mRNA_E-fasciculatus_F_contig158.3991.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig158.3991.1 vs. uniprot
Match: D7FUB8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUB8_ECTSI) HSP 1 Score: 413 bits (1061), Expect = 5.300e-139 Identity = 222/232 (95.69%), Postives = 225/232 (96.98%), Query Frame = 3
Query: 27 MARSATYVLAATAIASSTTAFVPMGGLRLPSSAPQATAERRSGTTCRRGRRTDAAAAVAPLSMAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPADIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSEDAKAVLNERILRLRENEKRKKEEAELETPWDDIGSAFTEVHNMPVGSDDDDVDLDSMVV 722
MARSA YVLAATAI SSTTAFVPMGG RL SSAPQATAERRS TCRRGR+TDAAAAVAPLSMAIRAVES+NADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMP DIEEK+FLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSEDAKAVLNERILRLRENEKRKKEEAELETPWDDIGSAFTEVHNMPVGSDDDDVDLDSMVV
Sbjct: 1 MARSAAYVLAATAIVSSTTAFVPMGGARL-SSAPQATAERRS-ATCRRGRQTDAAAAVAPLSMAIRAVESFNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPKDIEEKFFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSEDAKAVLNERILRLRENEKRKKEEAELETPWDDIGSAFTEVHNMPVGSDDDDVDLDSMVV 230
BLAST of mRNA_E-fasciculatus_F_contig158.3991.1 vs. uniprot
Match: A0A836CAF1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAF1_9STRA) HSP 1 Score: 140 bits (354), Expect = 1.410e-34 Identity = 86/184 (46.74%), Postives = 106/184 (57.61%), Query Frame = 3
Query: 207 LSMAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYV-GEIFQPVPYSQATPQGMPADIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSEDAKAVLNERILRLRENEKRKKEEAELETP-----------WDDIGSAFTEVHNMPVGSDDDDVDLDSMVV 722
LSM I+AV Y++ F L E+ A L YL+H DM EVCKQFD SAEYV GEIFQPVPYS TP GMP E +Y ++ Y IAN+PPVVMF AKIFKPSRLCAV++V G S A A L E + N + + E W+ +G G DDD +LD++V+
Sbjct: 48 LSMGIKAVRDYDSSFTLSEECTALLTAYLQHPDMAKEVCKQFDLTSAEYVDGEIFQPVPYSPNTPHGMPLAFE-RYLNHDDYVIANVPPVVMFKAKIFKPSRLCAVFRVAGRSAAAVAALREAREHAQNNAVPRGAADQSEGSAGAGQSDSGEVWEGLGDVIRASFEEGDGDYDDDDELDALVL 230
BLAST of mRNA_E-fasciculatus_F_contig158.3991.1 vs. uniprot
Match: A0A6U4Q2X6_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4Q2X6_HEMAN) HSP 1 Score: 127 bits (318), Expect = 1.530e-29 Identity = 91/215 (42.33%), Postives = 115/215 (53.49%), Query Frame = 3
Query: 96 MGGLRLPSSAPQATAERRSGTTCRRGRR--TDAAAAVAPLSMAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPADIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSEDAKAVLNERILRLRENEKRK---KEEAELETPWDDIGSAFTEVHNM-PVGSDDDDVDLDSMVV 722
+GG R P A A G R GR+ T+ + L M I+AVE + F+L ++ A L +L M V KQ +AE+ G++FQPVPYS TP GMPAD E+ YFLN Y I N+PP +MF AK FKPSRLCAVY + G+ V E IL +E R+ +PW +G A + M PV DDD DLDSMVV
Sbjct: 31 LGG-RAPMLAAPYQAHPAQGLRIRAGRQGVTEGQGGMWALRMGIKAVEHFEGGFQLSDEVQAALTEHLTSDKMDLTVEKQAHAAAAEFTGKLFQPVPYSVQTPHGMPADFEQ-YFLNPDYAIINVPPQIMFEAKCFKPSRLCAVYALKGVDP----VHREAILSQKEAVSRRGVAPAPPRGGSPWAGMGGAMADASRMDPV---DDDADLDSMVV 236
BLAST of mRNA_E-fasciculatus_F_contig158.3991.1 vs. uniprot
Match: W7TX51_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TX51_9STRA) HSP 1 Score: 124 bits (312), Expect = 1.010e-28 Identity = 74/190 (38.95%), Postives = 106/190 (55.79%), Query Frame = 3
Query: 219 IRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPADIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSEDA-KAVLNERILRL--------RENEKRKKEEAELETP------------WDDIGSAFTEVH-NMPVGSDDDDVDLDSMVV 722
+R VE+++ F L ++ L GY+ +DM EVCKQ C SA + G++FQPVPYS TP GMP + E+ + LN Y I N+PP VMF AKIFKP RLCAV+ ++GL D K +L + R+ + + K + +E + P W+ +G A EV G ++D+ LD+MVV
Sbjct: 48 LRGVETFDGAFTLSPESEGVLVGYMECEDMKKEVCKQAKCTSARFTGQLFQPVPYSPGTPLGMPREFED-FHLNPSYAICNVPPTVMFKAKIFKPPRLCAVFTIEGLDPDEEKKILEKARARMDLQAQAAAHQPMEEKDDGSEEKRPVTVLKGSPKEENWNGVGKALHEVALGEKAGEEEDEAALDAMVV 236
BLAST of mRNA_E-fasciculatus_F_contig158.3991.1 vs. uniprot
Match: A0A8J7F1K5_9CYAN (Uncharacterized protein n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J7F1K5_9CYAN) HSP 1 Score: 114 bits (284), Expect = 1.870e-26 Identity = 54/105 (51.43%), Postives = 76/105 (72.38%), Query Frame = 3
Query: 213 MAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPADIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYK 527
MA++ ++S++++F LE + ATL L ++ + +VC+Q CE E+ +FQPVPYS ATP+GMPA+ E KY +E+Y I N+PP MF AKIFKPSRLCA+YK
Sbjct: 1 MALKIIQSFDSNFTLEPQAKATLFELLTNESFLKQVCQQSKCEQVEFTELLFQPVPYSSATPKGMPAEFE-KYHESEEYIILNVPPNFMFQAKIFKPSRLCAIYK 104
BLAST of mRNA_E-fasciculatus_F_contig158.3991.1 vs. uniprot
Match: A0A7S0VGI5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VGI5_9CRYP) HSP 1 Score: 112 bits (279), Expect = 2.300e-25 Identity = 60/126 (47.62%), Postives = 82/126 (65.08%), Query Frame = 3
Query: 198 VAPLSMAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPADIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLS-EDAKAVLNER 572
+A L M I+AVE++ F+L ++ L G+L M V KQ AE+ G++FQPVPYS TP GMPAD EE YFL+ Y I N+PP +MF AK FKPSRLCAV+ + G++ E + VL+++
Sbjct: 1 LAGLRMGIKAVENFEGGFQLSDEVREALTGHLTSDKMELMVEKQAHAADAEFTGKLFQPVPYSVNTPHGMPADCEE-YFLHPDYLIINVPPQIMFEAKCFKPSRLCAVFALKGVAPEQRETVLSQK 125
BLAST of mRNA_E-fasciculatus_F_contig158.3991.1 vs. uniprot
Match: A0A6P1AAG1_9CYAN (Uncharacterized protein n=1 Tax=Kamptonema sp. SIO1D9 TaxID=2607808 RepID=A0A6P1AAG1_9CYAN) HSP 1 Score: 110 bits (274), Expect = 4.210e-25 Identity = 50/105 (47.62%), Postives = 74/105 (70.48%), Query Frame = 3
Query: 213 MAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPADIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYK 527
MA++ VE+++ F L +T TL +L+++ I ++C+Q E E+ +FQPVPYS +TP+GMPA++E Y+ NE Y I N+PP +MF KIFKPSRLCA+Y+
Sbjct: 1 MALKIVENFDGSFTLPSETQETLFTFLKNEKFIQQICQQVKAEKLEFTELLFQPVPYSISTPKGMPAELES-YYNNEDYAIVNVPPNLMFQCKIFKPSRLCAIYR 104
BLAST of mRNA_E-fasciculatus_F_contig158.3991.1 vs. uniprot
Match: UPI001CCA52C6 (hypothetical protein n=1 Tax=Kovacikia minuta TaxID=2931930 RepID=UPI001CCA52C6) HSP 1 Score: 107 bits (268), Expect = 2.930e-24 Identity = 48/105 (45.71%), Postives = 73/105 (69.52%), Query Frame = 3
Query: 213 MAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPADIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYK 527
M +R ++ ++ DF L+ + ATL LR++ + +V +Q C E+ ++FQPVPYS ATP+GMPA+ E+ Y+ ++ + I N+PP MF AKIFKPSRLCA+Y+
Sbjct: 1 MPLRIIDDFDGDFTLDPEAEATLFELLRNEAFLQQVAQQLQCPKVEFTEQLFQPVPYSAATPKGMPAEFEQ-YYASKDHAIINVPPNFMFKAKIFKPSRLCAIYR 104
BLAST of mRNA_E-fasciculatus_F_contig158.3991.1 vs. uniprot
Match: A0A0S3TRB2_9CYAN (Uncharacterized protein n=10 Tax=Hapalosiphonaceae TaxID=1892263 RepID=A0A0S3TRB2_9CYAN) HSP 1 Score: 107 bits (267), Expect = 4.130e-24 Identity = 51/111 (45.95%), Postives = 75/111 (67.57%), Query Frame = 3
Query: 213 MAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPADIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSE 545
MA++ +E++++ F LE + L L + + ++C+ +CE E+ +FQPVPYS ATP+GMPA+ E KY +E+Y I N+PP +F AKIFKPSRLCAVYK G+ +
Sbjct: 1 MALKIIENFDSSFTLEPQAKENLFKLLTSEAFLNQICQNLECEQVEFTELLFQPVPYSIATPKGMPAEFE-KYHESEEYVIINVPPNFIFTAKIFKPSRLCAVYKKLGIGD 110
BLAST of mRNA_E-fasciculatus_F_contig158.3991.1 vs. uniprot
Match: A0A846H4X5_9CYAN (Uncharacterized protein n=1 Tax=Hassallia byssoidea VB512170 TaxID=1304833 RepID=A0A846H4X5_9CYAN) HSP 1 Score: 105 bits (263), Expect = 1.400e-23 Identity = 49/108 (45.37%), Postives = 71/108 (65.74%), Query Frame = 3
Query: 213 MAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPADIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDG 536
M + ++++++ F LE + +L L + + +VC+Q +CE E+ +FQPVPYS TP+GMP + E KY N +Y I N+PP MFNAKIFKPSRLCA+Y+ G
Sbjct: 1 MPFKIIQNFDSSFTLEPELQKSLFSLLTSEAFLKQVCQQLNCEKVEFTELLFQPVPYSLTTPKGMPGEFE-KYHDNSEYAIINVPPNFMFNAKIFKPSRLCAIYRKIG 107 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig158.3991.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig158.3991.1 >prot_E-fasciculatus_F_contig158.3991.1 ID=prot_E-fasciculatus_F_contig158.3991.1|Name=mRNA_E-fasciculatus_F_contig158.3991.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=233bp MARSATYVLAATAIASSTTAFVPMGGLRLPSSAPQATAERRSGTTCRRGRback to top mRNA from alignment at E-fasciculatus_F_contig158:30960..36170+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig158.3991.1 ID=mRNA_E-fasciculatus_F_contig158.3991.1|Name=mRNA_E-fasciculatus_F_contig158.3991.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5211bp|location=Sequence derived from alignment at E-fasciculatus_F_contig158:30960..36170+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig158:30960..36170+ >mRNA_E-fasciculatus_F_contig158.3991.1 ID=mRNA_E-fasciculatus_F_contig158.3991.1|Name=mRNA_E-fasciculatus_F_contig158.3991.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1398bp|location=Sequence derived from alignment at E-fasciculatus_F_contig158:30960..36170+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |