prot_E-fasciculatus_F_contig1582.4001.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1582.4001.1
Unique Nameprot_E-fasciculatus_F_contig1582.4001.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length178
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1582.4001.1 vs. uniprot
Match: A0A6H5L7K0_9PHAE (Ribosomal_L12 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7K0_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 1.170e-36
Identity = 78/123 (63.41%), Postives = 81/123 (65.85%), Query Frame = 0 
Query:   52 MTLAASMCRGLATGGRRCRTPAPVAAWPLVKRGLDASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGRVLPAGLPPVYRPDAGNSNGGRVRFSTTAGADAATEDTSGPPPAEA 174
            MTLA SMCRGLA+GGRRCRTPAP AAWPLV+RGLD SS                                    ARGRVL AGLPPVYRPDAGN NGGRVRFSTTAGADAATEDTSGPP A+A
Sbjct:    1 MTLATSMCRGLASGGRRCRTPAPAAAWPLVQRGLDVSSKHTAVGPSSTRGCATVVAATPPAVAAAA--------ARGRVLQAGLPPVYRPDAGNGNGGRVRFSTTAGADAATEDTSGPPAAKA 115
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1582.4001.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L7K0_9PHAE1.170e-3663.41Ribosomal_L12 domain-containing protein n=2 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1582contigE-fasciculatus_F_contig1582:16066..17279 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1582.4001.1mRNA_E-fasciculatus_F_contig1582.4001.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1582 16066..17280 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1582.4001.1 ID=prot_E-fasciculatus_F_contig1582.4001.1|Name=mRNA_E-fasciculatus_F_contig1582.4001.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=178bp
HNLCSSLSKKQIAASCTRSCSAPCELQGELLLRRSLSLERPALLLITRSH
TMTLAASMCRGLATGGRRCRTPAPVAAWPLVKRGLDASSSSSSSSKHTAV
GPSSTRGCATAVVVATPPAVAAAAAARGRVLPAGLPPVYRPDAGNSNGGR
VRFSTTAGADAATEDTSGPPPAEAGKGE
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