mRNA_E-fasciculatus_F_contig1584.4011.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1584.4011.1 vs. uniprot
Match: D7G885_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G885_ECTSI) HSP 1 Score: 196 bits (499), Expect = 1.770e-61 Identity = 109/160 (68.12%), Postives = 114/160 (71.25%), Query Frame = 1
Query: 43 PH--PLATVLLPSSYYSMENGAGXXXXXXXXXXXXXXXXXXNSYTSTASTGTDSLSGSKSGSQRVIEAGEVAGDYSLDWKGTFDMTLLLVTVAWLAVNIGLTLCIQPTLFRNAEFWALQVPKLACMIVVSIFAGSLCRYFCPADDTGYIMTSKNSWFKVR 516
PH PLA VL PS YYS+ENG G S TS STGT + VIEAGEVAGDYSLDWKGTFDMTL+ VTVAWLAVNIGLTL I+PTLF NAEFW LQVPKLA MIVVSI AGSLCR+FCPADDTGYIMTSKNSWFK R
Sbjct: 15 PHAPPLAAVL-PSDYYSVENGRGDGPGKGADK---------GSCTSAGSTGTK---------KSVIEAGEVAGDYSLDWKGTFDMTLVQVTVAWLAVNIGLTLWIKPTLFHNAEFWVLQVPKLAFMIVVSILAGSLCRHFCPADDTGYIMTSKNSWFKAR 155
BLAST of mRNA_E-fasciculatus_F_contig1584.4011.1 vs. uniprot
Match: D8LR81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR81_ECTSI) HSP 1 Score: 204 bits (519), Expect = 4.260e-61 Identity = 107/151 (70.86%), Postives = 112/151 (74.17%), Query Frame = 1
Query: 79 YYSMENGAGXXXXXXXXXXXXXXXXXXNSYTSTASTGTDSLSGSKSGSQRVIEAGEVAGDYSLDWKGTFDMTLLLVTVAWLAVNIGLTLCIQPTLFRNAEFWALQVPKLACMIVVSIFAGSLCRYFCPADDTGYIMTSKNSWFKVRAKRFV 531
YYS+ENG G NSYTST STGT+ + VIEAGEVAGDYSLDWKGTFDMTL+ VTVAWLAVNIGLTL IQPTLF+NAEFW LQVPKLACMI VSI AGSLCRYFCPADDTGYIMTSKNSWFKV R V
Sbjct: 86 YYSVENGRGNSPGNGAGKGLPSG----NSYTSTGSTGTN---------KSVIEAGEVAGDYSLDWKGTFDMTLVQVTVAWLAVNIGLTLWIQPTLFQNAEFWVLQVPKLACMIAVSILAGSLCRYFCPADDTGYIMTSKNSWFKVNYTRKV 223
BLAST of mRNA_E-fasciculatus_F_contig1584.4011.1 vs. uniprot
Match: A0A6H5J7Y0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Y0_9PHAE) HSP 1 Score: 145 bits (367), Expect = 4.160e-39 Identity = 67/78 (85.90%), Postives = 72/78 (92.31%), Query Frame = 1
Query: 289 MTLLLVTVAWLAVNIGLTLCIQPTLFRNAEFWALQVPKLACMIVVSIFAGSLCRYFCPADDTGYIMTSKNSWFKVRAK 522
MTL+LVTVAWLAVNIGLTL I PTLF+NA+FW LQVPKLACMIVVS+ AGSLCRYFCPADDTGYIMTSKNSWFKV +
Sbjct: 1 MTLVLVTVAWLAVNIGLTLWIHPTLFQNAQFWVLQVPKLACMIVVSVLAGSLCRYFCPADDTGYIMTSKNSWFKVNGQ 78
BLAST of mRNA_E-fasciculatus_F_contig1584.4011.1 vs. uniprot
Match: A0A6A4YJ34_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4YJ34_9STRA) HSP 1 Score: 105 bits (262), Expect = 3.980e-25 Identity = 50/99 (50.51%), Postives = 60/99 (60.61%), Query Frame = 1
Query: 229 VIEAGEVAGDYSLDWKGTFDMTLLLVTVAWLAVNIGLTLCIQPTLFRNAEFWALQVPKLACMIVVSIFAGSLCRYFCPADDTGYIMTSKNSWFKVRAKR 525
+ E GEVAGDY DW TFD+T L+ +L V I LT F N FW Q+PKL CM+VVS+ G +CR FC D GYIMT+K+S FKV R
Sbjct: 73 LCEEGEVAGDYEADWTKTFDLTFLVGMALYLVVMIVLTYIYSVEYFTNVAFWVSQLPKLVCMMVVSLLGGLICRMFCSVDSKGYIMTNKSSAFKVNYTR 171
BLAST of mRNA_E-fasciculatus_F_contig1584.4011.1 vs. uniprot
Match: A0A024TYM2_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A024TYM2_9STRA) HSP 1 Score: 108 bits (271), Expect = 5.210e-25 Identity = 52/110 (47.27%), Postives = 67/110 (60.91%), Query Frame = 1
Query: 196 SLSGSKSGSQRVIEAGEVAGDYSLDWKGTFDMTLLLVTVAWLAVNIGLTLCIQPTLFRNAEFWALQVPKLACMIVVSIFAGSLCRYFCPADDTGYIMTSKNSWFKVRAKR 525
SL+ K + E GEVAGDY W TFDM L+ + +LAV + LT P F + FW +Q+PKL CM++VS+ G +CR FC DD GYI+T+KNS FKV R
Sbjct: 69 SLTSIKKEKSSLCEEGEVAGDYEDSWVNTFDMVFLIFMLLYLAVMVVLTYYFSPEYFTDPTFWLMQLPKLGCMMLVSLIGGIICRCFCTVDDKGYIITNKNSAFKVNYTR 178
BLAST of mRNA_E-fasciculatus_F_contig1584.4011.1 vs. uniprot
Match: A0A6A4XMZ5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4XMZ5_9STRA) HSP 1 Score: 106 bits (265), Expect = 3.240e-24 Identity = 50/99 (50.51%), Postives = 61/99 (61.62%), Query Frame = 1
Query: 229 VIEAGEVAGDYSLDWKGTFDMTLLLVTVAWLAVNIGLTLCIQPTLFRNAEFWALQVPKLACMIVVSIFAGSLCRYFCPADDTGYIMTSKNSWFKVRAKR 525
+ GE AGDY DW TFD LL V +L V + LT LF N EFW Q+PK+ACM++VS+ G +CR+FC D GYIMT+KNS FKV R
Sbjct: 86 ICHEGEAAGDYDDDWTHTFDYVFLLGMVGYLVVMLVLTYFFHADLFTNPEFWLSQLPKVACMMLVSLLGGLICRHFCRVDQKGYIMTNKNSAFKVNYTR 184
BLAST of mRNA_E-fasciculatus_F_contig1584.4011.1 vs. uniprot
Match: A0A485K4N3_9STRA (Aste57867_62 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K4N3_9STRA) HSP 1 Score: 106 bits (264), Expect = 5.960e-24 Identity = 48/99 (48.48%), Postives = 63/99 (63.64%), Query Frame = 1
Query: 229 VIEAGEVAGDYSLDWKGTFDMTLLLVTVAWLAVNIGLTLCIQPTLFRNAEFWALQVPKLACMIVVSIFAGSLCRYFCPADDTGYIMTSKNSWFKVRAKR 525
+ E GEVAGDY W TFDM L+ +A+L V + LT P F + FW +Q+PKL CM++VS+ G +CR FC D+ GYI+T+KNS FKV R
Sbjct: 91 LCEEGEVAGDYEESWTSTFDMVFLIFMLAYLGVMLVLTYFYSPQYFSDINFWLMQLPKLGCMMLVSLLGGLVCRCFCNVDEKGYIITNKNSAFKVNYTR 189
BLAST of mRNA_E-fasciculatus_F_contig1584.4011.1 vs. uniprot
Match: A0A6G0WU79_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WU79_9STRA) HSP 1 Score: 105 bits (262), Expect = 9.290e-24 Identity = 53/117 (45.30%), Postives = 66/117 (56.41%), Query Frame = 1
Query: 175 TASTGTDSLSGSKSGSQRVIEAGEVAGDYSLDWKGTFDMTLLLVTVAWLAVNIGLTLCIQPTLFRNAEFWALQVPKLACMIVVSIFAGSLCRYFCPADDTGYIMTSKNSWFKVRAKR 525
T T S K+ + E G+VAGDY W TFD+T L+ V +L V + LT F N FW Q+PKL CM+VVS+ G +CR FC DD GYI+T+KNS FKV R
Sbjct: 55 TTKTQYGSTDADKNAQGVLCEEGDVAGDYEESWTKTFDLTFLIGMVVYLVVMVVLTYIYHIDYFTNTSFWLSQLPKLVCMMVVSLIGGLICRCFCTVDDKGYIITNKNSAFKVNYTR 171
BLAST of mRNA_E-fasciculatus_F_contig1584.4011.1 vs. uniprot
Match: A0A6G0X3C0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X3C0_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.280e-23 Identity = 47/99 (47.47%), Postives = 62/99 (62.63%), Query Frame = 1
Query: 229 VIEAGEVAGDYSLDWKGTFDMTLLLVTVAWLAVNIGLTLCIQPTLFRNAEFWALQVPKLACMIVVSIFAGSLCRYFCPADDTGYIMTSKNSWFKVRAKR 525
+ E GEVAGDY W TFDM L+ + +L + + LT P F + FW +Q+PKL CM++VS+ G +CR FC DD GYI+T+KNS FKV R
Sbjct: 101 LCEEGEVAGDYEESWTKTFDMVFLIFMLTYLIILLVLTALYSPQYFSDTTFWLMQLPKLGCMMLVSLLGGIICRCFCSVDDKGYIITNKNSAFKVNYTR 199
BLAST of mRNA_E-fasciculatus_F_contig1584.4011.1 vs. uniprot
Match: T0QRL0_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QRL0_SAPDV) HSP 1 Score: 103 bits (257), Expect = 7.230e-23 Identity = 50/111 (45.05%), Postives = 66/111 (59.46%), Query Frame = 1
Query: 193 DSLSGSKSGSQRVIEAGEVAGDYSLDWKGTFDMTLLLVTVAWLAVNIGLTLCIQPTLFRNAEFWALQVPKLACMIVVSIFAGSLCRYFCPADDTGYIMTSKNSWFKVRAKR 525
D+L+ K + E G+VAGDY W TFDM LL + +L V + LT P F + +FW +Q+PKL CM+ VS+ G +CR FC D GYIMT+K+S FKV R
Sbjct: 98 DALNKIKKEKSSLCEEGDVAGDYDAPWTQTFDMIFLLGMILYLVVLLVLTYLYAPEYFSSIDFWLIQLPKLGCMMAVSLLGGLVCRCFCEVDGKGYIMTNKSSVFKVNYTR 208 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1584.4011.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1584.4011.1 >prot_E-fasciculatus_F_contig1584.4011.1 ID=prot_E-fasciculatus_F_contig1584.4011.1|Name=mRNA_E-fasciculatus_F_contig1584.4011.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=178bp MPLAALVRTNASSFPHPLATVLLPSSYYSMENGAGNGAGNGVGNGAGKGLback to top mRNA from alignment at E-fasciculatus_F_contig1584:1607..3496- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1584.4011.1 ID=mRNA_E-fasciculatus_F_contig1584.4011.1|Name=mRNA_E-fasciculatus_F_contig1584.4011.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1890bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1584:1607..3496- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1584:1607..3496- >mRNA_E-fasciculatus_F_contig1584.4011.1 ID=mRNA_E-fasciculatus_F_contig1584.4011.1|Name=mRNA_E-fasciculatus_F_contig1584.4011.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1068bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1584:1607..3496- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |