mRNA_E-fasciculatus_F_contig158.3988.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig158.3988.1 vs. uniprot
Match: D7FUC2_ECTSI (Similar to sideroflexin 5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUC2_ECTSI) HSP 1 Score: 646 bits (1666), Expect = 3.410e-227 Identity = 333/344 (96.80%), Postives = 338/344 (98.26%), Query Frame = 1
Query: 112 MGAEFSSAVADAQEVPPFRREGPRYDMSTFVGRTLHFYSVNDPRTLLFTDEDAKSAERLLKLADIGEAPEGTTDADLWHARRVLESALHPDTGEPIFPLFRFSAFVPVNMVIVTATVTPAVISSFPATAFIHFFNQTYNAAINYANRNASNPVPRARLLEGYGGAVVTSLSIGMLSTALTKRVAARAGGAGGPAAAIIRSTLPFLAVAGAGASNVLLMRRNELTTGVDVFDDEGKDLGKSVEAGKMGLMKCAAARVIWNVPVMMFPPIIMSRLERLRLVSSSPRLRMACETAVVTTCLLAAVSPALAFFPQRDSLAVDTLEPKFSGLSDSAGKPVTRVWYNKGL 1143
MGAEFSSAV DAQEVPPFRREGPRYDMSTFVGR LHFYSVNDPRTLLFTDED KSAE+LLKLADIGEAPEGTTDADLWHARRVLESALHPDTGEPIFPLFRFSAFVPVNMVIVTATVTPAVISSFPATAFIHF NQTYNAAINYANRNASNPVPRARL+EGY GAV+TSLSIGMLSTALTKRVAARAGGAGGPAAAIIRSTLPFLAVAGAGASNVLLMRRNELTTGVDVFDDEGKDLGKSVEAGKMGLMKCAAARVIWNVPVMMFPP+IMSRLERLRLVSSSPRLRMACETAVVT+CLLAAVSPALAFFPQRDSL VDTLEPKFSGLSDSAGKPVTRVWYNKGL
Sbjct: 1 MGAEFSSAVTDAQEVPPFRREGPRYDMSTFVGRMLHFYSVNDPRTLLFTDEDTKSAEKLLKLADIGEAPEGTTDADLWHARRVLESALHPDTGEPIFPLFRFSAFVPVNMVIVTATVTPAVISSFPATAFIHFLNQTYNAAINYANRNASNPVPRARLVEGYAGAVITSLSIGMLSTALTKRVAARAGGAGGPAAAIIRSTLPFLAVAGAGASNVLLMRRNELTTGVDVFDDEGKDLGKSVEAGKMGLMKCAAARVIWNVPVMMFPPMIMSRLERLRLVSSSPRLRMACETAVVTSCLLAAVSPALAFFPQRDSLEVDTLEPKFSGLSDSAGKPVTRVWYNKGL 344
BLAST of mRNA_E-fasciculatus_F_contig158.3988.1 vs. uniprot
Match: A0A836CEG4_9STRA (Tricarboxylate carrier-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEG4_9STRA) HSP 1 Score: 409 bits (1051), Expect = 6.830e-131 Identity = 213/344 (61.92%), Postives = 259/344 (75.29%), Query Frame = 1
Query: 112 MGAEFSSAVADAQEVPPFRREGPRYDMSTFVGRTLHFYSVNDPRTLLFTDEDAKSAERLLKLADIGEAPEGTTDADLWHARRVLESALHPDTGEPIFPLFRFSAFVPVNMVIVTATVTPAVISSFPATAFIHFFNQTYNAAINYANRNASNPVPRARLLEGYGGAVVTSLSIGMLSTALTKRVAARAGGAGGPAAAIIRSTLPFLAVAGAGASNVLLMRRNELTTGVDVFDDEGKDLGKSVEAGKMGLMKCAAARVIWNVPVMMFPPIIMSRLERLRLVSSSPRLRMACETAVVTTCLLAAVSPALAFFPQRDSLAVDTLEPKFSGLSDSAGKPVTRVWYNKGL 1143
MGA+ S + A+ PPF E PRYD+ +FVGR+LHFYSVNDPRTLL + +D K++ LL+ G P G D LW ARR++ESA+HPDT +PI P RFSAFVP+NM IVTAT+ PAVI SF AT IH NQTYNAAINYANRNASNPV RL+EGY GAV TSL+IG+ +TALT+R + A G +IRSTLPFLA AGAG +NV LMRRNEL GVD+FD EG GKS AG+ G+ KCAAAR+IWNVP+MMFPP++M+ LER + +PRL+MA E V+T+CLL AVSP+LA FPQRD+L +TLEP+F GL+DSAG+PVT ++YNKGL
Sbjct: 244 MGADLSKQLKAAEATPPFSLEKPRYDLDSFVGRSLHFYSVNDPRTLLCSSDDLKASMALLESYKAGTLPAGIGDQQLWAARRLIESAIHPDTKQPIPPYLRFSAFVPINMFIVTATLAPAVIGSFAATGCIHLVNQTYNAAINYANRNASNPVSTQRLMEGYAGAVATSLTIGLSATALTRRASRWTPLAAG----LIRSTLPFLATAGAGFANVALMRRNELVEGVDMFDAEGNMRGKSKIAGQTGIAKCAAARLIWNVPIMMFPPLLMTHLERTGPLRRNPRLKMAVEVGVITSCLLGAVSPSLAVFPQRDALRAETLEPEFRGLTDSAGRPVTTLYYNKGL 583
BLAST of mRNA_E-fasciculatus_F_contig158.3988.1 vs. uniprot
Match: F2UI50_SALR5 (Sideroflexin 5 n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UI50_SALR5) HSP 1 Score: 273 bits (698), Expect = 6.550e-82 Identity = 148/336 (44.05%), Postives = 211/336 (62.80%), Query Frame = 1
Query: 142 DAQEVPPFRREGP-RYDMSTFVGRTLHFYSVNDPRTLLFTDEDAKSAERLLKLADIGEAPEGTTDADLWHARRVLESALHPDTGEPIFPLFRFSAFVPVNMVIVTATVTPAVISSFPATAFIHFFNQTYNAAINYANRNASNPVPRARLLEGYGGAVVTSLSIGMLSTALTKRVAARAGGAGGPA-AAIIRSTLPFLAVAGAGASNVLLMRRNELTTGVDVFDDEGKDLGKSVEAGKMGLMKCAAARVIWNVPVMMFPPIIMSRLERLRLVSSSPRLRMACETAVVTTCLLAAVSPALAFFPQRDSLAVDTLEPKFSGLSDSAGKPVTRVWYNKGL 1143
D + +PPF P R+D+ST++GR HFY+ DP TLL++ A+ L++ G T+ LW AR++ +SALHPDTGE IFPLFRFSAF P N+ I + P F TA F NQTYN +NYANRNAS+ + + LL YG AV +S + + +++ +AARAGG+ P A R+ +P+LAV GAG N+L +R+ E + GV V+ + G+DLGKSV AG+ L KC+ R +W +P+ PP+IMS +++++++ +PRLR E V+ + V PALA +PQRDSL V +E +F L D +GKP+ RV++NKGL
Sbjct: 4 DKESMPPFSLAAPSRFDLSTYLGRVKHFYNTTDPSTLLYSKSKIMEAKALMESFKHGTVDPSVTNTQLWKARKLCDSALHPDTGELIFPLFRFSAFAPANIPIAAMLLYPTANPYFIITA--QFINQTYNVCVNYANRNASSNMSTSTLLTAYGAAVTSSCGLALGFGKISRMLAARAGGSPSPLMVAAQRAVVPYLAVVGAGIVNLLCIRQTEFSEGVTVYSEGGEDLGKSVVAGRDALKKCSIVRALWCIPICC-PPLIMSLVDKVKVIRQNPRLRFIAELVVIGASVGFGVPPALAAYPQRDSLPVTAIESRFHNLIDESGKPIDRVYFNKGL 336
BLAST of mRNA_E-fasciculatus_F_contig158.3988.1 vs. uniprot
Match: A0A3P3YBD5_PLABS (Sidoreflexin n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YBD5_PLABS) HSP 1 Score: 244 bits (623), Expect = 5.220e-71 Identity = 134/333 (40.24%), Postives = 200/333 (60.06%), Query Frame = 1
Query: 154 VPPFRREGPRYDMSTFVGRTLHFYSVNDPRTLLFTDED-AKSAERLLKLADIGEAPEGTTDADLWHARRVLESALHPDTGEPIFPLFRFSAFVPVNMVIVTATVTPAVISSFPATAFIHFFNQTYNAAINYANRNASNPVPRARLLEGYGGAVVTS--LSIGMLSTALTKRVAARAGGAGGPAAAIIRSTLPFLAVAGAGASNVLLMRRNELTTGVDVFDDEGKDLGKSVEAGKMGLMKCAAARVIWNVPVMMFPPIIMSRLERLRLVSSSPRLRMACETAVVTTCLLAAVSPALAFFPQRDSLAVDTLEPKFSGLSDSAGKPVTRVWYNKGL 1143
