mRNA_E-fasciculatus_F_contig15835.4006.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15835.4006.1 vs. uniprot
Match: D8LPZ6_ECTSI (CBF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ6_ECTSI) HSP 1 Score: 515 bits (1327), Expect = 7.520e-170 Identity = 280/309 (90.61%), Postives = 282/309 (91.26%), Query Frame = 1
Query: 1 AQMALEALKDLFITNLLPDSRKLVPFESRPLLQALASVTEEGSKGQGGGGDSVPGGGRGVNSPGGKAAGKALLMWYYEDQILNRFYRLVEAIEAGLRDTVENFKRFSLEAAKDLLEAKPEGEGRLLTLLVNKLGDPDRKISSKVIHLLQRLLAKHPAMKGVVVREVQQYLHRPGLQPKAVYAGIIFLNQVYLTAGEDGAIASTLVQTYLRLFEGATSSPPPANDGKKNKGKQHGKG---KKNGENAASFYAGGSGAKLLSALLTGVNRARPYLPPGDPGVEGRTASLFRVAHTGGFATATQALSLLFQV 918
AQMALEALKDLFITNLLPDSRKLVPFE+RPLLQALASVTEEG+KGQGGGGDSVPGGGRGVNSPGGKAAGKALLMWYYEDQILNRFYRLV AIEAG RDTVENFKRFSLEAAKDLLEAKPEGEGRLL LLVNKLGDPDRKISSKVIHLLQRLLAKHPAMKGVVVREVQQYLHRPGLQPKAVYAGIIFLNQVYLTAGEDGAIASTLVQTYLRLFEGATSS KKN ENA SFYAGGSGAKLLSALLTGVNRARPYLPPGDPGVEGRTASLFRVAHTGGFAT TQALSLLFQV
Sbjct: 310 AQMALEALKDLFITNLLPDSRKLVPFETRPLLQALASVTEEGNKGQGGGGDSVPGGGRGVNSPGGKAAGKALLMWYYEDQILNRFYRLVGAIEAGSRDTVENFKRFSLEAAKDLLEAKPEGEGRLLALLVNKLGDPDRKISSKVIHLLQRLLAKHPAMKGVVVREVQQYLHRPGLQPKAVYAGIIFLNQVYLTAGEDGAIASTLVQTYLRLFEGATSSSXXXXXXXXXXXXXXXXXXXXKKNEENA-SFYAGGSGAKLLSALLTGVNRARPYLPPGDPGVEGRTASLFRVAHTGGFATTTQALSLLFQV 617
BLAST of mRNA_E-fasciculatus_F_contig15835.4006.1 vs. uniprot
Match: A0A835ZC94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC94_9STRA) HSP 1 Score: 236 bits (602), Expect = 1.030e-66 Identity = 152/359 (42.34%), Postives = 188/359 (52.37%), Query Frame = 1
Query: 1 AQMALEALKDLFITNLLPDSRKLVPFESRPLLQALASVTEEGSKGQGGGGDSVPGGGRGVNSPGGKAAGKALLMWYYEDQILNRFYRLVEAIEAGLR-----------------------DTVENFKRFSLEAAKDLLEAKPEGEGRLLTLLVNKLGDPDRKISSKVIHLLQRLLAKH----PAMKG--------------------------VVVREVQQYLHRPGLQPKAVYAGIIFLNQVYLTAGEDGAIASTLVQTYLRLFEGATSSPPPANDGKKNKGKQHGKGKKNGENAASFYAGGSGAKLLSALLTGVNRARPYLPPGDPGVEGRTASLFRVAHTGGFATATQALSLLFQV 918
AQMA EALKDLFI++LLPD R+LVPF RPLLQ + A K LLMWY+E ++L R+ LV A++A + D+V N KR +EAA+DLLEAKP GE +LL +LVNK GDPDRK+++K IHLLQ L + AM+G VVVREVQQYLHRPGL PKA+YAG++FL+QVYLTA EDGA+A+ L+ TY +LFE + AG ++LLSALLTGVNRA PYL G + LF++ H F+TATQAL LLFQV
Sbjct: 282 AQMAQEALKDLFISDLLPDERRLVPFRERPLLQFEEWAPNFKEQ-----------------------AAKTLLMWYFEGELLRRYGALVTALDAATKVRRYLSVLRLGGGWVAALHAATKDSVSNTKRSGMEAARDLLEAKPTGEAQLLAILVNKFGDPDRKVANKGIHLLQHALPQALNELSAMRGIVREQVLNKHXXXXXXXXXXXXXXXXVVVREVQQYLHRPGLAPKALYAGVVFLSQVYLTAEEDGALAAELIGTYFKLFE------------------------------LAVQAGDLKSRLLSALLTGVNRAHPYLDSGSEALATHVDELFKLVHQSNFSTATQALMLLFQV 587
BLAST of mRNA_E-fasciculatus_F_contig15835.4006.1 vs. uniprot
Match: A0A6H5L5C9_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5C9_9PHAE) HSP 1 Score: 226 bits (576), Expect = 3.040e-63 Identity = 125/143 (87.41%), Postives = 127/143 (88.81%), Query Frame = 1
Query: 1 AQMALEALKDLFITNLLPDSRKLVPFESRPLLQALASVTEEGSKGQGGGGDSVPGGGRGVNSPGGKAAGKALLMWYYEDQILNRFYRLVEAIEAGLRDTVENFKRFSLEAAKDLLEAKPEGEGRLLTLLVNKLGDPDRKISSK 429
AQMALEALKDLFITNLLPDSRKLVPFESRPLLQALASVTEEG+KGQGGGG+SVP GGRGVN P GKAAGKALLMW F RLV AIEAG RDTVENFKRFSLEAAKDLLEAKPEGEGRLL LLVNKLGDPDRKISSK
Sbjct: 99 AQMALEALKDLFITNLLPDSRKLVPFESRPLLQALASVTEEGNKGQGGGGESVPEGGRGVNGPRGKAAGKALLMW---------FSRLVGAIEAGSRDTVENFKRFSLEAAKDLLEAKPEGEGRLLALLVNKLGDPDRKISSK 232
BLAST of mRNA_E-fasciculatus_F_contig15835.4006.1 vs. uniprot
Match: A0A7S2LTW6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LTW6_9STRA) HSP 1 Score: 202 bits (515), Expect = 8.540e-56 Identity = 125/307 (40.72%), Postives = 179/307 (58.31%), Query Frame = 1
Query: 1 AQMALEALKDLFITNLLPDSRKLVPFESRPLLQALASVTEEGSKGQGGGGDSVPGGGRGVNSPGGKAAGKALLMWYYEDQILNRFYRLVEAIEAGLRDTVENFKRFSLEAAKDLLEAKPEGEGRLLTLLVNKLGDPDRKISSKVIHLLQRLLAKHPAMKGVVVREVQQYLHRPGLQPKAVYAGIIFLNQVYLT-AGEDGAIASTLVQTYLRLFEGATSSPPPANDGKKNKGKQHGKGKKNGENAASFYAGGSGAKLLSALLTGVNRARPYLPPGDPGVEGRTASLFRVAHTGGFATATQALSLLFQV 918
A M+ EAL++LF+ LP RKL+P RPL + V G GGG N+P + + LL+W +E+ + R+ + I L D ++ K F L DLL +PE E +LL++ VNK+GDP +K+++ H L+RLL +HPAM +V REVQQ HRP L PKA+Y+ ++FLNQ+ LT + E ++ + L++TY RLFE A G N+ K+ GK K++ E + AG +LLSALLTGVNRA PYLP D + +L+R++H+ A ATQAL LL+Q+
Sbjct: 52 ATMSGEALQNLFVDVYLPSDRKLIPLSQRPLHEYERMV----GNGNAGGGKXXXKNNSAGNAPIKTLSPRVLLLWRFEELVKERYSHFLSLISTWLNDALDMHKTFGLRTTIDLLSERPESEVQLLSMAVNKIGDPAKKVAAAAGHQLRRLLEQHPAMTEIVAREVQQLAHRPHLSPKALYSCVVFLNQLKLTQSNEANSLPAALIRTYFRLFEVAIK-------GDANEEKKKGKRKESNETDS---AGKIRGRLLSALLTGVNRAHPYLPKSDDAMIEHIDALYRISHSAPPAAATQALMLLYQL 344
BLAST of mRNA_E-fasciculatus_F_contig15835.4006.1 vs. uniprot
Match: A0A4D9CW61_9STRA (CBF domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CW61_9STRA) HSP 1 Score: 196 bits (497), Expect = 8.760e-53 Identity = 126/312 (40.38%), Postives = 167/312 (53.53%), Query Frame = 1
Query: 1 AQMALEALKDLFITNLLPDSRKLVPF---ESRPLLQALASVTEEGSKGQGGGGDSVPGGGRGVNSPGGKAAGKALLMWYYEDQILNRFYRLVEAIEAGLRDTVENFKRFSLEAAKDLLEAKPEGEGRLLTLLVNKLGDPDRKISSKVIHLLQRLLAKHPAMKGVVVREVQQYLHRPGLQPKAVYAGIIFLNQVYLTAGEDGAIASTLVQTYLRLFEGATSSPPPANDGKKNKGKQHGKGKKNGENAASFYAGGSGAKLLSALLTGVNRARPYLPPG---DPGVEGRTASLFRVAHTGGFATATQALSLLFQV 918
AQMA+EAL+DL NLLP RKLVP+ + L A A +E+ ++ + L + ++EDQ+ R L++ +E DTV +FKRF+L LL+ +PE E RLL++LVNKLGD ++K++ +LL+RLLA HPAMK VV REVQQ+LHRP LQP+ +Y GI FL Q+YL G D +A LVQTYL LF+ A + G K+LSALL+GV+RA PYL G + + +FR H F TA QAL LL QV
Sbjct: 204 AQMAIEALQDLLEHNLLPPERKLVPWARQDEASLPPAAAGDSEQRARRE-----------------------ACLALRFFEDQLKQRVAVLIDRLEKATHDTVTSFKRFALTGVAGLLQGRPEQEERLLSILVNKLGDVEKKVAPHAAYLLRRLLAAHPAMKVVVAREVQQFLHRPNLQPRPLYNGISFLGQLYLRKGSDTDLALGLVQTYLSLFDRALKT-----------------------------GGELSEKMLSALLSGVHRATPYLDAGGLAEGPLGAHLEDIFRTVHQASFKTAVQALMLLAQV 463
BLAST of mRNA_E-fasciculatus_F_contig15835.4006.1 vs. uniprot
Match: K0SQJ6_THAOC (CBF domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SQJ6_THAOC) HSP 1 Score: 190 bits (483), Expect = 1.200e-51 Identity = 130/313 (41.53%), Postives = 169/313 (53.99%), Query Frame = 1
Query: 4 QMALEALKDLFITNLLPDSRKLVPFESRPLLQALASVTEEGSKGQGGGGDSVPGGGRGVNSPGGKAAGKALLMWYYEDQILNRFYR-LVEAIEAGLRDTVENFKRFSLEAAKDLLEAKPEGEGRLLTLLVNKLGDPDRKISSKVIHLLQRLLAKHPAMKGVVVREVQQYLHRPGLQPKAVYAGIIFLNQVYLTAGED-------GAIASTLVQTYLRLFEGATSSPPPANDGKKNKGKQHGKGKKNGENAASFYAGGSGAKLLSALLTGVNRARPYLPPGDPGVEGRTASLFRVAHTGGFATATQALSLLFQV 918
QMA EA+ DLF ++LP RKLV ++RPL EG K SP + LL+W YE+ I+ R+ L + L E K+ +L A LL PEGE LLTL+VNK+GDP RKI+S H L+ +L +HP M VV REVQQ HRP L P+A+Y +IFLNQ+ L+ D G++ S+L+ TY LFE AN KNK +N++S ++LLSALLTGVNRA PYLP D G+E +L+R++HT A ATQAL LLFQ+
Sbjct: 192 QMASEAISDLFANSILPHDRKLVSLDNRPLF------LYEGGK---------------TLSP------RVLLLWRYEEMIMQRYASYLSRYLGRTLSGEDEQSKKNALVTASSLLVNIPEGEELLLTLIVNKIGDPSRKIASAAGHQLRLVLEEHPVMINVVAREVQQLAHRPHLSPRALYNCVIFLNQMQLSRDTDDNSADSGGSLPSSLINTYFHLFEMTCKKSEAANSKGKNK---------QPKNSSSAMK----SRLLSALLTGVNRAHPYLPLKDAGMERHIDALYRISHTAPPAAATQALMLLFQL 464
BLAST of mRNA_E-fasciculatus_F_contig15835.4006.1 vs. uniprot
Match: K3WFJ7_GLOUD (CBF domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFJ7_GLOUD) HSP 1 Score: 184 bits (466), Expect = 9.470e-49 Identity = 126/310 (40.65%), Postives = 163/310 (52.58%), Query Frame = 1
Query: 1 AQMALEALKDLFITNLLPDSRKLVPFESRPLLQALASVTEEGSKGQGGGGDSVPGGGRGVNSPGGKAAGKALLMWYYEDQILNRFYRLVEAIEAGLRDTVENFKRFSLEAAKDLLEAKPEGEGRLLTLLVNKLGDPDRKISSKVIHLLQRLLAKHPAMKGVVVREVQQYLHRPGLQPKAVYAGIIFLNQVYLT-AGEDGAIASTLVQTYLRLFEGATSSPPPANDGKKNKGKQHGKG---KKNGENAASFYAGGSGAKLLSALLTGVNRARPYLPPGDPGVEGRTASLFRVAHTGGFATATQALSLLFQV 918
+ MA+++LKDLFI NLLPD R+L F PL A+ L++W++E + F +LV + G+ D V+N KR + AA LL AKPE E LL +LVNKLGDPDRKI+S + LQ LL +H AMK VV+ EV++ L RP + + Y I+FLNQ+YL +G+D +A+ L+ Y LF + K K K KG KKN E AA+ G KLLSALL GVNRA PY EG +LF V H +T+ QAL LLFQV
Sbjct: 217 SMMAVDSLKDLFINNLLPDDRRLNFFHQNPLDHPDANDGH-------------------------------LVVWFFEHCLKTAFAQLVGVLADGMDDAVDNHKRACIRAANALLAAKPEQEAVLLAMLVNKLGDPDRKIASYIHKTLQDLLQEHSAMKRVVIDEVERVLTRPQVSDRTKYNAILFLNQIYLDKSGDDADLAAHLITVYFGLFTKEVHAEDARVLAAKKKEKHFKKGSHKKKNHEPAATV---GMDRKLLSALLVGVNRAFPYAKATSANFEGEIDALFTVVHRAHHSTSVQALMLLFQV 492
BLAST of mRNA_E-fasciculatus_F_contig15835.4006.1 vs. uniprot
Match: A0A662Y153_9STRA (CBF domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y153_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.770e-48 Identity = 121/307 (39.41%), Postives = 160/307 (52.12%), Query Frame = 1
Query: 7 MALEALKDLFITNLLPDSRKLVPFESRPLLQALASVTEEGSKGQGGGGDSVPGGGRGVNSPGGKAAGKALLMWYYEDQILNRFYRLVEAIEAGLRDTVENFKRFSLEAAKDLLEAKPEGEGRLLTLLVNKLGDPDRKISSKVIHLLQRLLAKHPAMKGVVVREVQQYLHRPGLQPKAVYAGIIFLNQVYLTA-GEDGAIASTLVQTYLRLFEGATSSPPPANDGKKNKGK--QHGKGKKNGENAASFYAGGSGAKLLSALLTGVNRARPYLPPGDPGVEGRTASLFRVAHTGGFATATQALSLLFQV 918
MA+++LKDLF+ +LLPD RKL F PL QA AS L++W++E + + +L + AG+ D V++ KR L AA LL AKPE EG LL +LVNKLGDPDRKI++ + +LQ LL +H AMK VVV EV++ L RP + +A Y ++FLNQ+YL A G+D +A L+ Y +F + K K +H K KK N + KLLS+LL GVNRA PY SLF V H +T+ QAL LLFQV
Sbjct: 186 MAVDSLKDLFLNSLLPDDRKLRFFHQHPLQQAQASQAH-------------------------------LVLWFFEHCLKTAYAQLTAVLAAGMDDAVDSHKRACLRAASALLRAKPEQEGVLLGMLVNKLGDPDRKIAAYLHRMLQELLREHSAMKRVVVDEVERLLTRPKVSDRAKYNAVLFLNQIYLDADGDDADLAGHLISVYFGIFSKEVHGRGDEQEKSKKTEKPAKHKKSKKKASNGPAADEA-MDRKLLSSLLVGVNRAFPYAKATSANFTEEIDSLFEVVHRAHHSTSVQALMLLFQV 460
BLAST of mRNA_E-fasciculatus_F_contig15835.4006.1 vs. uniprot
Match: A0A5D6XXB7_9STRA (CBF domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXB7_9STRA) HSP 1 Score: 182 bits (463), Expect = 3.000e-48 Identity = 123/307 (40.07%), Postives = 161/307 (52.44%), Query Frame = 1
Query: 1 AQMALEALKDLFITNLLPDSRKLVPFESRPLLQALASVTEEGSKGQGGGGDSVPGGGRGVNSPGGKAAGKALLMWYYEDQILNRFYRLVEAIEAGLRDTVENFKRFSLEAAKDLLEAKPEGEGRLLTLLVNKLGDPDRKISSKVIHLLQRLLAKHPAMKGVVVREVQQYLHRPGLQPKAVYAGIIFLNQVYLT-AGEDGAIASTLVQTYLRLFEGATSSPPPANDGKKNKGKQHGKGKKNGENAASFYAGGSGAKLLSALLTGVNRARPYLPPGDPGVEGRTASLFRVAHTGGFATATQALSLLFQV 918
+ MA+++LKDLFI NLLPD R+L F L A T+E +W++E + F +LV + +G+ D V+N KR + AA LL AKPE E LL +LVNKLGDPDRKI+S V+ LQ LL +HPAMK VVV EV++ L RP + + Y I+FLNQ+YL +G+D +A+ L+ Y LF + K KG++ K + E A A G KLLSALL GVNRA PY +LF V H +T+ QAL LLFQV
Sbjct: 199 SMMAVDSLKDLFINNLLPDDRRLRFFHQHAL--AHPDATDEHRA-----------------------------LWFFEHCLKTAFAQLVGVLASGMDDAVDNHKRACIRAASALLAAKPEQEAVLLAMLVNKLGDPDRKIASYVLKTLQELLQEHPAMKRVVVDEVERVLTRPQVSDRTKYNAILFLNQMYLDKSGDDADLAAHLITVYFGLFTKEVHGDAGSQHTSKGKGQRKSKKHRKSEPLA---ADGLDRKLLSALLVGVNRAFPYAKATSAQFHDEIDALFTVVHRAHHSTSVQALMLLFQV 471
BLAST of mRNA_E-fasciculatus_F_contig15835.4006.1 vs. uniprot
Match: A0A2B4RPP4_STYPI (CCAAT/enhancer-binding protein zeta n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RPP4_STYPI) HSP 1 Score: 182 bits (462), Expect = 5.280e-48 Identity = 116/304 (38.16%), Postives = 162/304 (53.29%), Query Frame = 1
Query: 7 MALEALKDLFITNLLPDSRKLVPFESRPLLQALASVTEEGSKGQGGGGDSVPGGGRGVNSPGGKAAGKALLMWYYEDQILNRFYRLVEAIEAGLRDTVENFKRFSLEAAKDLLEAKPEGEGRLLTLLVNKLGDPDRKISSKVIHLLQRLLAKHPAMKGVVVREVQQYLHRPGLQPKAVYAGIIFLNQVYLTAGEDGAIASTLVQTYLRLFEGATSSPPPANDGKKNKGKQHGKGKKNGENAASFYAGGSGAKLLSALLTGVNRARPYLPPGDPGVEGRTASLFRVAHTGGFATATQALSLLFQV 918
+A++ LK+L++T LLP++RKL F PLL + V + GGG D K L++WY+E+Q+ R+ VE ++ L+DT+ N + L A DLL KPE E LL+LL+NK+GDPDRKI+SK ++L + L+ KHP MK VV +E+++ L+RP + KA Y + FLNQ+ LT +D +A+ L+ Y F A G AK+LSALLTGVNRA PY D + +LFR H G F T+ QAL LL+QV
Sbjct: 266 IAVDMLKELWMTLLLPNNRKLRKFSQHPLLSLVEIVHK------GGGWDERD---------------KRLILWYFEEQLKQRYQEFVEVVQKLLQDTLVNIRSKMLGAVFDLLSEKPEQEQVLLSLLINKIGDPDRKIASKAVYLSRTLVTKHPNMKLVVTKEIEKLLYRPNIAIKAQYFAVCFLNQLILTK-QDSELATRLISIYFSFFR------------------------------AFLTKGELEAKMLSALLTGVNRAFPYAKEEDDQYNEQINTLFRTVHIGTFNTSVQALMLLYQV 517 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15835.4006.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15835.4006.1 >prot_E-fasciculatus_F_contig15835.4006.1 ID=prot_E-fasciculatus_F_contig15835.4006.1|Name=mRNA_E-fasciculatus_F_contig15835.4006.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=304bp MALEALKDLFITNLLPDSRKLVPFESRPLLQALASVTEEGSKGQGGGGDSback to top mRNA from alignment at E-fasciculatus_F_contig15835:4..2877- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15835.4006.1 ID=mRNA_E-fasciculatus_F_contig15835.4006.1|Name=mRNA_E-fasciculatus_F_contig15835.4006.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2874bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15835:4..2877- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15835:4..2877- >mRNA_E-fasciculatus_F_contig15835.4006.1 ID=mRNA_E-fasciculatus_F_contig15835.4006.1|Name=mRNA_E-fasciculatus_F_contig15835.4006.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1824bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15835:4..2877- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |