prot_E-fasciculatus_F_contig15829.4003.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15829.4003.1
Unique Nameprot_E-fasciculatus_F_contig15829.4003.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length52
Homology
BLAST of mRNA_E-fasciculatus_F_contig15829.4003.1 vs. uniprot
Match: A0A2D4C8B9_PYTIN (Short-chain specific acyl-CoA dehydrogenase, mitochondrial n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8B9_PYTIN)

HSP 1 Score: 50.8 bits (120), Expect = 1.230e-6
Identity = 25/27 (92.59%), Postives = 26/27 (96.30%), Query Frame = 0
Query:    3 FQAYAIAMEEISRGCASTGVIMSVNNV 29
            + AYAIAMEEISRGCASTGVIMSVNNV
Sbjct:   90 YLAYAIAMEEISRGCASTGVIMSVNNV 116          
BLAST of mRNA_E-fasciculatus_F_contig15829.4003.1 vs. uniprot
Match: V8NQI3_OPHHA (Short-chain specific acyl-CoA dehydrogenase, mitochondrial (Fragment) n=1 Tax=Ophiophagus hannah TaxID=8665 RepID=V8NQI3_OPHHA)

HSP 1 Score: 47.8 bits (112), Expect = 5.420e-6
Identity = 22/26 (84.62%), Postives = 25/26 (96.15%), Query Frame = 0
Query:    5 AYAIAMEEISRGCASTGVIMSVNNVS 30
            AY +A+EEISRGCASTGVIMSVNNV+
Sbjct:   24 AYTVALEEISRGCASTGVIMSVNNVA 49          
BLAST of mRNA_E-fasciculatus_F_contig15829.4003.1 vs. uniprot
Match: A0A2K5C8L9_AOTNA (Acyl-CoA dehydrogenase short chain n=1 Tax=Aotus nancymaae TaxID=37293 RepID=A0A2K5C8L9_AOTNA)

HSP 1 Score: 50.1 bits (118), Expect = 1.110e-5
Identity = 25/28 (89.29%), Postives = 26/28 (92.86%), Query Frame = 0
Query:    3 FQAYAIAMEEISRGCASTGVIMSVNNVS 30
            + AYAIA EEISRGCASTGVIMSVNNVS
Sbjct:   95 YLAYAIATEEISRGCASTGVIMSVNNVS 122          
BLAST of mRNA_E-fasciculatus_F_contig15829.4003.1 vs. uniprot
Match: A0A7S1NP91_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NP91_9EUGL)

HSP 1 Score: 50.1 bits (118), Expect = 1.110e-5
Identity = 25/28 (89.29%), Postives = 26/28 (92.86%), Query Frame = 0
Query:    1 MLFQAYAIAMEEISRGCASTGVIMSVNN 28
            M + AYAIAMEEISRGCASTGVIMSVNN
Sbjct:   98 MDYLAYAIAMEEISRGCASTGVIMSVNN 125          
BLAST of mRNA_E-fasciculatus_F_contig15829.4003.1 vs. uniprot
Match: UPI0009A2AEE1 (LOW QUALITY PROTEIN: short-chain specific acyl-CoA dehydrogenase, mitochondrial n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A2AEE1)

HSP 1 Score: 49.7 bits (117), Expect = 1.130e-5
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 0
Query:    3 FQAYAIAMEEISRGCASTGVIMSVNN 28
            + AYAIAMEEISRGCASTGVIMSVNN
Sbjct:   99 YLAYAIAMEEISRGCASTGVIMSVNN 124          
BLAST of mRNA_E-fasciculatus_F_contig15829.4003.1 vs. uniprot
Match: A0A6A1Q4Q5_BALPH (Uncharacterized protein (Fragment) n=1 Tax=Balaenoptera physalus TaxID=9770 RepID=A0A6A1Q4Q5_BALPH)

HSP 1 Score: 49.7 bits (117), Expect = 1.470e-5
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 0
Query:    3 FQAYAIAMEEISRGCASTGVIMSVNN 28
            + AYAIAMEEISRGCASTGVIMSVNN
Sbjct:   40 YLAYAIAMEEISRGCASTGVIMSVNN 65          
BLAST of mRNA_E-fasciculatus_F_contig15829.4003.1 vs. uniprot
Match: UPI001F125B49 (short-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X3 n=1 Tax=Lynx rufus TaxID=61384 RepID=UPI001F125B49)

HSP 1 Score: 49.7 bits (117), Expect = 1.510e-5
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 0
Query:    3 FQAYAIAMEEISRGCASTGVIMSVNN 28
            + AYAIAMEEISRGCASTGVIMSVNN
Sbjct:  123 YLAYAIAMEEISRGCASTGVIMSVNN 148          
BLAST of mRNA_E-fasciculatus_F_contig15829.4003.1 vs. uniprot
Match: UPI001E26F3CC (short-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X2 n=1 Tax=Pipistrellus kuhlii TaxID=59472 RepID=UPI001E26F3CC)

HSP 1 Score: 49.7 bits (117), Expect = 1.510e-5
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 0
Query:    3 FQAYAIAMEEISRGCASTGVIMSVNN 28
            + AYAIAMEEISRGCASTGVIMSVNN
Sbjct:   92 YLAYAIAMEEISRGCASTGVIMSVNN 117          
BLAST of mRNA_E-fasciculatus_F_contig15829.4003.1 vs. uniprot
Match: A0A8C4PHW9_EQUAS (Acyl-CoA dehydrogenase short chain n=1 Tax=Equus asinus asinus TaxID=83772 RepID=A0A8C4PHW9_EQUAS)

HSP 1 Score: 49.7 bits (117), Expect = 1.520e-5
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 0
Query:    3 FQAYAIAMEEISRGCASTGVIMSVNN 28
            + AYAIAMEEISRGCASTGVIMSVNN
Sbjct:   95 YLAYAIAMEEISRGCASTGVIMSVNN 120          
BLAST of mRNA_E-fasciculatus_F_contig15829.4003.1 vs. uniprot
Match: A0A341B3G5_NEOAA (short-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X2 n=1 Tax=Neophocaena asiaeorientalis asiaeorientalis TaxID=1706337 RepID=A0A341B3G5_NEOAA)

HSP 1 Score: 49.7 bits (117), Expect = 1.520e-5
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 0
Query:    3 FQAYAIAMEEISRGCASTGVIMSVNN 28
            + AYAIAMEEISRGCASTGVIMSVNN
Sbjct:   95 YLAYAIAMEEISRGCASTGVIMSVNN 120          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15829.4003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D4C8B9_PYTIN1.230e-692.59Short-chain specific acyl-CoA dehydrogenase, mitoc... [more]
V8NQI3_OPHHA5.420e-684.62Short-chain specific acyl-CoA dehydrogenase, mitoc... [more]
A0A2K5C8L9_AOTNA1.110e-589.29Acyl-CoA dehydrogenase short chain n=1 Tax=Aotus n... [more]
A0A7S1NP91_9EUGL1.110e-589.29Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
UPI0009A2AEE11.130e-592.31LOW QUALITY PROTEIN: short-chain specific acyl-CoA... [more]
A0A6A1Q4Q5_BALPH1.470e-592.31Uncharacterized protein (Fragment) n=1 Tax=Balaeno... [more]
UPI001F125B491.510e-592.31short-chain specific acyl-CoA dehydrogenase, mitoc... [more]
UPI001E26F3CC1.510e-592.31short-chain specific acyl-CoA dehydrogenase, mitoc... [more]
A0A8C4PHW9_EQUAS1.520e-592.31Acyl-CoA dehydrogenase short chain n=1 Tax=Equus a... [more]
A0A341B3G5_NEOAA1.520e-592.31short-chain specific acyl-CoA dehydrogenase, mitoc... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037069Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamilyGENE3D1.10.540.10coord: 1..43
e-value: 5.4E-6
score: 28.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15829contigE-fasciculatus_F_contig15829:2134..2289 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15829.4003.1mRNA_E-fasciculatus_F_contig15829.4003.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15829 2134..2313 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15829.4003.1 ID=prot_E-fasciculatus_F_contig15829.4003.1|Name=mRNA_E-fasciculatus_F_contig15829.4003.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=52bp
MLFQAYAIAMEEISRGCASTGVIMSVNNVSARVSRMHRVVFHCICVMAIG
H*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037069AcylCoA_DH/ox_N_sf