mRNA_E-fasciculatus_F_contig158.3989.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig158.3989.1
Unique NamemRNA_E-fasciculatus_F_contig158.3989.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig158.3989.1 vs. uniprot
Match: D7FUC1_ECTSI (Methyltransf_25 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUC1_ECTSI)

HSP 1 Score: 398 bits (1022), Expect = 2.440e-126
Identity = 215/277 (77.62%), Postives = 221/277 (79.78%), Query Frame = 3 
Query: 2394 MAPGSRLEDAAHEREVEEEEDDEGVSDNPLPAWMEGDSLAPPCQADMDVVRAIVDFAGVTADDVLYDLGCGDGRICIEAAESRGAKACGVEIEEDLADKFRRRVAAKGLESKVSVVHGDLRDVDLSDATVVVMYLLPDAMADIAQSHLLPLLRRGHGTPATTATSPLP-----GDSATQRGTAGREEAVVEGRTVDSEGAPGVDNQVVSTERGNEEXXXXXXXXXXXXXXXXSMKPCRIVCNTWGVPGATAVREAGVGLHGGVKLRLFTHASLPSVA 3209
            MA GSR +DAAH R+      DEGVSDNPLPAWMEGDSLAPPCQADMDVVRAI+DFAGVTADDVLYDLGCGDGRICIEAAESRGAKACGVEIEEDLA+KFRRRVAAKGL SKVSVVHGDLRDVDLSDATVVVMYLLPDAMADIAQSHLLPLLRRGHGTPATT           GDS TQR         VE  T++SEGAPG DNQ VST  G EE                 MKPCRIVCNTWGVPGATAVREAGVGLHGGVKLRLFTHASLPS A
Sbjct:    1 MASGSRSDDAAHGRQEXXXXXDEGVSDNPLPAWMEGDSLAPPCQADMDVVRAIIDFAGVTADDVLYDLGCGDGRICIEAAESRGAKACGVEIEEDLAEKFRRRVAAKGLNSKVSVVHGDLRDVDLSDATVVVMYLLPDAMADIAQSHLLPLLRRGHGTPATTXXXXXXXXXXXGDSETQR---------VERETLESEGAPGADNQAVSTRGGEEERRLNGGCGNDGGGVGGGMKPCRIVCNTWGVPGATAVREAGVGLHGGVKLRLFTHASLPSAA 268
[Close]
BLAST of mRNA_E-fasciculatus_F_contig158.3989.1 vs. uniprot
Match: A0A835Z0V4_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0V4_9STRA)

HSP 1 Score: 175 bits (444), Expect = 9.370e-47
Identity = 85/134 (63.43%), Postives = 106/134 (79.10%), Query Frame = 3 
Query: 2457 DEGVSDNPLPAWMEGDSLAPPCQADMDVVRAIVDFAGVTADDVLYDLGCGDGRICIEAAESRGAKACGVEIEEDLADKFRRRVAAKGLESKVSVVHGDLRDVDLSDATVVVMYLLPDAMADIAQSHLLPLLRRG 2858
            D+   DNPLP W+EGDSLAPPCQA  DVV+A+++FAGVTA D++YDLGCGDGR C EAAE  GA++CG+EIEEDL   FR  V AKGL+ +V VVHGDL + DLSDAT++VMYLLP+A+A + +  L+  L RG
Sbjct:    3 DDSDEDNPLPRWLEGDSLAPPCQAGYDVVQALLEFAGVTAKDIVYDLGCGDGRFCTEAAEKFGARSCGIEIEEDLVQSFRAAVEAKGLQQRVRVVHGDLLEQDLSDATIIVMYLLPEALA-LLEPKLIRELSRG 135
[Close]
BLAST of mRNA_E-fasciculatus_F_contig158.3989.1 vs. uniprot
Match: A0A662WR70_9STRA (Methyltranfer_dom domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WR70_9STRA)

HSP 1 Score: 153 bits (387), Expect = 9.040e-39
Identity = 84/147 (57.14%), Postives = 103/147 (70.07%), Query Frame = 3 
Query: 2490 WMEGDSLAPPCQADMDVVRAIVDFAGVTADDVLYDLGCGDGRICIEAAESRGAKACGVEIEEDLADKFRRRVAAKGLESKVSVVHGDLRDVDLSDATVVVMYLLPDAMADIAQSHLLPLLRRGHGTPATTATSPLPGDSATQRGTAG 2930
            WMEGDSLAPPCQ+D DVV  IV  A VT DDVL DLGCGDGRICIEAA+  GA+A GVEIEE L ++FR+ +AA GL+  VSV HGDLR+ DLSDATV+V YLLP+A+ ++       L ++G        T  + G + T+R  AG
Sbjct:   31 WMEGDSLAPPCQSDRDVVSKIVAIANVTPDDVLIDLGCGDGRICIEAAKRFGARARGVEIEEFLIERFRQLIAADGLQELVSVSHGDLREEDLSDATVIVTYLLPEALDELTPKFTKLLSQKGRDVRIICNTWGIRGLTPTERHDAG 177
[Close]
BLAST of mRNA_E-fasciculatus_F_contig158.3989.1 vs. uniprot
Match: M4BRJ3_HYAAE (Methyltranfer_dom domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BRJ3_HYAAE)

HSP 1 Score: 148 bits (374), Expect = 3.290e-37
Identity = 77/122 (63.11%), Postives = 96/122 (78.69%), Query Frame = 3 
Query: 2490 WMEGDSLAPPCQADMDVVRAIVDFAGVTADDVLYDLGCGDGRICIEAAESRGAKACGVEIEEDLADKFRRRVAAKGLESKVSVVHGDLRDVDLSDATVVVMYLLPDAMADIAQSHLLPLLRR 2855
            W+EGDSLAPPCQ+D DVV  IV+ A +T DDVL+DLGCGDGRICIEAA+  GA+A GVEIEE L ++FRR VA K L+  VSV HGDL + DLSDATV+V YLLP+A+  ++ + L+ LL +
Sbjct:   18 WIEGDSLAPPCQSDRDVVAKIVEIACLTCDDVLFDLGCGDGRICIEAAKRFGARARGVEIEEFLIERFRRLVAVKDLQQLVSVSHGDLLEEDLSDATVIVTYLLPEALEQLS-AKLIKLLNQ 138
[Close]
BLAST of mRNA_E-fasciculatus_F_contig158.3989.1 vs. uniprot
Match: A0A1V9YP44_9STRA (Methyltransf_25 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YP44_9STRA)

HSP 1 Score: 145 bits (366), Expect = 3.460e-36
Identity = 73/129 (56.59%), Postives = 92/129 (71.32%), Query Frame = 3 
Query: 2439 VEEEEDDEGVSDNPLPAWMEGDSLAPPCQADMDVVRAIVDFAGVTADDVLYDLGCGDGRICIEAAESRGAKACGVEIEEDLADKFRRRVAAKGLESKVSVVHGDLRDVDLSDATVVVMYLLPDAMADIA 2825
            +E  +DDEG  +     W+EGDSLAPPCQ+D D+V+AIVDFAGV   DV++DLGCGDGRICI AA   G +A G+EIE  L  KF + +A  GL   VSV+H DL + DLS ATV+V YLLP+A+  +A
Sbjct:    7 LEWSDDDEGYENEQPFMWLEGDSLAPPCQSDYDIVQAIVDFAGVQPTDVVFDLGCGDGRICIGAARQHGCRAVGIEIEAPLIAKFEQSIAKYGLADLVSVLHADLMEADLSSATVIVTYLLPEALTLLA 135
[Close]
BLAST of mRNA_E-fasciculatus_F_contig158.3989.1 vs. uniprot
Match: A0A425C4H3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A425C4H3_9STRA)

HSP 1 Score: 145 bits (366), Expect = 6.510e-36
Identity = 73/123 (59.35%), Postives = 95/123 (77.24%), Query Frame = 3 
Query: 2445 EEEDDEGVSDNPLPAWMEGDSLAPPCQADMDVVRAIVDFAGVTADDVLYDLGCGDGRICIEAAESRGAKACGVEIEEDLADKFRRRVAAKGLESKVSVVHGDLRDVDLSDATVVVMYLLPDAM 2813
            ++E DE   ++ +  W+EGDSLAPPCQ+D DVV  IV+ A VT DDV++DLGCGDGRICIEAA+  GA+A GVEIEE L ++FR+ + A  ++  VSV HGDL + DLS+ATV+V YLLPDA+
Sbjct:    9 DDESDENEQNSGVFMWIEGDSLAPPCQSDRDVVSKIVEIARVTPDDVVFDLGCGDGRICIEAAKRFGARARGVEIEEFLIERFRKLIVANEIQQLVSVSHGDLLEEDLSEATVIVTYLLPDAL 131
[Close]
BLAST of mRNA_E-fasciculatus_F_contig158.3989.1 vs. uniprot
Match: A0A067CEZ1_SAPPC (Methyltransf_25 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CEZ1_SAPPC)

HSP 1 Score: 144 bits (363), Expect = 7.990e-36
Identity = 91/245 (37.14%), Postives = 117/245 (47.76%), Query Frame = 3 
Query: 2451 EDDEGVSDNPLPAWMEGDSLAPPCQADMDVVRAIVDFAGVTADDVLYDLGCGDGRICIEAAESRGAKACGVEIEEDLADKFRRRVAAKGLESKVSVVHGDLRDVDLSDATVVVMYLLPDAMADIAQSHLLPLLRRGHGTPATTATSPLPGDSATQRGTAGREEAVVEGRTVDSEGAPGVDNQVVSTERGNEEXXXXXXXXXXXXXXXXSMKPCRIVCNTWGVPGATAVREAGVGLHGGVKLRLFT 3185
            +DDEG  +     W+EGDSLAPPCQ+D D+V+AI+DFA V   DV++DLGCGDGRICI AA   G +A G+EIE  L  KF + +A   L+ KV ++H DL D DLS+ATV+V YLLP+A+  +A     P L                 ++A  RG                                                       CRIV NTWG+PG T      VG +  V L L+T
Sbjct:    7 DDDEGYENEQPFMWLEGDSLAPPCQSDYDIVQAIIDFANVQPTDVVFDLGCGDGRICIGAARQHGCRAVGIEIEAPLIAKFEQSIAKYKLQDKVRMLHADLMDADLSEATVIVTYLLPEALTLLA-----PKL-----------------EAALTRG-------------------------------------------------------CRIVSNTWGIPGMTPAARVDVGQYANVPLYLYT 174
[Close]
BLAST of mRNA_E-fasciculatus_F_contig158.3989.1 vs. uniprot
Match: A0A2P4XRJ9_9STRA (Methyltranfer_dom domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XRJ9_9STRA)

HSP 1 Score: 143 bits (361), Expect = 2.010e-35
Identity = 72/108 (66.67%), Postives = 85/108 (78.70%), Query Frame = 3 
Query: 2490 WMEGDSLAPPCQADMDVVRAIVDFAGVTADDVLYDLGCGDGRICIEAAESRGAKACGVEIEEDLADKFRRRVAAKGLESKVSVVHGDLRDVDLSDATVVVMYLLPDAM 2813
            W+EGDSLAPPCQ+D DVV  IV+ A ++  DVL+DLGCGDGRICIEAAE  GA+A GVEIEE L  +FR  + A GL+  VSV HGDL + DLSDATV+V YLLPDA+
Sbjct:   17 WIEGDSLAPPCQSDRDVVSKIVEIAKLSPHDVLFDLGCGDGRICIEAAERFGARARGVEIEEFLIKRFRELIVANGLQQLVSVSHGDLLEEDLSDATVIVTYLLPDAL 124
[Close]
BLAST of mRNA_E-fasciculatus_F_contig158.3989.1 vs. uniprot
Match: H3GGJ4_PHYRM (Methyltranfer_dom domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GGJ4_PHYRM)

HSP 1 Score: 143 bits (360), Expect = 4.030e-35
Identity = 77/124 (62.10%), Postives = 91/124 (73.39%), Query Frame = 3 
Query: 2442 EEEEDDEGVSDNPLPAWMEGDSLAPPCQADMDVVRAIVDFAGVTADDVLYDLGCGDGRICIEAAESRGAKACGVEIEEDLADKFRRRVAAKGLESKVSVVHGDLRDVDLSDATVVVMYLLPDAM 2813
            +EEED+E  +      WMEGDSLAPPCQ+D DVV  IVD A VT +DVL+DLGCGDGRICIEAA+  GA+A GVEIEE L  +FR  + A  L+  VSV HGDL   DLS+AT +V YLLPDA+
Sbjct:   10 DEEEDEEEQNPGAF-MWMEGDSLAPPCQSDRDVVSKIVDIARVTPNDVLFDLGCGDGRICIEAAKRFGARARGVEIEEFLIKRFRELIVANDLQQLVSVSHGDLLAEDLSEATAIVTYLLPDAL 132
[Close]
BLAST of mRNA_E-fasciculatus_F_contig158.3989.1 vs. uniprot
Match: A0A6G0X2H8_9STRA (Methyltransf_25 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X2H8_9STRA)

HSP 1 Score: 142 bits (358), Expect = 4.240e-35
Identity = 69/108 (63.89%), Postives = 82/108 (75.93%), Query Frame = 3 
Query: 2490 WMEGDSLAPPCQADMDVVRAIVDFAGVTADDVLYDLGCGDGRICIEAAESRGAKACGVEIEEDLADKFRRRVAAKGLESKVSVVHGDLRDVDLSDATVVVMYLLPDAM 2813
            W+EGDSLAPPCQ+D DVV  I+  A VT+DDV++DLGCGDGRICI AA   GA A GVEIEE L  KF+ R+    LE KV VVHGDL + DL+ ATV+V YLLP+A+
Sbjct:   20 WLEGDSLAPPCQSDYDVVHEIIRLAKVTSDDVVFDLGCGDGRICIAAARQHGASAVGVEIEEPLITKFKERIGRYKLEDKVQVVHGDLMETDLTRATVIVTYLLPEAL 127
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig158.3989.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUC1_ECTSI2.440e-12677.62Methyltransf_25 domain-containing protein n=2 Tax=... [more]
A0A835Z0V4_9STRA9.370e-4763.43S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A662WR70_9STRA9.040e-3957.14Methyltranfer_dom domain-containing protein n=1 Ta... [more]
M4BRJ3_HYAAE3.290e-3763.11Methyltranfer_dom domain-containing protein n=1 Ta... [more]
A0A1V9YP44_9STRA3.460e-3656.59Methyltransf_25 domain-containing protein n=1 Tax=... [more]
A0A425C4H3_9STRA6.510e-3659.35Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A067CEZ1_SAPPC7.990e-3637.14Methyltransf_25 domain-containing protein n=2 Tax=... [more]
A0A2P4XRJ9_9STRA2.010e-3566.67Methyltranfer_dom domain-containing protein n=1 Ta... [more]
H3GGJ4_PHYRM4.030e-3562.10Methyltranfer_dom domain-containing protein n=1 Ta... [more]
A0A6G0X2H8_9STRA4.240e-3563.89Methyltransf_25 domain-containing protein n=1 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig158contigE-fasciculatus_F_contig158:7507..13065 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score402.9
Seed ortholog evalue1.2e-109
Seed eggNOG ortholog2880.D7FUC1
EggNOG free text desc.Mycolic acid cyclopropane synthetase
EggNOG OGs2RY3R@2759,COG0500@1
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-03_000800.1
Exons5
Model size1289
Cds size819
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig158.3989.1prot_E-fasciculatus_F_contig158.3989.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig158 9900..12656 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928049.8159788-UTR-E-fasciculatus_F_contig158:7506..75671622928049.8159788-UTR-E-fasciculatus_F_contig158:7506..7567Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig158 7507..7567 +
1695995802.978665-UTR-E-fasciculatus_F_contig158:7506..75671695995802.978665-UTR-E-fasciculatus_F_contig158:7506..7567Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig158 7507..7567 +
1622928049.8856106-UTR-E-fasciculatus_F_contig158:12656..130651622928049.8856106-UTR-E-fasciculatus_F_contig158:12656..13065Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig158 12657..13065 +
1695995803.0300689-UTR-E-fasciculatus_F_contig158:12656..130651695995803.0300689-UTR-E-fasciculatus_F_contig158:12656..13065Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig158 12657..13065 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928049.8271213-CDS-E-fasciculatus_F_contig158:9899..100881622928049.8271213-CDS-E-fasciculatus_F_contig158:9899..10088Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig158 9900..10088 +
1695995802.9909003-CDS-E-fasciculatus_F_contig158:9899..100881695995802.9909003-CDS-E-fasciculatus_F_contig158:9899..10088Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig158 9900..10088 +
1622928049.8406901-CDS-E-fasciculatus_F_contig158:10508..105841622928049.8406901-CDS-E-fasciculatus_F_contig158:10508..10584Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig158 10509..10584 +
1695995803.001443-CDS-E-fasciculatus_F_contig158:10508..105841695995803.001443-CDS-E-fasciculatus_F_contig158:10508..10584Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig158 10509..10584 +
1622928049.8606634-CDS-E-fasciculatus_F_contig158:11531..116021622928049.8606634-CDS-E-fasciculatus_F_contig158:11531..11602Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig158 11532..11602 +
1695995803.0114782-CDS-E-fasciculatus_F_contig158:11531..116021695995803.0114782-CDS-E-fasciculatus_F_contig158:11531..11602Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig158 11532..11602 +
1622928049.8751566-CDS-E-fasciculatus_F_contig158:12173..126561622928049.8751566-CDS-E-fasciculatus_F_contig158:12173..12656Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig158 12174..12656 +
1695995803.020731-CDS-E-fasciculatus_F_contig158:12173..126561695995803.020731-CDS-E-fasciculatus_F_contig158:12173..12656Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig158 12174..12656 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig158.3989.1

>prot_E-fasciculatus_F_contig158.3989.1 ID=prot_E-fasciculatus_F_contig158.3989.1|Name=mRNA_E-fasciculatus_F_contig158.3989.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=273bp
MAPGSRLEDAAHEREVEEEEDDEGVSDNPLPAWMEGDSLAPPCQADMDVV
RAIVDFAGVTADDVLYDLGCGDGRICIEAAESRGAKACGVEIEEDLADKF
RRRVAAKGLESKVSVVHGDLRDVDLSDATVVVMYLLPDAMADIAQSHLLP
LLRRGHGTPATTATSPLPGDSATQRGTAGREEAVVEGRTVDSEGAPGVDN
QVVSTERGNEEGRRRGDGGSDGGGVGGSMKPCRIVCNTWGVPGATAVREA
GVGLHGGVKLRLFTHASLPSVA*
back to top

mRNA from alignment at E-fasciculatus_F_contig158:7507..13065+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig158.3989.1 ID=mRNA_E-fasciculatus_F_contig158.3989.1|Name=mRNA_E-fasciculatus_F_contig158.3989.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5559bp|location=Sequence derived from alignment at E-fasciculatus_F_contig158:7507..13065+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GCTGTCTCCCGCTGCTGCCGTGTATTGCTGCGCTGCGATATAAGACACCT
GACCGTGACAGGTGAGACCGACTGCTGTTTTGCTTCCTTCCGTGACTGGA
TTCCGGCCGTAGCATATAGCACCAGTCGAGAGAGAGCAAGAGAGATGCTG
CTGATCAACTCACGGGACTGTCAAAGTTGAGGTGCTTTTCTGTAGGCGGC
GTGGTTCCCGGTTCGTTGCAAAGTTGCAGTATGTCACGAAGTGCTTAACT
GCTATTCAGAGCATCGCACCTGTTCATCTCACGTGGTTATGAAGCGATAA
ACCTGGAGGCCCAACAGCGGTTGTGAACCGCTGAACCGAGAAAAAGCCAT
ATTTTGCGCAACACGAGACAGCATCAAACGCTTCTCGTCATGCTTTGTCT
ACAGAGAGTAGTTGCCTGGTACATACGATTAACGATTGTGTAGATGGAGG
GAGCCAACACAGAAATTAAATTACATGCCCCAGCCCATTTCAATATTTCA
ATCCACGAACACGCACTTTGTCCATTCTGAACTGTTTTCTACTGTACACG
TTGTCAGAGAATACGTCGAAGTTATTAGAGAAAGGCTCGACCATTACATG
TAGAGTACAGCAGTTTGAGTCAGCGAGAAGTGGGTGTTCCTACCTACAGG
CATTTGTTATTCTTACCCGCTTGCAGCTGCAAGCGCGGGTTGCTTTGGCT
TCTTCCACGTGTCTGGTGCTACATCGACAGCCACCACTCCTTACGCCTGG
ATGGATTCGAGACTCGTAAGGAAGTCTGCGCCGTCTTGGTCGCACATTAG
TGGCAAATGCGGTGAATCTCGCCGCCATCCGGATCCTCCACCTCCCCACA
AACGACGTGCATGCGGCCACCACAGCCACCTTGACAACTGTGCGCCCCGG
TTGGACCCGGTGCCGAGTCTGGAAGTTTGCAAGCTGCGCCACCTGGTGTT
TGTGTGTGCGTGTGCCCCTCGCCATGTGCTTTGAGTAGGTGCTAGCGCAA
GCGCGGGCGGGTCTCCGCAATATTTTAATTGATCACCGCTATCGGTGGCT
GAAAACAGCTAGAATGACCTTTACTGCCGGGTTTTGTTCGGTCATTAACT
GCCAAACTGGGGTGTAGCCGTGCCACGTTATTTTGGAACCGCTACATGTA
TTCAGGGCATCACCCAGATGTTTGAAACACACACAATTACAACGTTGTCC
CGCTCTGCGTGGACACCAACAAAGGTACGTTCGTCCATCGATGCAACGGT
CGAAAAAACAAAGAGAGTACCGTGAGAGGAGGAGAGGTGACACCCCCCCC
TAGACCGAGCTCGATTGCTTCGCAACCAAGCTTGTGCCATCACCAAAAAT
GGTGGTTCTTCAAGCCTCTCGTCGAGGGCTTTTCGTAGACGTATGGGACT
CTTGACTCTTTCGGCACCCACTTGGTGGTGGAACAATCTAATCTAATCTA
TTGAGCTTTGAAAGGCGGTCAAAGAGGGGTATCATCTCTCCGCCTCTTGT
GGTAGTCTGACAAAACAAGCACACGTTTCCTTCGTCTCACTGCTGTCTGT
GCCTCCTCTTGCCCGAGTGTGAGACGGTCTCGCACTCGGGTAAGAGGAGG
CAGGCACAAGGAGTCAAACGAACAGGTGTGTTGCTGCGTTTTTTTTTCGT
TTATTCGAGTCTTGCCTCCTTTATTTATTCACCCGTTGTATCGATGTAGG
TACATACCTACCTGTGTTGCTGTCCAAGACCCGGAGATGTTGCACTTGTT
TTGTGCTTCAATCGTCTGTGTTCTGCACGCGTTCGAAGCGAAAACTCACT
TCATACGACTGTACCGTGTTTGTACATAGTCATAGGCAACATAGACGGAC
GGCAGACGTGTGTTCGTTCGTACGTATGATTGTCCTGTGTACGTGTGTGG
GCGCGGTTGTCGAAAGCTAAAGGTTGCGATTGCGCGGGAGTGAACCTTGG
ACGTCTGTGCTCTCAGTGCGGTTTTGCGGTGTGGTGGTTTCAATGTCCAT
CATCGACCAAACACCACACCACACACCCTCACTGGCACACCGACACCCTG
CAGCCAACGTCCGCTGAAACAGCCAGTTACACCACGGGTTCTACATACAC
CACCGTTACTTTTTGCTAAATACGACGGTGGTCATCGGAGTCACACCAAC
GTGAAAAAATGGTCAATCATATCAAGTCTACACGTACACCTGAAAAAGCA
AACCAGCTTCTACATGAACAAACCGCGACTCGTACCAAGTCTACACGTAA
ACCCGAACATACAGCTACTACATGACCGCGACTGTGCCGTGGGTTTCTTG
TTGGCCTTTCCTGCTGTACACGAAAAAAAAAAAAACTTCCTTTCGATCCG
CGCTTTGGATGGTTGTGTTGCTGGGGGTCGCACGAAACCATAGATGGCGC
CGGGGTCTCGATTGGAAGACGCTGCACATGAGCGAGAAGTGGAGGAAGAA
GAAGACGATGAGGGGGTCAGCGACAACCCATTGCCTGCGTGGATGGAGGG
AGACTCGCTAGCGCCTCCCTGCCAAGCCGACATGGACGTCGTCCGAGCCA
TCGTCGATTTTGCGGGGGTTACCGCGGACGACGTAAGTTTTGCGGCATGT
GCTGTGCTTGTTTTTTGGCGGTTGGCGTTGTTGTTGTTCTGGACATCAAG
ATGCCGTCGTCGCTTTTGAAAATGATACTGATTGAGGTAACGATAGGGAT
GCATCTTTGTGTCTGGCTGTTTCTGGTGCTACTGGTTCCGCAGGTCTCTG
CCATGACCCCACCACTCCTGCCCAGGACAGACTGCATGACACTAACTTCA
CACGTCTTCAAGCATGTTCATTTTCTTCATCCATGCAGACACACCAACGT
CGAAGTATGTGCGCTGACCATATCACTTACTGCCTCCTGCCGTGTACTGC
ATCGCTAATATTTTCTCTTGTATGGCTAGCAAAGTGAGATCACCCGCAGA
ACGCCTTCCGTGTTACTCGTAATCCACGAATCTTAATCTTTGCCGAACGA
AGGTTTTGTACGATCTCGGGTGCGGAGACGGGCGCATCTGCATTGAGGCC
GCCGAAAGCCGGGGGGCCAAGGCTTGCGGTAAGGGGCAGGTTGGTGGTTT
CTCCGCTATGCACGCGCCTGCTTTTTTTCTCTGCTAAATAGTGCCCGCCT
TCGCGTCTGTTCTTGCTGGAGCTCGTATTTTGCCAAGGTTAGCGTTGACG
GAGCATGTTGCATCAGGCTTCAAGATCTCACACCCGACGCCCATCATTCA
ACCGGGGTTCTTCGCCTGATTGGCTGGAAGACTCCGGCGCTCGCTCTTGA
AAACGGTTATCGCAGACGACTGCCACGAATGAGCATACCACCTACCAAAG
GATCAGACATGAGAGTTTAAAACACAGGCGCCGGTCAATGCACTGCTGTA
TTTCGGTGGGTTTCAGTCGCATTCGTTCTCTGGGAGACGTAGGTCCTCCT
GCAACCAACACACGCCCGGTTATCGCGGTTCTCCCGACAGAAATGGGGCT
GCAAAGAGCAGGTACCCAACGAAGGAACACCGGCTTGTCGAGCCGAACGG
ATCTCGTGGGCGATCGAATTTGTTGAACCGAACTCGTCACGTGAGATGTC
TCAAAAAAAATTCGGGTTGCTCGCGGTGGCCTCGGTAACTCATTTCTTTG
GCCTGCTCCTTTTTTGAGCAGGGAAAAAAAGTTGCCTGTTCCAGAATCAG
AAAAGAGGGCGGGGACGACTTTTCAACGTGTACATCGTAAGCAACAGAAA
TCCGCCCCCAACTCTTGTCATGGATGACTGATTAATTCTCAATGTGGGTG
GTTCGTATGTCCCTCCCAGAGCGACGTTGTTCGCTGCTGTTGTGTCGGCT
GTTTCTGTCCTTGCTTGTTTCCACCGTACTTGTCTTACCGATATAAATAC
GACCCTATCTTTTGCTTGCTTGCCCCATCCTTCTTGGTCGAGGTCTTATG
CAGCCTTATTTTCCATGTCCCGTTTACTGGCGTTCGTGCCGTCGTCGTGT
ACGTCGTGTCCAAACGATGTCAAAGGGGTGGAGATCGAGGAAGACTTGGC
GGACAAGTTCCGACGACGAGTCGCCGCGAAAGGCTTGGAGTCGAAGGTGT
GTGTCGCTGGACTTGCGTTTGCGTCGTTCCGTATCAGCAACTCCGTCGCC
TATATAGCTGCTTCCGACGATTGGTGTAGTTTCAGATAATATGAATGTGT
TGTACACAGGAATGGAGGTTTGTTTGTGGCACGCATTCGTCTGATCAGTT
GAAAAAGGTCTGGCTGAGATGTCAGCAGCCGTTCGCAGAATCGAGACAAA
GGGTACCACACGCTGTATGTGAGATGCCATTGGGCTGAAAAACCTAGGCT
ACTCCAGGCGCCGTGACCGATGATGCTCGCTCTCTAGACTATGCCCTGCT
TTTTTGTGGCGACCTCCTCATGTGCGTCCTCTCCGGCCCCTGGTATTTGA
GTCGGTGATTGTCGTCCATTTCACCTTTTGTTTCGACAGCGTCTTTCATT
CGCGACCCCTCCCACAACATCTCGGGGTTGACCTATTTCGATGGCCGGAG
CCTTTCCCTGACCCTCAACCGCTGGCCTTTATTTTTCTCCTCCGTTATAG
CCTGTGCTATCTGTGTGCATTTCCGGCCTGGTTGTCCTACGTTCTTCTGA
CTTGTGGTCTCTGGCAGGTATCGGTCGTTCACGGCGACCTACGAGATGTC
GATCTCTCGGACGCGACGGTGGTGGTGATGTACCTCCTGCCCGACGCCAT
GGCCGACATCGCGCAGTCCCACCTCCTGCCCCTGCTCCGCCGCGGCCACG
GCACCCCCGCAACAACAGCAACATCACCTCTCCCTGGAGACTCGGCCACA
CAGAGGGGTACCGCAGGTCGCGAGGAAGCTGTTGTAGAGGGGCGAACGGT
AGATAGTGAGGGGGCTCCTGGAGTGGACAATCAGGTGGTATCCACAGAGA
GGGGAAACGAAGAGGGTCGCAGGAGGGGTGATGGTGGTAGTGATGGTGGT
GGGGTGGGTGGCAGTATGAAGCCATGCCGAATTGTATGTAACACGTGGGG
CGTGCCGGGAGCGACTGCGGTGCGGGAGGCAGGGGTGGGGCTCCACGGCG
GCGTGAAGCTCCGACTCTTCACGCACGCCTCGCTTCCGAGCGTGGCATGA
TGCAAAACATCCAACCTTTTTGTGTCCTTCGAGCGCTCGTTCTCCACTCC
GATGCGTTCCCATACGGCGGTCTCTATGCATACAAGGGTTGTTCGATATG
TATGTCGAACGTCGAACGAACACCTCACGGGTGCGTATCCATGGTTGGTT
GGGATGGTGGTTGTTGCTTGTTGTTGTGGTTGCCCCTTAAATGTACCAGT
TTGGTTTGCAGCCAGCCCTGGTTTTGTGGAGTGGAAGCTGTCCGCCAGAA
CATGGCGCGAGACTGAATGTAAACATGGAGTAAGGCCACGCAGCTCCGAT
GAAATAAATTCGATGGGAGAGCCCCCACTCTAAAATGGCGCGGTTGGCAG
TTCACCACGGATGGTACAGGAAAAAAAGCATACTACTGCTGCTGTAGACG
ACATGTACG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig158:7507..13065+

>mRNA_E-fasciculatus_F_contig158.3989.1 ID=mRNA_E-fasciculatus_F_contig158.3989.1|Name=mRNA_E-fasciculatus_F_contig158.3989.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1638bp|location=Sequence derived from alignment at E-fasciculatus_F_contig158:7507..13065+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCGCCGGGGTCTCGATTGGAAGACGCTGCACATGAGCGAGAAGTGGA
GGAAGAAGAAGACGATGAGGGGGTCAGCGACAACCCATTGCCTGCGTGGA
TGGAGGGAGACTCGCTAGCGCCTCCCTGCCAAGCCGACATGGACGTCGTC
CGAGCCATCGTCGATTTTGCGGGGGTTACCGCGGACGACATGGCGCCGGG
GTCTCGATTGGAAGACGCTGCACATGAGCGAGAAGTGGAGGAAGAAGAAG
ACGATGAGGGGGTCAGCGACAACCCATTGCCTGCGTGGATGGAGGGAGAC
TCGCTAGCGCCTCCCTGCCAAGCCGACATGGACGTCGTCCGAGCCATCGT
CGATTTTGCGGGGGTTACCGCGGACGACGTTTTGTACGATCTCGGGTGCG
GAGACGGGCGCATCTGCATTGAGGCCGCCGAAAGCCGGGGGGCCAAGGCT
TGCGGTTTTGTACGATCTCGGGTGCGGAGACGGGCGCATCTGCATTGAGG
CCGCCGAAAGCCGGGGGGCCAAGGCTTGCGGGGTGGAGATCGAGGAAGAC
TTGGCGGACAAGTTCCGACGACGAGTCGCCGCGAAAGGCTTGGAGTCGAA
GGGGTGGAGATCGAGGAAGACTTGGCGGACAAGTTCCGACGACGAGTCGC
CGCGAAAGGCTTGGAGTCGAAGGTATCGGTCGTTCACGGCGACCTACGAG
ATGTCGATCTCTCGGACGCGACGGTGGTGGTGATGTACCTCCTGCCCGAC
GCCATGGCCGACATCGCGCAGTCCCACCTCCTGCCCCTGCTCCGCCGCGG
CCACGGCACCCCCGCAACAACAGCAACATCACCTCTCCCTGGAGACTCGG
CCACACAGAGGGGTACCGCAGGTCGCGAGGAAGCTGTTGTAGAGGGGCGA
ACGGTAGATAGTGAGGGGGCTCCTGGAGTGGACAATCAGGTGGTATCCAC
AGAGAGGGGAAACGAAGAGGGTCGCAGGAGGGGTGATGGTGGTAGTGATG
GTGGTGGGGTGGGTGGCAGTATGAAGCCATGCCGAATTGTATGTAACACG
TGGGGCGTGCCGGGAGCGACTGCGGTGCGGGAGGCAGGGGTGGGGCTCCA
CGGCGGCGTGAAGCTCCGACTCTTCACGCACGCCTCGCTTCCGAGCGTGG
CATGAGTATCGGTCGTTCACGGCGACCTACGAGATGTCGATCTCTCGGAC
GCGACGGTGGTGGTGATGTACCTCCTGCCCGACGCCATGGCCGACATCGC
GCAGTCCCACCTCCTGCCCCTGCTCCGCCGCGGCCACGGCACCCCCGCAA
CAACAGCAACATCACCTCTCCCTGGAGACTCGGCCACACAGAGGGGTACC
GCAGGTCGCGAGGAAGCTGTTGTAGAGGGGCGAACGGTAGATAGTGAGGG
GGCTCCTGGAGTGGACAATCAGGTGGTATCCACAGAGAGGGGAAACGAAG
AGGGTCGCAGGAGGGGTGATGGTGGTAGTGATGGTGGTGGGGTGGGTGGC
AGTATGAAGCCATGCCGAATTGTATGTAACACGTGGGGCGTGCCGGGAGC
GACTGCGGTGCGGGAGGCAGGGGTGGGGCTCCACGGCGGCGTGAAGCTCC
GACTCTTCACGCACGCCTCGCTTCCGAGCGTGGCATGA
back to top