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Homology
BLAST of mRNA_E-fasciculatus_F_contig10496.398.1 vs. uniprot
Match: D8LRZ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRZ0_ECTSI) HSP 1 Score: 431 bits (1109), Expect = 5.370e-142 Identity = 235/276 (85.14%), Postives = 242/276 (87.68%), Query Frame = 1
Query: 1 PHPSRHLAELRAGLAKFEMRGGDLEAAVAHAEAALAEHPACGDAFLIRGQCRRELGDNSGALSDLVNAFVLQGNALNNAGDGSEAQAIEDVSRESCRERAGEEFSQRAAPNALPADWVVRSFLTSYDTEGLYEEHDAVLRLHGEDP-AAAAEAEGDEGGQAAAAVAEFWRGLSLVREGKYAESIAKXXXXXXXXXXXXXXASEEAVLGEGEGAGAGDTTRIRSLALEYYGSFLYLMGDMDTALEHLRRAGEVDETNVKSWVKRGSVLSDLGRREEA 825
P PSRHLAELRAGLAK EMRGGDLEAA+AHAEAALAEHPACG+AFLIRGQCRRELGDN GAL DLVNAFVLQGNALNNAGDGSEAQAIEDVSRESCR RAGEEFSQRAAPNALPADWVVRSFLTSYDT+GLYEEHDAV RLHGEDP AAAA AEGDEGGQAAA V EFW+GLSLVREGKYAESIAK +S V GEG GAGDTTRI+SLALEY GSFLYLMGDM+TALEHLR AGEVDETN KSWVKRGSVLSDLGRREEA
Sbjct: 424 PRPSRHLAELRAGLAKCEMRGGDLEAAIAHAEAALAEHPACGEAFLIRGQCRRELGDNGGALRDLVNAFVLQGNALNNAGDGSEAQAIEDVSRESCRARAGEEFSQRAAPNALPADWVVRSFLTSYDTKGLYEEHDAVFRLHGEDPVAAAAAAEGDEGGQAAA-VTEFWQGLSLVREGKYAESIAKFSSSVSAF------SSSAPVAVLGEGTGAGDTTRIQSLALEYCGSFLYLMGDMNTALEHLRLAGEVDETNAKSWVKRGSVLSDLGRREEA 692
BLAST of mRNA_E-fasciculatus_F_contig10496.398.1 vs. uniprot
Match: A0A397DXQ1_9STRA (Uncharacterized protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DXQ1_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 2.160e-6 Identity = 74/293 (25.26%), Postives = 124/293 (42.32%), Query Frame = 1
Query: 7 PSRHLAELRA--GLAKFEMRGGDLEAAVAHAEAALAEHPACGDAFLIRGQCRRELGDNSGALSDLVNAFVLQGNALNNAGDGSEAQAIEDVSRESCRERAGEEFSQRAAPNALPADWVVRSFLTSYDTEGLYEEHDAVLRLHGEDPAAAAEAEGDEGGQAAAAVAEF----WRGLSLVREGKYAESIAKXXXXXXXXXXXXXXASEEAVLGEGEGAGAGDTTRIRS--------------LALEYYGSFLYLMGDMDTALEHLRRAGEVDETNVKSWVKRGSVLSDLGRREEA 825
P H A + A AK +R LE A A + AL P C DA+ ++G + D + AL V AF+L G+ + A+ IE VS+ R++A ++ A + LP+ W+V S+ S+ + ++ + A + D+ +F + + R +YA++ A E L + GA TT S +AL ++ +FLY+ GD+++AL + A +D+T++ S VK+ L +LG E A
Sbjct: 615 PVNHTAVVEALTKRAKCYVRTNRLELAAADCKLALDLSPYCADAYAVKGAIDEQHKDFNLALQHHVLAFILGGSRQLDV-----AEVIERVSKLVGRDQAKSVWANMAKRHELPSSWLVDSYFLSFSRDADAGVSTVHVKSQSKSDDAVSNVLNDD---------QFDDLLVQAIDHKRSKRYAQAQALFATLAAYVSTTTTTDDEPENL-DNVLDGASTTTXSTSTAKKAFKTKRDRHVIALNFHATFLYIAGDVESALAVIDEALALDDTHLNSVVKKAGFLCELGEFEAA 892
BLAST of mRNA_E-fasciculatus_F_contig10496.398.1 vs. uniprot
Match: A0A6G0WLP0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WLP0_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 5.280e-5 Identity = 64/251 (25.50%), Postives = 105/251 (41.83%), Query Frame = 1
Query: 73 EAAVAHAEAALAEHPACGDAFLIRGQCRRELGDNSGALSDLVNAFVLQGNALNNAGDGSEAQAIEDVSRESCRERAGEEFSQRAAPNALPADWVVRSFLTSYDTEGLYEEHDAVLRLHGEDPAAAAEAEGDEGGQAAAAVAEFWRGLSLVREGKYAESIAKXXXXXXXXXXXXXXASEEAVLGEGEGAGAGDTTRIRSLALEYYGSFLYLMGDMDTALEHLRRAGEVDETNVKSWVKRGSVLSDLGRREEA 825
E A A AL P C +A+ +G + AL + V AF+L G+ + +A+ IE VS+ RE+A + +S + LP+ W++ S+ S+ + D+ + + G + D F R + R +Y E+ E +GE + +AL + +FLY+ GD+ TAL+ + A +D T+V S VK+ L +LG EEA
Sbjct: 621 EEAQADCTLALKISPFCLEAYACQGDLAESNREYEKALQNHVLAFILGGSRVI-----EQAEVIERVSKFVGREQAKDIWSAMIKRHDLPSKWLIDSYFNSFQRDA-----DSGISIRGLTKKEVVDVHDD-------FEQYFLRAIDHKRNQRYHEA-------QQHFEALSKYIQENPEVGELKNC---------VVALNLHATFLYITGDVATALDVINVALTLDPTHVNSVVKKAGFLCELGEFEEA 838
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 433.0 |
| Seed ortholog evalue | 1.1e-118 |
| Seed eggNOG ortholog | 2880.D8LRZ0 |
| Preferred name | TOMM70A |
| KEGG ko | ko:K00738,ko:K17768 |
| KEGG TC | 3.A.8.1 |
| KEGG Reaction | R05987 |
| KEGG Pathway | ko00510,ko00513,ko01100,map00510,map00513,map01100 |
| KEGG Module | M00075 |
| GOs | GO:0001101,GO:0001558,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005742,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0010243,GO:0010611,GO:0010614,GO:0010721,GO:0014070,GO:0014741,GO:0014743,GO:0015031,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016202,GO:0017038,GO:0019867,GO:0022804,GO:0022857,GO:0022884,GO:0030150,GO:0030308,GO:0030943,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031306,GO:0031307,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0032592,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0040008,GO:0042221,GO:0042277,GO:0042493,GO:0042886,GO:0042887,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043502,GO:0044057,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044743,GO:0045039,GO:0045184,GO:0045595,GO:0045596,GO:0045843,GO:0045926,GO:0046620,GO:0046621,GO:0046907,GO:0048518,GO:0048519,GO:0048523,GO:0048583,GO:0048634,GO:0048635,GO:0048638,GO:0048640,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051093,GO:0051128,GO:0051147,GO:0051148,GO:0051153,GO:0051154,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051241,GO:0051641,GO:0051649,GO:0055021,GO:0055022,GO:0055024,GO:0055026,GO:0055085,GO:0060284,GO:0060420,GO:0061024,GO:0061050,GO:0061052,GO:0061117,GO:0065002,GO:0065007,GO:0070201,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072655,GO:0072657,GO:0090087,GO:0090150,GO:0090151,GO:0090257,GO:0097066,GO:0097068,GO:0098573,GO:0098588,GO:0098796,GO:0098798,GO:0098799,GO:0098805,GO:1901698,GO:1901700,GO:1901861,GO:1901862,GO:1904386,GO:1904589,GO:1904591,GO:1904680,GO:1904951,GO:1905207,GO:1905208,GO:1990542,GO:2000026,GO:2000725,GO:2000726 |
| EggNOG free text desc. | protein transmembrane transport |
| EggNOG OGs | KOG0547@1,KOG0547@2759 |
| EC | 2.4.1.145 |
| COG Functional cat. | S |
| CAZy | GT54 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01003,ko02000,ko03029 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Mitochondrial import receptor, Tom70 homolog |
| Ec32 ortholog | Ec-08_001370.1 |
| Exons | 4 |
| Model size | 826 |
| Cds size | 825 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10496.398.1 >prot_E-fasciculatus_F_contig10496.398.1 ID=prot_E-fasciculatus_F_contig10496.398.1|Name=mRNA_E-fasciculatus_F_contig10496.398.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=275bp
PHPSRHLAELRAGLAKFEMRGGDLEAAVAHAEAALAEHPACGDAFLIRGQ CRRELGDNSGALSDLVNAFVLQGNALNNAGDGSEAQAIEDVSRESCRERA GEEFSQRAAPNALPADWVVRSFLTSYDTEGLYEEHDAVLRLHGEDPAAAA EAEGDEGGQAAAAVAEFWRGLSLVREGKYAESIAKFSSSVSAFSSSAPAA SEEAVLGEGEGAGAGDTTRIRSLALEYYGSFLYLMGDMDTALEHLRRAGE VDETNVKSWVKRGSVLSDLGRREEA back to topmRNA from alignment at E-fasciculatus_F_contig10496:2060..4793- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig10496.398.1 ID=mRNA_E-fasciculatus_F_contig10496.398.1|Name=mRNA_E-fasciculatus_F_contig10496.398.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2734bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10496:2060..4793- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female) CCCCATCCGTCCAGACACCTTGCTGAGCTTCGCGCCGGCCTAGCCAAGTT
CGAGATGCGCGGCGGAGACCTGGAGGCCGCGGTCGCCCACGCGGAGGCAG
CCCTGGCGGAACACCCCGCCTGCGGGGACGCGTTCCTGATCAGGGGACAG
TGCCGCCGCGAGCTGGGCGACAACAGCGGCGCGCTGAGCGACCTGGTGAA
CGCCTTCGTGCTGCAGGGGAACGCCTTGAACAACGCCGGGGACGGGTCGG
AAGCCCAGGCCATAGAAGACGTCTCGCGGGAGAGCTGCAGGGAGAGGGCA
GGGTGAGAGAGCTAGCGGACCTGGGGGGGTCGCCGGAGGGAATNNNNNNN
NNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGTTCCGAGCGGCTAGATCAGATTTTTCCTCTGCCGACGGTCAG
TTATCTGTCTGTCTGTCTGTCTGTGGTTTTGTCGTTGGATGACGGAGGGG
CGGACGAGCCTCCCGCGAATTGCGGCCGCGATGTAAGAAGCGCCGAGTTT
GGTGTGTAGGGATTCACCGTGCCTGCGTAGCGTCTCGCGATGCATCTCAC
AGGAATTGATCTTAATGTTTCTTTCCACAATGGTAGCGTGTACATAGGAG
TACCAGAAACGTTTTTTTTTGTGTTCTTGCGAAGGATCGAATAAAATCGC
TCCAACAAGTTGGTGTGTGTTTCCGACAGGGTAACTACACGGGTGCTTGC
GGTAGAGTGCTACACTTAAGGCCACAACGAGCGGCGAAGAAGGGTCGGCT
GTCTCTTTTCAGGCAAAAAAAAAATGCCCCCGAAAATGGGTCCGTTTTGT
ATGCTGGAGTGCCGTCCGCTTCTGCCAACCTGCTGTCTCGGGACTCGCGA
TGGTCGTGGGTGTGGCGTGGTTTTCGTTTTGCTGGCGTGGTGGCGTTTGA
TCGTTTCCGGGTCAGGTCGGGTTTTGGTTCTCGATTCCCTGCCGTGCAAT
AAAGGGGGCGATATTTCGACGTCTGTTTTCTTCGCTCTTGGTGTGTCGGT
ACAGATGTGGTGTTTTGGTTGCAGGGGCAGGCCTTCTACCTAGACATGAT
GGCATTTCTTACCTCTTTGTCAAAGTGCGTCGAAACCTGCCAGTCCGCGA
GCACCTCTCTTTTGCTCTTGCGGTTGATCTCGCTGCGTGTTTACGGGCAG
CACAGCTCCGTTTCCATAATATGTCAGTCAAGTTTATTGCACTCGGAAGC
CGTATTGTCGAGGATATGGTATGCGAGCCTTGTTCCTTTTAAAAGAAAAT
ACAATTTTTTCCCCCCCGCCATTCCACGCCATGTTTGATCACGAACCCCC
CCCCCCCGATGCCTCTTATCCAGGGAAGAGTTCTCCCAGCGGGCGGCCCC
CAATGCTTTGCCGGCTGACTGGGTCGTGCGGAGCTTTCTGACGTCTTACG
ACACAGAGGTACATGATTTGAGTCTGATCATGGTGGATGCTAAAAATTGT
TGTTGTTGTTGCTGCTGCTGCTACTGATGCTGTTGCGTTCTTCACACATC
GAAAACACGCTGGCCCACATGTCCAGCCCGAGGCAAACGATTACGTTGCT
GAATTTTACTGTATCTCCCGGGCTCTGAAGGGTTATATATCACGTGTTGA
AACCAGAATGCTTGCTCTATCCAATCTCAAAGAGATTAGAAACGCCATGC
CCCCCTCCGTGCGGCTTGCTTTCCGTGCCGACAACAAACGCGCACAACAC
ATTTTTCAACAAGGGCTTGTACGAGGAGCACGACGCCGTGTTGAGGCTAC
ACGGAGAAGACCCCGCGGCGGCGGCGGAAGCGGAAGGAGATGAAGGAGGG
CAGGCGGCAGCAGCGGTGGCAGAGTTCTGGCGAGGGTTAAGCCTGGTGAG
GGAGGGGAAGTACGCGGAGAGCATCGCCAAGTTCTCCTCTTCCGTGTCTG
CTTTTTCGTCTTCCGCCCCTGCTGCTTCTGAAGAGGCGGTTCTGGGGGAG
GGGGAGGGGGCGGGGGCGGGGGATACCACCAGGATTCGGTCTCTAGCGCT
AGAGTACTACGGGTCGTTTTTGTACCTCATGGGTGATATGGACACGGCTC
TGGAGCATCTCAGGTGCGCTTTTTGTTATAGTGGTCCGATCCTGTTTAGT
TTCTGTTGTTATTTTTCGAACGCCCCTTCTGGATATATAGAGAGACACCC
ATCAGTAGCATATTTACTATGGGGTGTGTTTTATTTATTTAGTTGTTTTT
GGTTTGGGGAATGGTCTTGATTTCGGGGAGACGACATCTAGAGAGACACC
CATCAACAGCATATTTACTATGGGGTGTGTTTTATTTATTCGATTGTTTT
TGGTTTGGGGACTGGTCTTGATTTCGGGGAGACGACATCTAGAGAGACAC
CCATCAACAGCATATTTACTATGGGGTGTGTTTTATTTTTTTGATTGTTT
TTGGTTTCGGGGAGACGATATCTAGAGAGACACCCGTCAAATGCGCTATC
AATTATTTATTGTGCCAGGGTAGTCTTCCTCTCTGTCGCTACTGCTATCC
ATGTTGTCTTGTCGTGACGATATTTCCAGTCCTGAGTGACAGCTGATCTC
GATAACGCCCATTGCCTTGTCTACCGAACTTGTCTTGTCTTGAAGACGTG
CGGGCGAGGTGGACGAGACGAACGTGAAGAGCTGGGTGAAGAGAGGGAGC
GTCTTGAGCGATCTAGGTCGGCGTGAAGAGGCAA back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig10496:2060..4793- >mRNA_E-fasciculatus_F_contig10496.398.1 ID=mRNA_E-fasciculatus_F_contig10496.398.1|Name=mRNA_E-fasciculatus_F_contig10496.398.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1650bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10496:2060..4793- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female) CCCCATCCGTCCAGACACCTTGCTGAGCTTCGCGCCGGCCTAGCCAAGTT CGAGATGCGCGGCGGAGACCTGGAGGCCGCGGTCGCCCACGCGGAGGCAG CCCTGGCGGAACACCCCGCCTGCGGGGACGCGTTCCTGATCAGGGGACAG TGCCGCCGCGAGCTGGGCGACAACAGCGGCGCGCTGAGCGACCTGGTGAA CGCCTTCGTGCTGCAGGGGAACGCCTTGAACAACGCCGGGGACGGGTCGG AAGCCCAGGCCATAGAAGACGTCTCGCGGGAGAGCTGCAGGGAGAGGGCA GGCCCCATCCGTCCAGACACCTTGCTGAGCTTCGCGCCGGCCTAGCCAAG TTCGAGATGCGCGGCGGAGACCTGGAGGCCGCGGTCGCCCACGCGGAGGC AGCCCTGGCGGAACACCCCGCCTGCGGGGACGCGTTCCTGATCAGGGGAC AGTGCCGCCGCGAGCTGGGCGACAACAGCGGCGCGCTGAGCGACCTGGTG AACGCCTTCGTGCTGCAGGGGAACGCCTTGAACAACGCCGGGGACGGGTC GGAAGCCCAGGCCATAGAAGACGTCTCGCGGGAGAGCTGCAGGGAGAGGG CAGGGGAAGAGTTCTCCCAGCGGGCGGCCCCCAATGCTTTGCCGGCTGAC TGGGTCGTGCGGAGCTTTCTGACGTCTTACGACACAGAGGGAAGAGTTCT CCCAGCGGGCGGCCCCCAATGCTTTGCCGGCTGACTGGGTCGTGCGGAGC TTTCTGACGTCTTACGACACAGAGGGCTTGTACGAGGAGCACGACGCCGT GTTGAGGCTACACGGAGAAGACCCCGCGGCGGCGGCGGAAGCGGAAGGAG ATGAAGGAGGGCAGGCGGCAGCAGCGGTGGCAGAGTTCTGGCGAGGGTTA AGCCTGGTGAGGGAGGGGAAGTACGCGGAGAGCATCGCCAAGTTCTCCTC TTCCGTGTCTGCTTTTTCGTCTTCCGCCCCTGCTGCTTCTGAAGAGGCGG TTCTGGGGGAGGGGGAGGGGGCGGGGGCGGGGGATACCACCAGGATTCGG TCTCTAGCGCTAGAGTACTACGGGTCGTTTTTGTACCTCATGGGTGATAT GGACACGGCTCTGGAGCATCTCAGGGCTTGTACGAGGAGCACGACGCCGT GTTGAGGCTACACGGAGAAGACCCCGCGGCGGCGGCGGAAGCGGAAGGAG ATGAAGGAGGGCAGGCGGCAGCAGCGGTGGCAGAGTTCTGGCGAGGGTTA AGCCTGGTGAGGGAGGGGAAGTACGCGGAGAGCATCGCCAAGTTCTCCTC TTCCGTGTCTGCTTTTTCGTCTTCCGCCCCTGCTGCTTCTGAAGAGGCGG TTCTGGGGGAGGGGGAGGGGGCGGGGGCGGGGGATACCACCAGGATTCGG TCTCTAGCGCTAGAGTACTACGGGTCGTTTTTGTACCTCATGGGTGATAT GGACACGGCTCTGGAGCATCTCAGACGTGCGGGCGAGGTGGACGAGACGA ACGTGAAGAGCTGGGTGAAGAGAGGGAGCGTCTTGAGCGATCTAGGTCGG CGTGAAGAGGCAACGTGCGGGCGAGGTGGACGAGACGAACGTGAAGAGCT GGGTGAAGAGAGGGAGCGTCTTGAGCGATCTAGGTCGGCGTGAAGAGGCA back to top
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