mRNA_E-fasciculatus_F_contig1.4.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1.4.1 vs. uniprot
Match: D8LQK8_ECTSI (Pyridoxal 5'-phosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQK8_ECTSI) HSP 1 Score: 498 bits (1283), Expect = 1.260e-172 Identity = 239/256 (93.36%), Postives = 247/256 (96.48%), Query Frame = 2
Query: 167 MALRPLGHHATRKRTLSATAAGSKSSSAPPDLANLRENYVSTGIARSTLPSEPHVLMAKWVEEACRCKEVIEPNAMCLSTVGEGGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFPHAAITFWWGALHRSVRFEGEVAMVSEEESDTYFSCRPLGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDNIPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFVYSLASDDTDGAGGEDATATPWTITRLQP 934
MALRPLG H+TRKRTLSAT GS+SSSAPPDLANLRE+YVSTGI R+TLPSEPH+LM KWVEEACRCKEVIEPNAMCL+TVGEGGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFPHAAITFWWGALHRSVRFEGEVAMVSEEESDTYF+CRP GSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDNIPRPPHWGGFRLKPSRVEFWEGQPSRLHDRF+YSLASDD DGAGGEDA A PWTITRLQP
Sbjct: 1 MALRPLGRHSTRKRTLSATT-GSQSSSAPPDLANLREHYVSTGIDRATLPSEPHILMVKWVEEACRCKEVIEPNAMCLATVGEGGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFPHAAITFWWGALHRSVRFEGEVAMVSEEESDTYFNCRPTGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDNIPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFMYSLASDDADGAGGEDAKAMPWTITRLQP 255
BLAST of mRNA_E-fasciculatus_F_contig1.4.1 vs. uniprot
Match: A0A836CLR6_9STRA (Pyridoxal 5'-phosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLR6_9STRA) HSP 1 Score: 238 bits (606), Expect = 3.740e-71 Identity = 118/228 (51.75%), Postives = 155/228 (67.98%), Query Frame = 2
Query: 260 LANLRENYVSTGIARSTLPSEPHVLMAKWVEEACRCKEVIEPNAMCLSTVGEGGKPSARFVLMKGYD-ERGVTWYTNYNSRKSQELKAFPHAAITFWWGALHRSVRFEGEVAMVSEEESDTYFSCRPLGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASE--GDNIPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFVYSLASDDTDGAGGEDATATPWTITRLQP 934
L +LRE Y + + P +P L W+ +A R + +PNAMCL+T G+PS+RFVL+KG D + G +YTNY SRK++EL+A P AA TFWW LHRSVR EG VA VS ESDTY++ RP GS++GAWVSDQS+P+A R+ M K +EVE F ++ ++PRPPHWGG+R+ P R+EFW G+PSRLHDR VY+ +S+ G GG WT+ RLQP
Sbjct: 13 LPDLREEYRADPLEEGCAPGDPMELFQTWLADATRAG-LQDPNAMCLATATPEGRPSSRFVLLKGCDADGGFVFYTNYGSRKARELEANPFAAATFWWAPLHRSVRVEGAVARVSAAESDTYYASRPRGSRLGAWVSDQSQPVAGRDAMDAKQQEVEARFGADDAAGDVPRPPHWGGYRVVPDRIEFWGGRPSRLHDRLVYTRSSEGG-GNGG-------WTMQRLQP 231
BLAST of mRNA_E-fasciculatus_F_contig1.4.1 vs. uniprot
Match: A0A0G4EI35_VITBC (Pyridoxal 5'-phosphate synthase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EI35_VITBC) HSP 1 Score: 238 bits (607), Expect = 9.360e-71 Identity = 116/222 (52.25%), Postives = 149/222 (67.12%), Query Frame = 2
Query: 269 LRENYVSTGIARSTLPSEPHVLMAKWVEEACRCKEVIEPNAMCLSTVGEGGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFPHAAITFWWGALHRSVRFEGEVAMVSEEESDTYFSCRPLGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDNIPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFVYSLASDDTDGAGGEDATATPWTITRLQP 934
LR+ Y G+ +++P++P L +W E+A +EPNAMCLST + G+PSARFVL+KGYDERG +YTNY SRK +EL P A++TFWW AL RS+R EG V V EESD YF+ RP S++GA SDQS PIASRE + K E+E + + +PRP HWGGFRL PSR+EFW+G+ SRLHDR VY+ + +G GGE W I R+QP
Sbjct: 59 LRKEYSMKGLDEASMPADPLTLFGEWFEDAKTVS--VEPNAMCLSTASKEGRPSARFVLLKGYDERGFVFYTNYESRKGKELTENPFASLTFWWEALERSIRIEGRVQQVPPEESDAYFTSRPKASRLGAIASDQSRPIASREALEAKWSELEGRYEGTAE-VPRPLHWGGFRLVPSRIEFWKGRESRLHDRLVYTRGEGEGEG-GGE------WRIERMQP 270
BLAST of mRNA_E-fasciculatus_F_contig1.4.1 vs. uniprot
Match: A0A7S2XW57_9STRA (Pyridoxal 5'-phosphate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW57_9STRA) HSP 1 Score: 236 bits (601), Expect = 1.310e-69 Identity = 118/227 (51.98%), Postives = 148/227 (65.20%), Query Frame = 2
Query: 260 LANLRENYVST-GIARSTLPSEPHVLMAKWVEEACRCKEVIEPNAMCLSTVGE-GGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFPHAAITFWWGALHRSVRFEGEVAMVSEEESDTYFSCRPLGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDNIPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFVYSLASDDTDGAGGEDATATPWTITRLQP 934
LA+ RE Y G+ S + S P+ L +W ++A K V+EPNAMCLST G+PS+R+VL+KG+DERG WYTNY SRK QEL A P A++ FWWG LHRSVR EG+V VS EESD YF RP+GS++GA VS QS P+ SR E+ K +E+ +A ++ RPPHWGGFRL RVEFW G+ SRLHDR VY+ D + W+I RLQP
Sbjct: 74 LADFREEYSKDEGLDESMVSSTPYPLFQRWFDDAKNAK-VVEPNAMCLSTTEPTNGRPSSRYVLLKGFDERGWVWYTNYESRKGQELSANPWASLVFWWGDLHRSVRIEGKVEKVSAEESDEYFYSRPVGSQLGAMVSTQSRPVQSRSELEAKFQELTEAAEKNPSSVVRPPHWGGFRLAADRVEFWHGRSSRLHDRLVYTRP----------DFESVTWSIERLQP 289
BLAST of mRNA_E-fasciculatus_F_contig1.4.1 vs. uniprot
Match: A0A482SL99_9ARCH (Pyridoxamine 5'-phosphate oxidase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SL99_9ARCH) HSP 1 Score: 233 bits (593), Expect = 6.760e-69 Identity = 122/243 (50.21%), Postives = 154/243 (63.37%), Query Frame = 2
Query: 212 LSATAAGSKSSSAPPDLANLRENYVSTGIARST--LPSEPHVLMAKWVEEACRCKEVIEPNAMCLSTVGEGGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFPHAAITFWWGALHRSVRFEGEVAMVSEEESDTYFSCRPLGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDNIPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFVYSLASDDTDGAGGEDATATPWTITRLQP 934
L A S ++SA LA+LR+ Y S G+ + + P L W+ +A + VIEPNAMCLST + KPSARFVL+KG+DERG WYTNY SRK QEL PHAA+TFWWG L RSVR EG+V VS ESD YF+ RP GS+IGAW S+QS I +R + + + V + F EG +PRPPHWGGFRL P R+EFW+G+ SRLHDR V+ + ++ W + RLQP
Sbjct: 27 LGTLAKPSTTASAERPLADLRKEYSSRGLVEENVVISNGPFELFEAWLNDAVAAR-VIEPNAMCLSTCVDN-KPSARFVLLKGFDERGFVWYTNYESRKGQELVDNPHAALTFWWGELERSVRIEGKVERVSSAESDEYFNSRPRGSQIGAWTSNQSRAIENRAILEEQERIVAERFGKEGP-VPRPPHWGGFRLIPHRIEFWKGRASRLHDRLVFERS-----------CLSSAWALERLQP 255
BLAST of mRNA_E-fasciculatus_F_contig1.4.1 vs. uniprot
Match: A0A4D9D582_9STRA (Pyridoxal 5'-phosphate synthase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D582_9STRA) HSP 1 Score: 231 bits (590), Expect = 1.360e-68 Identity = 119/252 (47.22%), Postives = 148/252 (58.73%), Query Frame = 2
Query: 260 LANLRENYVSTGIARSTLPSEPHVLMAKWVEEACRCKEVIEPNAMCLSTVGEGGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFP----------------------HAAITFWWGALHRSVRFEGEVAMVSEEESDTYFSCRPLGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDN-----IPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFVYSLASDDTDGAGGEDATATPWTITRLQP 934
+A+LR+ Y ++G+ +PSEP + +W++EA +V+EPNAMCLSTV GKPS RFVL+KG D+RG TW+TNY SRK +L P AA+TFWWG L RSVR EG V +SEE S YF RP GS+IGAW S+QS PI SR ++ + V F E N IP+P WGGFRL P RVEFW+G+ SRLHDR VY+L ED W +TRLQP
Sbjct: 4 VADLRKEYSASGLVEENMPSEPLSVFRQWLDEAVAA-QVLEPNAMCLSTVSSDGKPSGRFVLLKGLDDRGFTWFTNYQSRKGHDLAGAPVAPALTSSAXXXXXXXXXXXXXFAALTFWWGDLERSVRVEGWVERLSEEASQAYFDSRPRGSRIGAWASEQSRPIGSRYDLESQYASVSARFGGEEGNDSAHPIPKPAQWGGFRLVPERVEFWKGRQSRLHDRLVYTLE---------EDKVGRAWRLTRLQP 245
BLAST of mRNA_E-fasciculatus_F_contig1.4.1 vs. uniprot
Match: W7TXG4_9STRA (Pyridoxal 5'-phosphate synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXG4_9STRA) HSP 1 Score: 232 bits (591), Expect = 1.390e-67 Identity = 137/321 (42.68%), Postives = 174/321 (54.21%), Query Frame = 2
Query: 101 NLPSRAW-----FFAGVAMLCTIRIGVMALRPLGHHATRK---------RTLSATAAGSKS--SSAPPDLANLRENYVSTGIARSTLPSEPHVLMAKWVEEACRCKEVIEPNAMCLSTVGEGGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFP----------------------HAAITFWWGALHRSVRFEGEVAMVSEEESDTYFSCRPLGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDN-----IPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFVYSLASDDTDGAGGEDATATPWTITRLQP 934
NLP R FF V T+ I V + H TR+ R+ TA+ S+S S + +A+LR+ Y ++G+ +PSEP + +W++EA +V+EPNAMCLSTV GKPS RFVL+KG D+RG TW+TNY SRK +L P AA+TFWWG L RSVR EG V +SEE S YF RP GS+IGAW S+QS PI SR ++ + V F E N IP+P WGGFRL P RVEFW+G+ SRLHDR +Y+L ED W +TRLQP
Sbjct: 21 NLPMRGERRTPVFFFKVNAAATLLIIVCCMLRPTHSYTRRALAFLALPNRSHFCTASLSRSFTSRSMSSVADLRKEYSASGLVEENMPSEPLSVFRQWLDEAVAA-QVLEPNAMCLSTVSSDGKPSGRFVLLKGLDDRGFTWFTNYQSRKGHDLAGAPVAPAVTSSAAXXXXXXXXXXXXFAALTFWWGDLERSVRVEGWVERLSEEASQAYFDSRPRGSRIGAWASEQSRPIGSRSDLESQYASVSARFGGEEGNDSAHPIPKPAQWGGFRLVPERVEFWKGRQSRLHDRLMYTLE---------EDKAGRIWKLTRLQP 331
BLAST of mRNA_E-fasciculatus_F_contig1.4.1 vs. uniprot
Match: A0A0J7JR35_9BURK (Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Candidatus Burkholderia pumila TaxID=1090375 RepID=A0A0J7JR35_9BURK) HSP 1 Score: 226 bits (575), Expect = 7.880e-67 Identity = 114/225 (50.67%), Postives = 147/225 (65.33%), Query Frame = 2
Query: 260 LANLRENYVSTGIARSTLPSEPHVLMAKWVEEACRCKEVIEPNAMCLSTVGEGGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFPHAAITFWWGALHRSVRFEGEVAMVSEEESDTYFSCRPLGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDNIPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFVYSLASDDTDGAGGEDATATPWTITRLQP 934
LA+LR+NY + + + + S P W +A ++ EPNAM L+TV G+PSAR VL+KG DERG ++TNY+SRK +EL P A++ F W L R VR EG V S ESDTY++ RPLGS+IGAW SDQS PIA+RE + L+ KE+ + + GD +PRPPHWGG+RL P +EFW+G+PSRLHDR VY AS G+D PW ITRL P
Sbjct: 4 LADLRKNYSRSSLDAADVDSNPICQFETWFAQALDA-QLPEPNAMTLATVDTNGRPSARIVLIKGVDERGFAFFTNYDSRKGRELAENPAASLLFHWIELERQVRIEGRVVKTSALESDTYYASRPLGSRIGAWASDQSRPIANREMLELRKKEISEKY---GDQLPRPPHWGGYRLVPDVLEFWQGRPSRLHDRIVYKRAS-------GDD----PWQITRLAP 213
BLAST of mRNA_E-fasciculatus_F_contig1.4.1 vs. uniprot
Match: A0A136P593_9BACT (Pyridoxamine 5'-phosphate oxidase (Fragment) n=1 Tax=Chlorobi bacterium OLB7 TaxID=1619898 RepID=A0A136P593_9BACT) HSP 1 Score: 226 bits (576), Expect = 8.290e-67 Identity = 104/200 (52.00%), Postives = 135/200 (67.50%), Query Frame = 2
Query: 254 PDLANLRENYVSTGIARSTLPSEPHVLMAKWVEEACRCKEVIEPNAMCLSTVGEGGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFPHAAITFWWGALHRSVRFEGEVAMVSEEESDTYFSCRPLGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDNIPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFVY 853
P LA++R+ Y + G+A + L P A W ++A V EP M L+TV G+PSAR VL+KG+DE G ++TNY RK ++L A PHA+++FWW L R VR EG V VS ESD YF+ RPLGSKIGAW S+QS IA REE+ + +E+E FA G IPRPP WGG+RL+P+ +EFW+G+PSRLHDR Y
Sbjct: 2 PSLADIRQEYTAAGLAEADLDPNPFAQFAHWFDQAMNAS-VPEPTGMTLATVNNAGQPSARVVLLKGFDEHGFLFFTNYEGRKGEDLAAHPHASLSFWWSQLQRQVRIEGRVEKVSAAESDEYFASRPLGSKIGAWASEQSRVIAGREELEERVREIEARFA--GGEIPRPPFWGGYRLRPTMIEFWQGRPSRLHDRLRY 198
BLAST of mRNA_E-fasciculatus_F_contig1.4.1 vs. uniprot
Match: A0A510HIA5_9ACTN (Pyridoxine/pyridoxamine 5'-phosphate oxidase n=2 Tax=Rubrobacter xylanophilus TaxID=49319 RepID=A0A510HIA5_9ACTN) HSP 1 Score: 224 bits (570), Expect = 5.580e-66 Identity = 111/226 (49.12%), Postives = 146/226 (64.60%), Query Frame = 2
Query: 257 DLANLRENYVSTGIARSTLPSEPHVLMAKWVEEACRCKEVIEPNAMCLSTVGEGGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFPHAAITFWWGALHRSVRFEGEVAMVSEEESDTYFSCRPLGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDNIPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFVYSLASDDTDGAGGEDATATPWTITRLQP 934
DLA LR+ Y G++ + +P +W +EA + EPNAM L+T G+PSAR VL+KG+DERG +YTNY RK++EL+A P AA+ F+WG L R VR EG V+ EESD YF+ RP GS++GAW S QSEP+ASREE+ + +EVE F EG +PRPP WGG+R++P R+EFW+G+ SRLHDR +Y +GAG W RLQP
Sbjct: 12 DLAGLRQEYTRAGLSEADADPDPLRQFGRWFDEALAAG-LHEPNAMILATATSDGRPSARTVLLKGFDERGFVFYTNYGGRKARELEANPRAALLFYWGELERQVRIEGIATRVAREESDAYFASRPRGSQLGAWASRQSEPVASREELERRLREVERRF--EGRPVPRPPFWGGYRVRPERIEFWQGRESRLHDRLLYVR-----EGAG--------WRRVRLQP 221 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1.4.1 >prot_E-fasciculatus_F_contig1.4.1 ID=prot_E-fasciculatus_F_contig1.4.1|Name=mRNA_E-fasciculatus_F_contig1.4.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=282bp MATNLPSRAWFFAGVAMLCTIRIGVMALRPLGHHATRKRTLSATAAGSKSback to top mRNA from alignment at E-fasciculatus_F_contig1:74381..79919- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1.4.1 ID=mRNA_E-fasciculatus_F_contig1.4.1|Name=mRNA_E-fasciculatus_F_contig1.4.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5539bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1:74381..79919- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1:74381..79919- >mRNA_E-fasciculatus_F_contig1.4.1 ID=mRNA_E-fasciculatus_F_contig1.4.1|Name=mRNA_E-fasciculatus_F_contig1.4.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1692bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1:74381..79919- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |