACGCCAACGGAAAAATGTTTCCAGAGTGCGTTGTGTTCGAAA
ACGTGCATGCACATGACTTGATGTGTTTCTTCCGCACGCTCTCATGATTT
TATCGTTACTTTTGCCTAAAACCGCCGAACACCGCCTAACTCAACTGATT
CCGTGAAACATCGACCACACCACCTCGGCCACGATGAGAACCCATCCTTC
CTGTTCACCCCCCCGCCCATGTCGGCTTGATGCTGCCGTATGTTTCAGTG
CTGGTGCGGTGACAACGCCGACTACGATGCCAACGGTTTTGGCGTCTGCG
ACATGTCCTGCTCGGGCCACTCCGATGAGATCTGTGGTGGCTCGTACGCC
ATGTCGGTGTATCAAACCATCTAAACGCCCCCCGGTGCTGCCGTTTCCTC
AAGACAGACAGCCGCAACCCCTTCTCCGAAGGAAGAGGACAACACGGGCA
AGAGTTGTTTACGTAGAGTACATGGGAAAACAATGGCGAGCGCCCCCCAT
GGTCCGTAGTGTAAATTGGTGGGTACGTAGTAGAGCAGCACTGGTTAGGT
CTGCGCGATTGGCGACGTCAATAAGCTAGAGCCCCCCGCGAGCGTGTTGG
TGGTCCTCTCAGGTATGGACTAAAGCTTTGTGGTTCGTCATAGACTCTGT
TTCGCTGCTGAAAAACTATGCATACATTTTTTTCAAGTACTCCCCCGACG
AGTTTCCCTCGATGTATGTCGGGGTAACGATTGTGTCGTGAACCTCTCCG
GTCAGCCAGGGCCGCCACCCCAAACAATCCAGCGGCGACGAGCTGTAATA
ACACCAATGGCTATGATGGTGCAATACTATTGATCATTGGCTAGAGGTTG
ATCTCCAAGCTATCTCTGCAACGCATAGGGTACATCAAGAGGCTTTCATC
TTTGGAGGGGTACCGAAAGCGGCGGAGGCGGGATTGAAGAACAGATATGA
GTGTTACGGGTTCTTGCATTTGTCGTGTTCAGATGTTCCTGCATCATTCT
GCGGAATAGGGTTGAGAAGGCAGGCCTATGGAGACTAGACGGGCAGAAGA
CGTTTTCAACTAGAGCGATCGACAGGAATACATCACGGTAAGGCTGTATT
CTCTTCGGTTCTCATGTCTGGAGTGAAGACAACGTGGCTCGAGATCGTGA
TAATGACTCCGGGCAGGGTCCTCATATATTTCC

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1585:3591..10473+

>mRNA_E-fasciculatus_F_contig1585.4014.1 ID=mRNA_E-fasciculatus_F_contig1585.4014.1|Name=mRNA_E-fasciculatus_F_contig1585.4014.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1776bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1585:3591..10473+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAGTCTCCTTTCGACATCGCTACCGATGCTCCTTCTCGGGGTCGCCAA
TGATGAGTCTCCTTTCGACATCGCTACCGATGCTCCTTCTCGGGGTCGCC
AATGGTCAGTCCTTTGACCCATCATACCTCGGGTGCTTCTCGGACCCTGC
TGAGAACCGCGTCTTCGAGTGGGGGTCTTCTACCTCCGCCATGACTGCAG
AGGTCAGTCCTTTGACCCATCATACCTCGGGTGCTTCTCGGACCCTGCTG
AGAACCGCGTCTTCGAGTGGGGGTCTTCTACCTCCGCCATGACTGCAGAG
GCCTGCTCCGCGCTCTGCTCCCAGTCGGACTTCTATGGGACCCAGTACTC
GACAGAGGCCTGCTCCGCGCTCTGCTCCCAGTCGGACTTCTATGGGACCC
AGTACTCGACAGAGTGCTGGTGTGGCGACAACGTCGGGTACGCCGCTAAC
GGCCCCGGCGTCTGCGACATGGCCTGCTCCGGCAACTCTGATGAGATCTG
TGGCGGCTCCTACGCCCTCTCGATTTATTCGAACGACCCCTTGTACATTG
GGTGCTACGTTGTCCCACGAGACAATCGCGATTTCACGGTCTTGGGGGGC
GTCCAAGACGACATGACCCCGGAGTGCTGGTGTGGCGACAACGTCGGGTA
CGCCGCTAACGGCCCCGGCGTCTGCGACATGGCCTGCTCCGGCAACTCTG
ATGAGATCTGTGGCGGCTCCTACGCCCTCTCGATTTATTCGAACGACCCC
TTGTACATTGGGTGCTACGTTGTCCCACGAGACAATCGCGATTTCACGGT
CTTGGGGGGCGTCCAAGACGACATGACCCCGGAGGTCTGCAAAGATCTCT
GCTCCGAGCACAGGTACTACTCCGTGAGCTATTCGGACATGGTCTGCAAA
GATCTCTGCTCCGAGCACAGGTACTACTCCGTGAGCTATTCGGACATGTG
CTTTTGCGCTGATTCCATCGAGAATATCCTCGACCTCAACGTGGAAGGTA
CCTGCGACATGACTTGCGCGGGCGACGCCTCCCAGATCTGTGGAGGCTAC
TTCAGCAACAATATCTACGAGATCGACGTGGACACCGAGGACGACCCCTC
GTACCTTGGGTGCTTCTCGGACCCCGCCGACGGCCGTATTTTCGAGAGGG
AGGCTTCCTCTGACGATATGACTGCAGAGTGCTTTTGCGCTGATTCCATC
GAGAATATCCTCGACCTCAACGTGGAAGGTACCTGCGACATGACTTGCGC
GGGCGACGCCTCCCAGATCTGTGGAGGCTACTTCAGCAACAATATCTACG
AGATCGACGTGGACACCGAGGACGACCCCTCGTACCTTGGGTGCTTCTCG
GACCCCGCCGACGGCCGTATTTTCGAGAGGGAGGCTTCCTCTGACGATAT
GACTGCAGAGGCCTGCGCAACCCTCTGCACTGACTCGGCCTACTACGGCA
CGCAGTATTCTCAAGAGGCCTGCGCAACCCTCTGCACTGACTCGGCCTAC
TACGGCACGCAGTATTCTCAAGAGTGCTGGTGCGGTGACAACGCCGACTA
CGATGCCAACGGTTTTGGCGTCTGCGACATGTCCTGCTCGGGCCACTCCG
ATGAGATCTGTGGTGGCTCGTACGCCATGTCGGTGTATCAAACCATCTAA
TGCTGGTGCGGTGACAACGCCGACTACGATGCCAACGGTTTTGGCGTCTG
CGACATGTCCTGCTCGGGCCACTCCGATGAGATCTGTGGTGGCTCGTACG
CCATGTCGGTGTATCAAACCATCTAA