+P F E PRYD ST++GR F + +PRTL +D + A +A + + D+G AP G ++ +W AR LE+ +HPDTG+PI LFRFSAFVPVN+ I +T ++ T F + NQ+YN A+N+ANRNASNP+ ++++ Y A +S+G+ A + +++ PF+AVA AG NV LMR NEL G+++ D+EG+ +GKS +AG+ L + A RV P+++ PPII++ L + +++ +S R R+ E +VT CL AAV A+ FPQ ++ +EP+F GL DS G+PVT +NKGL
Sbjct: 15 IPAFSLERPRYDQSTYMGRVRKFIDIINPRTLFTSDAELAHAAGLIAQFRDLGGAPPGVSNEQMWAARSTLEAIVHPDTGKPIPLLFRFSAFVPVNLPICVGMLTT---NTVVGTVFWQWVNQSYNVAVNHANRNASNPMSNEQIMKAYAAAXXXXXXISVGLNQIAQVANLR------------LLKQFTPFVAVASAGVLNVTLMRYNELQEGIEIKDEEGRIVGKSKQAGRAALTQVALTRVALPAPILVLPPIIINLLNKAKMMPASKRARLVVEVGIVTACLAAAVPLAIGLFPQTGAIRAQDVEPEFQGLKDSKGRPVTSFSFNKGL 332
BLAST of mRNA_E-fasciculatus_F_contig158.3988.1 vs. uniprot
Match: A0A0D2UFK2_CAPO3 (Sidoreflexin n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UFK2_CAPO3) HSP 1 Score: 232 bits (591), Expect = 2.340e-66 Identity = 137/339 (40.41%), Postives = 191/339 (56.34%), Query Frame = 1
Query: 145 AQEVPPFRREGPRYDMSTFVGRTLHFYSVNDPRTLLFTDEDAKSAERLLKLADIGEAPEG----TTDADLWHARRVLESALHPDTGEPIFPLFRFSAFVPVNMVIVTATVT--PAVISSFPATAFIHFFNQTYNAAINYANRNASNPVPRARLLEGYGGAVVTSLSIGMLSTALTKRVAARAGGAGGPAAAIIRSTLPFLAVAGAGASNVLLMRRNELTTGVDVFDDEGKDLGKSVEAGKMGLMKCAAARVIWNVPVMMFPPIIMSRLERLRLVSSSPRLRMACETAVVTTCLLAAVSPALAFFPQRDSLAVDTLEPKFSGLSDSAGKPVTRVWYNKGL 1143
+ EVP F + PRYD S F GR HF+ + DP LL +D K + LL G+ G TDA +W ARR+ E+ LHPDT EPI +FR SAFVP N+ I+ + P V++ T + NQT+NA NY+NRNA+ P A + YG A S+ + L KR G ++R+ +PF+AVA AG +N+ LMRR E TG+DV D EG +G+S EAGK+ L + A RV+ VP+++ PP+IMS L R + S+PR+RMA E V+ + A+ A+A FPQ + LE +F + G P+T ++YNKG+
Sbjct: 3 SSEVPKFTLDKPRYDQSAFSGRVRHFFDLVDPMLLLTSDAKLKESVDLLAAFKAGKINPGQPGQVTDAQMWEARRIKEAILHPDTNEPIPAVFRMSAFVPANVPIIAGMLMSPPTVLN----TVMWQWINQTFNAGFNYSNRNANAPQSTAEIATAYGAASAISVGTAVGLGELVKRATNLPPAVRG----VVRTVVPFVAVASAGVANMYLMRRGEAETGIDVRDSEGNLVGRSQEAGKICLKQVAVTRVLLPVPILILPPVIMSGLNRTAFLKSNPRVRMAVEVGVIAGAIWGALPLAIATFPQVMPVETSKLETRFHQMRTPKGDPITTLYYNKGV 333
BLAST of mRNA_E-fasciculatus_F_contig158.3988.1 vs. uniprot
Match: K1RJ31_CRAGI (Sidoreflexin n=3 Tax=Crassostrea TaxID=6564 RepID=K1RJ31_CRAGI) HSP 1 Score: 225 bits (574), Expect = 4.930e-64 Identity = 137/332 (41.27%), Postives = 189/332 (56.93%), Query Frame = 1
Query: 151 EVPPFRREGPRYDMSTFVGRTLHFYSVNDPRTLLFTDEDAKSAERLLKLADIGEAPEGTTDADLWHARRVLESALHPDTGEPIFPLFRFSAFVPVNMVIVTATVTPAVISSFPATAFIHFFNQTYNAAINYANRNASNPVPRARLLEGYGGAVVTSLSIGMLSTALTKRVAARAGGAGGPAAAI-IRSTLPFLAVAGAGASNVLLMRRNELTTGVDVFDDEGKDLGKSVEAGKMGLMKCAAARVIWNVPVMMFPPIIMSRLERLRLVSSSPRLRMACETAVVTTCLLAAVSPALAFFPQRDSLAVDTLEPKFSGLSDSAGKPVTRVWYNKGL 1143
E PPFR RYD STF GR HF+ V DPRTL ++E KS +LL G P T+ DLW A+++ ++ +HPDTGE IF FR S FVP +V + P + +T F + NQ++NA +NYANRNA++P P +R L GY GAV T++SI + L ++ + PA + I+ +PF AVA A N+LLMR +EL+TG++V D G +GKS A K LM+ A R+ P+++ PPIIMS LE+ PR+ + AVVT C A+ A+A FPQ + +LEP+ L+ T + YNKGL
Sbjct: 4 EYPPFRLGKSRYDQSTFDGRLRHFFDVIDPRTLFTSEEKLKSCVKLLDDFSKGHLPPTVTNKDLWEAQKIKQAIIHPDTGEKIFMPFRMSGFVPFGSPMVVGLLLPN--QTIASTIFWQWINQSHNACVNYANRNATSPTPMSRFLLGYTGAVSTAVSIAVGLNLLIQKANKFS-----PATKVLIQRFVPFPAVACASTCNLLLMRNSELSTGIEVEDHNGNVIGKSKVAAKKALMETAITRMFLPAPILVIPPIIMSLLEKTAFFKRYPRVHLPVHAAVVTVCFGLALPVAIAIFPQYSKVDTASLEPEIQKLTKD-----TTLIYNKGL 323
BLAST of mRNA_E-fasciculatus_F_contig158.3988.1 vs. uniprot
Match: A0A024UIH5_9STRA (Sidoreflexin n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024UIH5_9STRA) HSP 1 Score: 225 bits (574), Expect = 1.530e-63 Identity = 138/351 (39.32%), Postives = 195/351 (55.56%), Query Frame = 1
Query: 97 HPPTTMGAEFSSAVADAQEVPPFRREGPRYDMSTFVGRTLHFYSVNDPRTLLFTDEDAKSAERLLKLADIGE-APEGTTDADLWHARRVLESALHPDTGEPIFPLFRFSAFVPVNMVIVTATV-TPAVISSFPATAFIHFFNQTYNAAINYANRNASNPVPRARLLEGYGGAVVTSLSIGMLSTALTKRVAARAGGAGGPAAAIIRSTLPFLAVAGAGASNVLLMRRNELTTGVDVFDDEGKDLGKSVEAGKMGLMKCAAARVIWNVPVMMFPPIIMSRLERLRLVSSSPRLRMACETAVVTTCLLAAVSPALAFFPQRDSLAVDTLEPKFSGLSDSAGKPVTRVWYNKGL 1143
H T+G S DA PPF + PRYD ST+ GR HF + P + L +D++ ++ L+ G+ AP DADLW ARR++E+ HP TGE + LFR AFVPVN+ I + + P + + T F + NQ+YNA NYANRNAS + + Y AV S + S L K V A +++ T+PF+AVA AGA N + MR NELT G+D+ DDEG G+S EAGK L + A RV +P+++FPP I+ ++ + + + R+ E +VVT C+ A A+A FPQ S+ +EP+F GL +S G+P+T YNKG+
Sbjct: 22 HTQLTIGR--SRMTTDAT-TPPFSLDKPRYDQSTYFGRWKHFSELVSPSSFLLSDDEITKSKDLIDNVKSGKVAPGQVPDADLWKARRIVETVFHPQTGEKLPALFRMPAFVPVNIPICSGMILAPPTLFN---TVFWQWINQSYNAGFNYANRNASGVDDTTAIAKAYASAVAISCAT---SVGLGKAVE-HASFLAPTVRSVLSKTVPFVAVAAAGAGNAVFMRLNELTDGIDILDDEGVPRGRSQEAGKQSLTQVALTRVALPMPILLFPPFILEVMKTAKALPKNRFGRVFTEISVVTLCIWGAFPAAIALFPQYGSIPATQVEPQFRGLKNSKGQPITEFTYNKGI 362
BLAST of mRNA_E-fasciculatus_F_contig158.3988.1 vs. uniprot
Match: A0A0H5R959_9EUKA (Sidoreflexin n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R959_9EUKA) HSP 1 Score: 221 bits (562), Expect = 2.210e-62 Identity = 130/329 (39.51%), Postives = 187/329 (56.84%), Query Frame = 1
Query: 160 PFRREGPRYDMSTFVGRTLHFYSVNDPRTLLFTDEDAKSAE-RLLKLADIGEAPEGTTDADLWHARRVLESALHPDTGEPIFPLFRFSAFVPVNMVIVTATVTPAVISSFPATAFIHFFNQTYNAAINYANRNASNPVPRARLLEGYGGAVVTSLSIGMLSTALTKRVAARAGGAGGPAAAIIRSTLPFLAVAGAGASNVLLMRRNELTTGVDVFDDEGKDLGKSVEAGKMGLMKCAAARVIWNVPVMMFPPIIMSRLERLRLVSSSPRLRMACETAVVTTCLLAAVSPALAFFPQRDSLAVDTLEPKFSGLSDSAGKPVTRVWYNKGL 1143
PF RYD +T++GR F + +PR L ++E + +L + G+A +D LW AR V+E+ +HPDTG+PI LFRFSAFVPVN+ I +T + P T F + NQ+YN A+N++NRNASN + ++L+ Y GAV+ S SI + + KR + ++ PF+AVA AGA NV+LMRRNEL G+++ D EG GKS AG+ L + A P+++ PPIIM+ L+ R++ + ++ ET VVT CL AV A+ FPQ ++V LE +F + DS G V+ YNKGL
Sbjct: 6 PFSLSRDRYDQATYLGRVKKFIDIINPRNLFVSEEQLSGCKAKLQQFEKTGDA----SDQSLWEARSVVEAVVHPDTGKPIPILFRFSAFVPVNLPICVGMLTTTTV---PGTIFWQWVNQSYNVAVNHSNRNASNAMSNEQILKAYTGAVLASCSISVGLNQIAKRANMK----------LLGQFTPFIAVATAGALNVVLMRRNELDQGIEIKDSEGNVCGKSKAAGRAALTQVAXXXXXLPAPILIIPPIIMNALKNARMIPTGRYGKLIVETGVVTACLAMAVPLAIGIFPQTGIISVQDLEEEFQNVRDSKGDRVSVFTYNKGL 317
BLAST of mRNA_E-fasciculatus_F_contig158.3988.1 vs. uniprot
Match: A0A068SCC4_9FUNG (Sidoreflexin n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068SCC4_9FUNG) HSP 1 Score: 219 bits (558), Expect = 9.340e-62 Identity = 126/325 (38.77%), Postives = 187/325 (57.54%), Query Frame = 1
Query: 178 PRYDMSTFVGRTLHFYSVNDPRTLLFTDEDAKSAERLLKLADIGEAPEGTTDAD-LWHARRVLESALHPDTGEPIFPLFRFSAFVPVNMVIVTATVTPAVISSFPATAFIHFFNQTYNAAINYANRNASNPVPRARLLEGYGGAVVTS--LSIGMLSTALTKRVAARAGGAGGPAAAIIRSTLPFLAVAGAGASNVLLMRRNELTTGVDVFDDEGKDLGKSVEAGKMGLMKCAAARVIWNVPVMMFPPIIMSRLERLRLVSSSPRLRMACETAVVTTCLLAAVSPALAFFPQRDSLAVDTLEPKFSGLSDSAGKPVTRVWYNKGL 1143
PRY ST++GR HF V D RTL +++ + A++LL D + P+ DA+ LW A++V++S LHPDTGE I FR S+FVP NM++V +TP S F + NQ+ N A N AN N S P+ Y AV TS L++G+ + R+A I+ +PF AVA AG NV LMR E+T G+DV+ ++ + +GKS +AG + + A +RV+ N P ++ PP+ + RL++ V + P+L + ++ C+ A+ A+A FPQ SL +EP+F L+DS GKP+TR++YNKGL
Sbjct: 8 PRYPQSTYLGRLRHFVDVTDVRTLFASNKQLEEAKKLLN--DYKQNPQMKVDAERLWGAKKVVDSTLHPDTGEKILLPFRMSSFVPTNMILVAGMLTPN--PSIKNIIFWQWANQSVNVAFNSANANKSTPLNLKETAVAYASAVTTSCALAVGLTQSVPRLRIA-------DATKRILMKLVPFTAVATAGTVNVFLMRGKEITNGIDVYTEDNEKVGKSKKAGLSAVSQVAISRVLTNAPALVIPPLALDRLKQTEFVKARPKLVLPLNFGLIAFCMFTALPAAIAVFPQISSLETSDMEPEFQNLTDSNGKPITRLYYNKGL 321
BLAST of mRNA_E-fasciculatus_F_contig158.3988.1 vs. uniprot
Match: A0A1S3J6H4_LINUN (Sidoreflexin n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3J6H4_LINUN) HSP 1 Score: 218 bits (554), Expect = 4.980e-61 Identity = 127/345 (36.81%), Postives = 197/345 (57.10%), Query Frame = 1
Query: 112 MGAEFSSAVADAQEVPPFRREGPRYDMSTFVGRTLHFYSVNDPRTLLFTDEDAKSAERLLKLADIGEAPEGTTDADLWHARRVLESALHPDTGEPIFPLFRFSAFVPVNMVIVTATVTPAVISSFPATAFIHFFNQTYNAAINYANRNASNPVPRARLLEGYGGAVVTSLSIGMLSTALTKRVAARAGGAGGPAAAI-IRSTLPFLAVAGAGASNVLLMRRNELTTGVDVFDDEGKDLGKSVEAGKMGLMKCAAARVIWNVPVMMFPPIIMSRLERLRLVSSSPRLRMACETAVVTTCLLAAVSPALAFFPQRDSLAVDTLEPKFSGLSDSAGKPVTRVWYNKGL 1143
M ++ D+ PPFR R+D +TF GR HF V DP+TL +++ K + +LL+ G+ P ++ +LW A+++ ++ +HPDTGE IF FR S FVP IV + P + AT F + NQ++NA +NY+NRNA+ P P +R L GYG AV ++++I + + KR A P+ + I+ +PF AVA A NV+ MR NEL+ G++V D EG+ +G S A K L++ A R + P+++ PP++M++LE+ + + + PR + AVVT C A+ A+A FPQ ++ LE K L ++ +P V+YNKGL
Sbjct: 1 MATSGANLQLDSDGFPPFRLNESRFDQNTFSGRLRHFLDVVDPKTLFTSNQRLKESCQLLQDFQNGKLPPSISNKELWEAQKIKQAIIHPDTGEKIFMPFRMSGFVPFGSPIVVGLLLPN--PTIKATIFWQWLNQSHNACVNYSNRNATKPTPISRFLLGYGAAVGSAVTIAVSLGVMIKRANALT-----PSMKLLIQRFVPFPAVATASVCNVICMRNNELSEGIEVMDKEGRIVGTSQIAAKKALLETAMTRAVLPAPILIIPPVVMTQLEKTKFLQTRPRFHLPIHAAVVTACFGFALPVAIALFPQFSQISTKDLEAK---LQEATSEPA--VYYNKGL 333 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig158.3988.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig158.3988.1 >prot_E-fasciculatus_F_contig158.3988.1 ID=prot_E-fasciculatus_F_contig158.3988.1|Name=mRNA_E-fasciculatus_F_contig158.3988.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=345bp MGAEFSSAVADAQEVPPFRREGPRYDMSTFVGRTLHFYSVNDPRTLLFTDback to top mRNA from alignment at E-fasciculatus_F_contig158:2271..6850+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig158.3988.1 ID=mRNA_E-fasciculatus_F_contig158.3988.1|Name=mRNA_E-fasciculatus_F_contig158.3988.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4580bp|location=Sequence derived from alignment at E-fasciculatus_F_contig158:2271..6850+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig158:2271..6850+ >mRNA_E-fasciculatus_F_contig158.3988.1 ID=mRNA_E-fasciculatus_F_contig158.3988.1|Name=mRNA_E-fasciculatus_F_contig158.3988.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2070bp|location=Sequence derived from alignment at E-fasciculatus_F_contig158:2271..6850+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |