mRNA_E-fasciculatus_F_contig15784.3979.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15784.3979.1 vs. uniprot
Match: A0A6H5KNK6_9PHAE (Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNK6_9PHAE) HSP 1 Score: 246 bits (629), Expect = 4.540e-75 Identity = 114/118 (96.61%), Postives = 116/118 (98.31%), Query Frame = 1
Query: 1 GRIMLGVHYRQLMTTTMLLVLTWLLFFIFILPSYGRWSFAFVSACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPW 354
GRIMLGVHYRQLMTTTMLL LTWLLFF+FILPSYGRWSFA V+ACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPW
Sbjct: 542 GRIMLGVHYRQLMTTTMLLFLTWLLFFVFILPSYGRWSFAMVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPW 659
BLAST of mRNA_E-fasciculatus_F_contig15784.3979.1 vs. uniprot
Match: D7FZN5_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZN5_ECTSI) HSP 1 Score: 194 bits (494), Expect = 2.730e-58 Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 1
Query: 91 LPSYGRWSFAFVSACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPW 354
LPSYGRWSFA V+ACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPW
Sbjct: 226 LPSYGRWSFALVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPW 313
BLAST of mRNA_E-fasciculatus_F_contig15784.3979.1 vs. uniprot
Match: A0A835YZ83_9STRA (Palmitoyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ83_9STRA) HSP 1 Score: 129 bits (324), Expect = 5.320e-34 Identity = 59/118 (50.00%), Postives = 77/118 (65.25%), Query Frame = 1
Query: 1 GRIMLGVHYRQLMTTTMLLVLTWLLFFIFILPSYGRWSFAFVSACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPW 354
G++MLGVH QL T L++ TWLLF +F+ P+Y W V A + C V+L ++ +PGIIP + S + + R +L+YCITCHIVRPPR KHC+HCN CV FDHHCPW
Sbjct: 61 GKLMLGVHCDQLWVTGSLILGTWLLFLVFVAPNYTGWWCVGVGAAMLVLCLVTLAETAVTEPGIIPPQPRSDAAEGMSASTRGKLNYCITCHIVRPPRAKHCRHCNVCVRRFDHHCPW 178
BLAST of mRNA_E-fasciculatus_F_contig15784.3979.1 vs. uniprot
Match: A0A812WJG5_SYMMI (Palmitoyltransferase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WJG5_SYMMI) HSP 1 Score: 117 bits (293), Expect = 3.750e-29 Identity = 55/118 (46.61%), Postives = 75/118 (63.56%), Query Frame = 1
Query: 1 GRIMLGVHYRQLMTTTMLLVLTWLLFFIFILPSYGRWSFAFVSACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPW 354
GRIM+G H L+ + LLV+T+ LF + ++P ++ L G L+ ++ +PGIIPRR S L +S+ ED R +L YC TC IVRPPR KHC++C+NCV FDHHCPW
Sbjct: 99 GRIMMGAHSNHLLLSITLLVVTYSLFLLGVVPLLHMPILFYIGVGLAVGTLTFLLLTALTEPGIIPRRPPSKLLESMSEDARQKLQYCHTCRIVRPPRAKHCRYCDNCVEVFDHHCPW 216
BLAST of mRNA_E-fasciculatus_F_contig15784.3979.1 vs. uniprot
Match: D8LTN2_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTN2_ECTSI) HSP 1 Score: 114 bits (284), Expect = 2.090e-28 Identity = 62/124 (50.00%), Postives = 81/124 (65.32%), Query Frame = 1
Query: 1 GRIMLGVHYRQLMTTTMLLVLTWLLFFIFI-LPS--YGRWSF-AFVSACLCTGCFVSLVFSSFLDPGIIPRRAAS--GLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPW 354
GRI++G H R L + +L+ T LFF FI LP+ YG W+F + VS CL GC +SL ++ +DPGIIPRR + D DV ++ S C+TC + RPPR KHCK CNNCV+ FDHHCP+
Sbjct: 26 GRIVVGSHCRALAFSATILLFTATLFFTFISLPATTYGGWAFFSTVSVCLFVGCIISLASTAMMDPGIIPRRTLALWNSLDPASPDVAERKS-CVTCQLARPPRAKHCKRCNNCVMEFDHHCPF 148
BLAST of mRNA_E-fasciculatus_F_contig15784.3979.1 vs. uniprot
Match: A0A7S3UWP6_HETAK (Palmitoyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWP6_HETAK) HSP 1 Score: 105 bits (262), Expect = 1.070e-24 Identity = 40/65 (61.54%), Postives = 54/65 (83.08%), Query Frame = 1
Query: 160 LVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPW 354
L+ ++ DPGIIPR S L +S+P +++++++YC TCHIVRPPRTKHC+HCNNC+ TFDHHCPW
Sbjct: 17 LLVTALRDPGIIPRHPPSQLVESMPPEMKEKMNYCPTCHIVRPPRTKHCRHCNNCIQTFDHHCPW 81
BLAST of mRNA_E-fasciculatus_F_contig15784.3979.1 vs. uniprot
Match: F0Y087_AURAN (Palmitoyltransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y087_AURAN) HSP 1 Score: 98.6 bits (244), Expect = 2.700e-22 Identity = 50/122 (40.98%), Postives = 70/122 (57.38%), Query Frame = 1
Query: 1 GRIMLGVHYRQLMTTTMLLVLTWLLFFIFILPSYGRWSFAFVSACLCTG----CFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPW 354
GR+MLGV +L+ T +L+ TW F P+ F C G CFV L ++ DPGI+PR S +P + + ++++C TC I+RPPR KHC++C+NCV FDHHCPW
Sbjct: 42 GRLMLGVDCDRLLATALLIATTWAGHFFVTWPNLD-----FDERCGAGGIAVLCFVCLAAAATRDPGIVPRLPRSDRLSGLPCETQYRMNWCQTCQILRPPRAKHCRYCDNCVRVFDHHCPW 158
BLAST of mRNA_E-fasciculatus_F_contig15784.3979.1 vs. uniprot
Match: A0A3P3YIW4_PLABS (Palmitoyltransferase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YIW4_PLABS) HSP 1 Score: 90.9 bits (224), Expect = 9.720e-20 Identity = 51/126 (40.48%), Postives = 75/126 (59.52%), Query Frame = 1
Query: 1 GRIMLGVHYRQLMTTTMLLVLTWLLFFIFILPSYGRWSFAFVSACLCTGCFVSLVF---SSFLDPGIIPRRAASGLPDSIPEDVRDQLS-----YCITCHIVRPPRTKHCKHCNNCVLTFDHHCPW 354
GR+++G + T +LLV +LF +++ S G W+ V C C FVS +F ++F DPG+IP+ ++G + PED + + YC TC+I RPPR KHC+ C+NCV+ FDHHC W
Sbjct: 13 GRVVVGSQPAAAVGTLVLLVAAHVLFALYVAQSVGLWA---VLTCSCLA-FVSTIFLVTTAFSDPGVIPKGPSNGSAEP-PEDFQVTAAGPSHKYCETCNIWRPPRAKHCRLCDNCVIRFDHHCGW 133
BLAST of mRNA_E-fasciculatus_F_contig15784.3979.1 vs. uniprot
Match: A0A0G4HGJ7_9ALVE (Palmitoyltransferase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HGJ7_9ALVE) HSP 1 Score: 88.6 bits (218), Expect = 2.090e-18 Identity = 50/131 (38.17%), Postives = 68/131 (51.91%), Query Frame = 1
Query: 1 GRIMLGVHYRQLMTTTMLLVLTWLLFFIFILP---SYGRWSFAFVSACLCTGCFVSLVFSSFLDPGIIPR----------RAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPW 354
GR+M G QL+ T L++ +FFI ++P + G W F S L G + L ++F++PGI PR + + + I V +C TC I RPPR+KHC CNNCV FDHHCPW
Sbjct: 30 GRLMTGPQPAQLLCTLALILTPCTIFFILVIPFAVTEGSWWFLAPSLLL-PGSLICLFMAAFIEPGIYPRANPPLEDLPLEGSRAMKEVIINGVSVVSKWCDTCRIYRPPRSKHCVFCNNCVAKFDHHCPW 159
BLAST of mRNA_E-fasciculatus_F_contig15784.3979.1 vs. uniprot
Match: A0A830B260_9LAMI (S-acyltransferase n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830B260_9LAMI) HSP 1 Score: 83.2 bits (204), Expect = 7.850e-17 Identity = 49/124 (39.52%), Postives = 65/124 (52.42%), Query Frame = 1
Query: 1 GRIMLGVHYRQLMTTTMLLVLTWLLFFIFILPSYGRWSFAFVSACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRD------QLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPW 354
GR++ G R L+ TTM + L+ +F ++ S + +C+ V+L S DPGIIPR S L D D +L YC C+I RPPRT+HC C+NCV FDHHCPW
Sbjct: 15 GRLVCGPDPRGLLLTTMAISLSSWIFATYVANDIPANSSVVI---ICSAVLVNLGTVSMTDPGIIPRNDRSSLIDRSMRKTVDINGIEVRLKYCSICNIYRPPRTRHCVVCDNCVERFDHHCPW 135 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15784.3979.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15784.3979.1 >prot_E-fasciculatus_F_contig15784.3979.1 ID=prot_E-fasciculatus_F_contig15784.3979.1|Name=mRNA_E-fasciculatus_F_contig15784.3979.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=116bp MLGVHYRQLMTTTMLLVLTWLLFFIFILPSYGRWSFAFVSACLCTGCFVSback to top mRNA from alignment at E-fasciculatus_F_contig15784:608..2490- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15784.3979.1 ID=mRNA_E-fasciculatus_F_contig15784.3979.1|Name=mRNA_E-fasciculatus_F_contig15784.3979.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1883bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15784:608..2490- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15784:608..2490- >mRNA_E-fasciculatus_F_contig15784.3979.1 ID=mRNA_E-fasciculatus_F_contig15784.3979.1|Name=mRNA_E-fasciculatus_F_contig15784.3979.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=696bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15784:608..2490- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |