prot_E-fasciculatus_F_contig10496.398.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10496.398.1
Unique Nameprot_E-fasciculatus_F_contig10496.398.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length275
Homology
BLAST of mRNA_E-fasciculatus_F_contig10496.398.1 vs. uniprot
Match: D8LRZ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRZ0_ECTSI)

HSP 1 Score: 431 bits (1109), Expect = 5.370e-142
Identity = 235/276 (85.14%), Postives = 242/276 (87.68%), Query Frame = 0
Query:    1 PHPSRHLAELRAGLAKFEMRGGDLEAAVAHAEAALAEHPACGDAFLIRGQCRRELGDNSGALSDLVNAFVLQGNALNNAGDGSEAQAIEDVSRESCRERAGEEFSQRAAPNALPADWVVRSFLTSYDTEGLYEEHDAVLRLHGEDP-AAAAEAEGDEGGQAAAAVAEFWRGLSLVREGKYAESIAKXXXXXXXXXXXXXXASEEAVLGEGEGAGAGDTTRIRSLALEYYGSFLYLMGDMDTALEHLRRAGEVDETNVKSWVKRGSVLSDLGRREEA 275
            P PSRHLAELRAGLAK EMRGGDLEAA+AHAEAALAEHPACG+AFLIRGQCRRELGDN GAL DLVNAFVLQGNALNNAGDGSEAQAIEDVSRESCR RAGEEFSQRAAPNALPADWVVRSFLTSYDT+GLYEEHDAV RLHGEDP AAAA AEGDEGGQAAA V EFW+GLSLVREGKYAESIAK              +S   V   GEG GAGDTTRI+SLALEY GSFLYLMGDM+TALEHLR AGEVDETN KSWVKRGSVLSDLGRREEA
Sbjct:  424 PRPSRHLAELRAGLAKCEMRGGDLEAAIAHAEAALAEHPACGEAFLIRGQCRRELGDNGGALRDLVNAFVLQGNALNNAGDGSEAQAIEDVSRESCRARAGEEFSQRAAPNALPADWVVRSFLTSYDTKGLYEEHDAVFRLHGEDPVAAAAAAEGDEGGQAAA-VTEFWQGLSLVREGKYAESIAKFSSSVSAF------SSSAPVAVLGEGTGAGDTTRIQSLALEYCGSFLYLMGDMNTALEHLRLAGEVDETNAKSWVKRGSVLSDLGRREEA 692          
BLAST of mRNA_E-fasciculatus_F_contig10496.398.1 vs. uniprot
Match: A0A397DXQ1_9STRA (Uncharacterized protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DXQ1_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.160e-6
Identity = 74/293 (25.26%), Postives = 124/293 (42.32%), Query Frame = 0
Query:    3 PSRHLAELRA--GLAKFEMRGGDLEAAVAHAEAALAEHPACGDAFLIRGQCRRELGDNSGALSDLVNAFVLQGNALNNAGDGSEAQAIEDVSRESCRERAGEEFSQRAAPNALPADWVVRSFLTSYDTEGLYEEHDAVLRLHGEDPAAAAEAEGDEGGQAAAAVAEF----WRGLSLVREGKYAESIAKXXXXXXXXXXXXXXASEEAVLGEGEGAGAGDTTRIRS--------------LALEYYGSFLYLMGDMDTALEHLRRAGEVDETNVKSWVKRGSVLSDLGRREEA 275
            P  H A + A    AK  +R   LE A A  + AL   P C DA+ ++G    +  D + AL   V AF+L G+   +      A+ IE VS+   R++A   ++  A  + LP+ W+V S+  S+  +         ++   +   A +    D+         +F     + +   R  +YA++ A                 E   L +    GA  TT   S              +AL ++ +FLY+ GD+++AL  +  A  +D+T++ S VK+   L +LG  E A
Sbjct:  615 PVNHTAVVEALTKRAKCYVRTNRLELAAADCKLALDLSPYCADAYAVKGAIDEQHKDFNLALQHHVLAFILGGSRQLDV-----AEVIERVSKLVGRDQAKSVWANMAKRHELPSSWLVDSYFLSFSRDADAGVSTVHVKSQSKSDDAVSNVLNDD---------QFDDLLVQAIDHKRSKRYAQAQALFATLAAYVSTTTTTDDEPENL-DNVLDGASTTTXSTSTAKKAFKTKRDRHVIALNFHATFLYIAGDVESALAVIDEALALDDTHLNSVVKKAGFLCELGEFEAA 892          
BLAST of mRNA_E-fasciculatus_F_contig10496.398.1 vs. uniprot
Match: A0A6G0WLP0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WLP0_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 5.280e-5
Identity = 64/251 (25.50%), Postives = 105/251 (41.83%), Query Frame = 0
Query:   25 EAAVAHAEAALAEHPACGDAFLIRGQCRRELGDNSGALSDLVNAFVLQGNALNNAGDGSEAQAIEDVSRESCRERAGEEFSQRAAPNALPADWVVRSFLTSYDTEGLYEEHDAVLRLHGEDPAAAAEAEGDEGGQAAAAVAEFWRGLSLVREGKYAESIAKXXXXXXXXXXXXXXASEEAVLGEGEGAGAGDTTRIRSLALEYYGSFLYLMGDMDTALEHLRRAGEVDETNVKSWVKRGSVLSDLGRREEA 275
            E A A    AL   P C +A+  +G       +   AL + V AF+L G+ +       +A+ IE VS+   RE+A + +S     + LP+ W++ S+  S+  +      D+ + + G       +   D           F R +   R  +Y E+                   E   +GE +            +AL  + +FLY+ GD+ TAL+ +  A  +D T+V S VK+   L +LG  EEA
Sbjct:  621 EEAQADCTLALKISPFCLEAYACQGDLAESNREYEKALQNHVLAFILGGSRVI-----EQAEVIERVSKFVGREQAKDIWSAMIKRHDLPSKWLIDSYFNSFQRDA-----DSGISIRGLTKKEVVDVHDD-------FEQYFLRAIDHKRNQRYHEA-------QQHFEALSKYIQENPEVGELKNC---------VVALNLHATFLYITGDVATALDVINVALTLDPTHVNSVVKKAGFLCELGEFEEA 838          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10496.398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LRZ0_ECTSI5.370e-14285.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A397DXQ1_9STRA2.160e-625.26Uncharacterized protein n=10 Tax=Aphanomyces astac... [more]
A0A6G0WLP0_9STRA5.280e-525.50Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 8..41
e-value: 26.0
score: 11.2
coord: 222..255
e-value: 45.0
score: 9.2
coord: 42..75
e-value: 140.0
score: 5.0
coord: 163..196
e-value: 360.0
score: 1.3
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 8..41
score: 5.517
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 222..255
score: 8.496
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 163..196
score: 5.045
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 85..275
e-value: 1.8E-11
score: 45.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 3..84
e-value: 1.0E-6
score: 30.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 6..275
NoneNo IPR availablePFAMPF13432TPR_16coord: 19..69
e-value: 7.0E-7
score: 29.8
NoneNo IPR availablePANTHERPTHR46208FAMILY NOT NAMEDcoord: 25..275
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 8..75
score: 8.385
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 222..275
score: 13.269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10496contigE-fasciculatus_F_contig10496:2061..4793 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10496.398.1mRNA_E-fasciculatus_F_contig10496.398.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10496 2060..4793 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10496.398.1 ID=prot_E-fasciculatus_F_contig10496.398.1|Name=mRNA_E-fasciculatus_F_contig10496.398.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=275bp
PHPSRHLAELRAGLAKFEMRGGDLEAAVAHAEAALAEHPACGDAFLIRGQ
CRRELGDNSGALSDLVNAFVLQGNALNNAGDGSEAQAIEDVSRESCRERA
GEEFSQRAAPNALPADWVVRSFLTSYDTEGLYEEHDAVLRLHGEDPAAAA
EAEGDEGGQAAAAVAEFWRGLSLVREGKYAESIAKFSSSVSAFSSSAPAA
SEEAVLGEGEGAGAGDTTRIRSLALEYYGSFLYLMGDMDTALEHLRRAGE
VDETNVKSWVKRGSVLSDLGRREEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat