mRNA_E-fasciculatus_F_contig15779.3975.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig15779.3975.1
Unique NamemRNA_E-fasciculatus_F_contig15779.3975.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig15779.3975.1 vs. uniprot
Match: D7G2R9_ECTSI (Cilia- and flagella-associated protein 299 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R9_ECTSI)

HSP 1 Score: 297 bits (760), Expect = 1.780e-100
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1
Query:   19 KDLSASPFLLALGNREELVRNGKLTSIIFVRDVNSKGQEVSGYIDYAHRLRSTNFEPYFERRKKLMPRPTDLSYYNWETQTSTSTSTPNFQVIADGEAGLLFKNKRDRKVVNVDPKAPPGDNTTRTEIRTPEYRQVVIYDHMTRRKS 459
            KDLSASPFLLALGNREELVRNGKLTSIIFVRDVNSKGQEVSGYIDYAHRLRSTNFEPYFERRKKLMPRPTDLSYYNWETQTSTSTSTPNFQVIADGEAGLLFKNKRDRKVVNVDPKAPPGDNTTRTEIRTPEYRQVVIYDHMTRRKS
Sbjct:   93 KDLSASPFLLALGNREELVRNGKLTSIIFVRDVNSKGQEVSGYIDYAHRLRSTNFEPYFERRKKLMPRPTDLSYYNWETQTSTSTSTPNFQVIADGEAGLLFKNKRDRKVVNVDPKAPPGDNTTRTEIRTPEYRQVVIYDHMTRRKS 239          
BLAST of mRNA_E-fasciculatus_F_contig15779.3975.1 vs. uniprot
Match: A0A7S1CI53_9STRA (Cilia- and flagella-associated protein 299 n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CI53_9STRA)

HSP 1 Score: 258 bits (660), Expect = 2.850e-85
Identity = 124/147 (84.35%), Postives = 138/147 (93.88%), Query Frame = 1
Query:   19 KDLSASPFLLALGNREELVRNGKLTSIIFVRDVNSKGQEVSGYIDYAHRLRSTNFEPYFERRKKLMPRPTDLSYYNWETQTSTSTSTPNFQVIADGEAGLLFKNKRDRKVVNVDPKAPPGDNTTRTEIRTPEYRQVVIYDHMTRRKS 459
            KDLSA PFL AL NREELVRNGKLTSIIF+RDVN+KGQEVSGYIDYAHRL++ NFEPYF+R++KL+P+P+DLSYYNWETQTSTS S+PNFQVIAD EAGLLFKNKRDRKV+NVDPK+ PGDN+TRTEIRT EY QVVIYDHMTRRKS
Sbjct:   92 KDLSAFPFLQALANREELVRNGKLTSIIFIRDVNAKGQEVSGYIDYAHRLKTENFEPYFDRKRKLLPKPSDLSYYNWETQTSTSNSSPNFQVIADNEAGLLFKNKRDRKVINVDPKSNPGDNSTRTEIRTKEYLQVVIYDHMTRRKS 238          
BLAST of mRNA_E-fasciculatus_F_contig15779.3975.1 vs. uniprot
Match: A0A835ZKU0_9STRA (Cilia- and flagella-associated protein 299 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKU0_9STRA)

HSP 1 Score: 250 bits (639), Expect = 5.080e-82
Identity = 119/152 (78.29%), Postives = 137/152 (90.13%), Query Frame = 1
Query:    4 VACGEKDLSASPFLLALGNREELVRNGKLTSIIFVRDVNSKGQEVSGYIDYAHRLRSTNFEPYFERRKKLMPRPTDLSYYNWETQTSTSTSTPNFQVIADGEAGLLFKNKRDRKVVNVDPKAPPGDNTTRTEIRTPEYRQVVIYDHMTRRKS 459
            +A   K++ +SPFL AL NREELVRNGKLTSIIF+RD NSKGQEVSGYID+A RL++ NFEPYF+++KKLMP+P+DLSYYNWETQT+TSTSTPNFQVIAD EAGLLFKNKRDRKV+NVDPK PPGDNTTR E+++ EY QVVIYDHMTRRK 
Sbjct:   91 LASAGKNVDSSPFLHALANREELVRNGKLTSIIFIRDKNSKGQEVSGYIDFAQRLKTENFEPYFDKKKKLMPKPSDLSYYNWETQTTTSTSTPNFQVIADSEAGLLFKNKRDRKVINVDPKVPPGDNTTRIEVKSLEYMQVVIYDHMTRRKG 242          
BLAST of mRNA_E-fasciculatus_F_contig15779.3975.1 vs. uniprot
Match: A0A2R5GCS3_9STRA (Cilia- and flagella-associated protein 299 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCS3_9STRA)

HSP 1 Score: 249 bits (636), Expect = 1.500e-81
Identity = 123/154 (79.87%), Postives = 136/154 (88.31%), Query Frame = 1
Query:    4 VACGEKDLSASPFLLALGNREELVRNGKLTSIIFVRDVNSKGQ--EVSGYIDYAHRLRSTNFEPYFERRKKLMPRPTDLSYYNWETQTSTSTSTPNFQVIADGEAGLLFKNKRDRKVVNVDPKAPPGDNTTRTEIRTPEYRQVVIYDHMTRRKS 459
            +A   KDL+  PFL AL NREELVRNGKLTSIIF+RD  +KGQ  EVSGYID+AHRL++ NFEPYF+R+KKLMP+PTDLSYYNWET TSTS STPNFQVIAD EAGLLFKNKRDRKV+NVDPKA PGDN+TRTEI+T EY QVVIYDHMTRRKS
Sbjct:   90 LASASKDLNGFPFLQALANREELVRNGKLTSIIFIRDKTNKGQGQEVSGYIDFAHRLKTENFEPYFDRKKKLMPKPTDLSYYNWETHTSTSNSTPNFQVIADNEAGLLFKNKRDRKVINVDPKANPGDNSTRTEIQTDEYLQVVIYDHMTRRKS 243          
BLAST of mRNA_E-fasciculatus_F_contig15779.3975.1 vs. uniprot
Match: F0Y4F2_AURAN (Cilia- and flagella-associated protein 299 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4F2_AURAN)

HSP 1 Score: 242 bits (618), Expect = 6.090e-79
Identity = 117/152 (76.97%), Postives = 135/152 (88.82%), Query Frame = 1
Query:    4 VACGEKDLSASPFLLALGNREELVRNGKLTSIIFVRDVNSKGQEVSGYIDYAHRLRSTNFEPYFERRKKLMPRPTDLSYYNWETQTSTSTSTPNFQVIADGEAGLLFKNKRDRKVVNVDPKAPPGDNTTRTEIRTPEYRQVVIYDHMTRRKS 459
            +A   KDLSA PFLLAL NRE LVRNGKLTSIIF+RD N+KGQEVSGYIDYAHRL++ NFEPYF+ +K+LMP+PTDLSYYNWETQTST  STPNFQVIAD + GLLFKNKRDRKV+NVDPK  PGDN++R E++TPEY QVVI+DH+TRRK+
Sbjct:   84 LASANKDLSAQPFLLALANREALVRNGKLTSIIFLRDKNAKGQEVSGYIDYAHRLKTENFEPYFKGQKRLMPKPTDLSYYNWETQTSTHNSTPNFQVIADSD-GLLFKNKRDRKVINVDPKQNPGDNSSRNELKTPEYLQVVIFDHLTRRKN 234          
BLAST of mRNA_E-fasciculatus_F_contig15779.3975.1 vs. uniprot
Match: L1JGC3_GUITC (Cilia- and flagella-associated protein 299 n=5 Tax=Cryptophyceae TaxID=3027 RepID=L1JGC3_GUITC)

HSP 1 Score: 242 bits (617), Expect = 8.650e-79
Identity = 117/152 (76.97%), Postives = 135/152 (88.82%), Query Frame = 1
Query:    4 VACGEKDLSASPFLLALGNREELVRNGKLTSIIFVRDVNSKGQEVSGYIDYAHRLRSTNFEPYFERRKKLMPRPTDLSYYNWETQTSTSTSTPNFQVIADGEAGLLFKNKRDRKVVNVDPKAPPGDNTTRTEIRTPEYRQVVIYDHMTRRKS 459
            +A  +KDLS  PFL +L  RE+LVRNGKLTSIIF+RD NSKGQEVSGYIDYAHRL++ +FEPYF+R+KKLMP+P+DLSYYNWETQ STS STPNFQVIAD EAGLLFKNKRDRKV+NVDPK+ PGDN+ R EI+T EY QVVIYDH+TRRK+
Sbjct:   83 LASADKDLSHFPFLHSLAEREDLVRNGKLTSIIFLRDKNSKGQEVSGYIDYAHRLKTEDFEPYFDRKKKLMPKPSDLSYYNWETQHSTSNSTPNFQVIADNEAGLLFKNKRDRKVINVDPKSLPGDNSRRIEIKTNEYAQVVIYDHVTRRKT 234          
BLAST of mRNA_E-fasciculatus_F_contig15779.3975.1 vs. uniprot
Match: A0A812J512_9DINO (Cilia- and flagella-associated protein 299 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812J512_9DINO)

HSP 1 Score: 241 bits (615), Expect = 1.530e-78
Identity = 116/147 (78.91%), Postives = 130/147 (88.44%), Query Frame = 1
Query:   19 KDLSASPFLLALGNREELVRNGKLTSIIFVRDVNSKGQEVSGYIDYAHRLRSTNFEPYFERRKKLMPRPTDLSYYNWETQTSTSTSTPNFQVIADGEAGLLFKNKRDRKVVNVDPKAPPGDNTTRTEIRTPEYRQVVIYDHMTRRKS 459
            KDL+  PFL AL NREELVRNGKLT+IIF+RD N+KGQEVSGYID+AHRL++ NFEPYFE  K LMPRP+DLSYYNWETQTSTS S+PNFQVIAD E GLLFKNKRDRKV+NVDPKA  GDN+TR+EIRT E+ QVV+YDHMTRRK 
Sbjct:   84 KDLADKPFLQALANREELVRNGKLTTIIFIRDYNAKGQEVSGYIDFAHRLKTENFEPYFEGTKTLMPRPSDLSYYNWETQTSTSNSSPNFQVIADSETGLLFKNKRDRKVINVDPKASAGDNSTRSEIRTHEFAQVVLYDHMTRRKG 230          
BLAST of mRNA_E-fasciculatus_F_contig15779.3975.1 vs. uniprot
Match: A0A024TQ62_9STRA (Cilia- and flagella-associated protein 299 n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TQ62_9STRA)

HSP 1 Score: 239 bits (609), Expect = 1.540e-78
Identity = 117/152 (76.97%), Postives = 132/152 (86.84%), Query Frame = 1
Query:    4 VACGEKDLSASPFLLALGNREELVRNGKLTSIIFVRDVNSKGQEVSGYIDYAHRLRSTNFEPYFERRKKLMPRPTDLSYYNWETQTSTSTSTPNFQVIADGEAGLLFKNKRDRKVVNVDPKAPPGDNTTRTEIRTPEYRQVVIYDHMTRRKS 459
            +A   KD S   FL AL +REE+VRNGKLTSIIF+RD NSKGQEVSGYIDYA RL+S  FEPYFER+K+L+P+P+DLSYYNWETQT TS S+PNFQVIAD E GLLFKNKRDRKV+NVDPKA PGDN+TRTEI+T EY QVVIYDHMTRRK+
Sbjct:   16 LASAGKDFSQFAFLSALASREEMVRNGKLTSIIFIRDHNSKGQEVSGYIDYALRLKSEAFEPYFERKKRLLPKPSDLSYYNWETQTCTSNSSPNFQVIADSETGLLFKNKRDRKVINVDPKANPGDNSTRTEIKTNEYMQVVIYDHMTRRKN 167          
BLAST of mRNA_E-fasciculatus_F_contig15779.3975.1 vs. uniprot
Match: H3G868_PHYRM (Cilia- and flagella-associated protein 299 n=24 Tax=Oomycota TaxID=4762 RepID=H3G868_PHYRM)

HSP 1 Score: 241 bits (615), Expect = 1.920e-78
Identity = 118/152 (77.63%), Postives = 133/152 (87.50%), Query Frame = 1
Query:    4 VACGEKDLSASPFLLALGNREELVRNGKLTSIIFVRDVNSKGQEVSGYIDYAHRLRSTNFEPYFERRKKLMPRPTDLSYYNWETQTSTSTSTPNFQVIADGEAGLLFKNKRDRKVVNVDPKAPPGDNTTRTEIRTPEYRQVVIYDHMTRRKS 459
            +A   KDLS  PFL AL +RE+LVRNGKLT IIF+RD N+KGQE+SGYIDYA RL++  FEPYFER+KKL+P+ +DLSYYNWETQTSTS STPNFQVIAD E GLLFKNKRDRKVVNVDPKA PGDN+TRTEI+T EY QVVIYDHMTRRK+
Sbjct:   86 LASAGKDLSQYPFLAALASREDLVRNGKLTCIIFIRDKNAKGQEISGYIDYALRLKNEPFEPYFERKKKLLPKSSDLSYYNWETQTSTSNSTPNFQVIADSETGLLFKNKRDRKVVNVDPKANPGDNSTRTEIKTKEYLQVVIYDHMTRRKT 237          
BLAST of mRNA_E-fasciculatus_F_contig15779.3975.1 vs. uniprot
Match: A0A067BQR6_SAPPC (Cilia- and flagella-associated protein 299 n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BQR6_SAPPC)

HSP 1 Score: 240 bits (613), Expect = 2.370e-78
Identity = 117/152 (76.97%), Postives = 132/152 (86.84%), Query Frame = 1
Query:    4 VACGEKDLSASPFLLALGNREELVRNGKLTSIIFVRDVNSKGQEVSGYIDYAHRLRSTNFEPYFERRKKLMPRPTDLSYYNWETQTSTSTSTPNFQVIADGEAGLLFKNKRDRKVVNVDPKAPPGDNTTRTEIRTPEYRQVVIYDHMTRRKS 459
            +A   KD S  PFL AL +REE+VRNGKLTSIIF+RD N KGQEVSGYIDYA RL+S  FEPYFER+K+L+P+P+DLSYYNWETQT TS S+PNFQVIAD E GLLFKNKRDRKV+NVDPKA PGDN+TRTEI+T EY QVVIYDHMTRRK+
Sbjct:   71 LASAGKDFSQLPFLSALASREEMVRNGKLTSIIFIRDRNPKGQEVSGYIDYALRLKSEPFEPYFERKKRLLPKPSDLSYYNWETQTCTSNSSPNFQVIADSETGLLFKNKRDRKVINVDPKANPGDNSTRTEIKTAEYMQVVIYDHMTRRKN 222          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15779.3975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2R9_ECTSI1.780e-100100.00Cilia- and flagella-associated protein 299 n=2 Tax... [more]
A0A7S1CI53_9STRA2.850e-8584.35Cilia- and flagella-associated protein 299 n=1 Tax... [more]
A0A835ZKU0_9STRA5.080e-8278.29Cilia- and flagella-associated protein 299 n=1 Tax... [more]
A0A2R5GCS3_9STRA1.500e-8179.87Cilia- and flagella-associated protein 299 n=1 Tax... [more]
F0Y4F2_AURAN6.090e-7976.97Cilia- and flagella-associated protein 299 n=1 Tax... [more]
L1JGC3_GUITC8.650e-7976.97Cilia- and flagella-associated protein 299 n=5 Tax... [more]
A0A812J512_9DINO1.530e-7878.91Cilia- and flagella-associated protein 299 n=1 Tax... [more]
A0A024TQ62_9STRA1.540e-7876.97Cilia- and flagella-associated protein 299 n=2 Tax... [more]
H3G868_PHYRM1.920e-7877.63Cilia- and flagella-associated protein 299 n=24 Ta... [more]
A0A067BQR6_SAPPC2.370e-7876.97Cilia- and flagella-associated protein 299 n=1 Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15779contigE-fasciculatus_F_contig15779:1163..2379 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score246.1
Seed ortholog evalue1e-62
Seed eggNOG ortholog42099.EPrPV00000016615
Preferred nameC4orf22
EggNOG free text desc.flagellar basal body protein Chlamydomonas reinhardtii . Source PGD
EggNOG OGs1MFFA@121069,28K8J@1,2QSP8@2759
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size462
Cds size462
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15779.3975.1prot_E-fasciculatus_F_contig15779.3975.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig15779 1163..2379 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928047.9710076-CDS-E-fasciculatus_F_contig15779:1162..13331622928047.9710076-CDS-E-fasciculatus_F_contig15779:1162..1333Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15779 1163..1333 -
1695995802.1478221-CDS-E-fasciculatus_F_contig15779:1162..13331695995802.1478221-CDS-E-fasciculatus_F_contig15779:1162..1333Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15779 1163..1333 -
1622928047.9870844-CDS-E-fasciculatus_F_contig15779:1716..17971622928047.9870844-CDS-E-fasciculatus_F_contig15779:1716..1797Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15779 1717..1797 -
1695995802.1670477-CDS-E-fasciculatus_F_contig15779:1716..17971695995802.1670477-CDS-E-fasciculatus_F_contig15779:1716..1797Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15779 1717..1797 -
1622928048.0019147-CDS-E-fasciculatus_F_contig15779:2169..23791622928048.0019147-CDS-E-fasciculatus_F_contig15779:2169..2379Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15779 2170..2379 -
1695995802.1788142-CDS-E-fasciculatus_F_contig15779:2169..23791695995802.1788142-CDS-E-fasciculatus_F_contig15779:2169..2379Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15779 2170..2379 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig15779.3975.1

>prot_E-fasciculatus_F_contig15779.3975.1 ID=prot_E-fasciculatus_F_contig15779.3975.1|Name=mRNA_E-fasciculatus_F_contig15779.3975.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=154bp
FVACGEKDLSASPFLLALGNREELVRNGKLTSIIFVRDVNSKGQEVSGYI
DYAHRLRSTNFEPYFERRKKLMPRPTDLSYYNWETQTSTSTSTPNFQVIA
DGEAGLLFKNKRDRKVVNVDPKAPPGDNTTRTEIRTPEYRQVVIYDHMTR
RKS*
back to top

mRNA from alignment at E-fasciculatus_F_contig15779:1163..2379-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig15779.3975.1 ID=mRNA_E-fasciculatus_F_contig15779.3975.1|Name=mRNA_E-fasciculatus_F_contig15779.3975.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1217bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15779:1163..2379- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TTTGTTGCTTGCGGAGAAAAGGACTTGAGCGCTTCCCCGTTCCTGCTTGC CCTCGGGAACCGAGAAGAGCTGGTCCGTAACGGCAAGCTGACTTCCATCA TTTTTGTTCGAGACGTGAACAGCAAGGGGCAGGAAGTCAGCGGCTACATC GACTACGCGCACCGGTTGAGGTCGACCAACTTCGAGCCGTACTTCGAGCG ACGAAAAAAGGTGTACCCCCTTTTGTCCGTCCGTCCGTGTGGTGGTCGTC TCGTGTCTAAGGGTTTTAATTTCTTGTTTCGGAACGGTTGATGAGCCGAA ATATTGCTCTCGAAACTACCGTTAGAAACAGCAAGGCGATATTATAGCAG CAGCAACAGTTTAGCAGCAGCAGTGTAAACAGCAACGACCAAGCACAAGA GATCGTGACGGCAGACGCGCACTGCTGGTGTGCGCATCCTGCGAACAAAA TCATCGACAAGATAAATAAGCTGCCGTGGCGTTCACCTTCCCCACAACCA CAGCAGTAGCGAAAACGTCTCACGCAAACGCACGAATTGCGCTTAAGCTT CTCCGGCATCAACCCCCAACCCAACAATACAGCTGATGCCCAGGCCGACG GACTTGAGCTACTACAACTGGGAAACCCAGACTTCAACGTCAACATCTAC ACCCAACTTCCAGGTAAGCTCGTATCTCCACTTACATGTACTTGGAGACG GACCTATATCTTCTGACCTTGGCTACTTTCGTTGCGCCCGTCACTGACAA GTAGTTCGTACATTGAAGGGAGAGCTCTGAGAGGATTAATTCTATCAGAG ACAGACGGGGGGGTTGATTCTATCAATCAATCAATCAGTCCGAGCAGAGC CCTTGTGCTAGGGGGTGGGGTGTACTGTAGATGTTCCAAAGAGTAAGAAA TGTAACCGACCAGATTCGGCCACGATAAATAGCGTAAGGCGAGAAAGAGA CCAAAATCCATCAATTCCAGGTTGAGTTGAGGCAACTTTGGTTGATTGAG GGGACGGAATTTTCGTTTTTTTTCCGGGACGCAATATACTTGACAGGTTA TCGCGGACGGGGAAGCGGGGCTGCTGTTCAAGAACAAGCGAGACCGGAAG GTGGTCAACGTCGACCCCAAGGCTCCGCCAGGCGACAACACGACAAGGAC GGAGATTCGCACCCCGGAGTACCGGCAGGTGGTCATCTACGACCACATGA CGAGAAGGAAAAGCTGA
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15779:1163..2379-

>mRNA_E-fasciculatus_F_contig15779.3975.1 ID=mRNA_E-fasciculatus_F_contig15779.3975.1|Name=mRNA_E-fasciculatus_F_contig15779.3975.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=924bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15779:1163..2379- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TTTGTTGCTTGCGGAGAAAAGGACTTGAGCGCTTCCCCGTTCCTGCTTGC
CCTCGGGAACCGAGAAGAGCTGGTCCGTAACGGCAAGCTGACTTCCATCA
TTTTTGTTCGAGACGTGAACAGCAAGGGGCAGGAAGTCAGCGGCTACATC
GACTACGCGCACCGGTTGAGGTCGACCAACTTCGAGCCGTACTTCGAGCG
ACGAAAAAAGTTTGTTGCTTGCGGAGAAAAGGACTTGAGCGCTTCCCCGT
TCCTGCTTGCCCTCGGGAACCGAGAAGAGCTGGTCCGTAACGGCAAGCTG
ACTTCCATCATTTTTGTTCGAGACGTGAACAGCAAGGGGCAGGAAGTCAG
CGGCTACATCGACTACGCGCACCGGTTGAGGTCGACCAACTTCGAGCCGT
ACTTCGAGCGACGAAAAAAGCTGATGCCCAGGCCGACGGACTTGAGCTAC
TACAACTGGGAAACCCAGACTTCAACGTCAACATCTACACCCAACTTCCA
GCTGATGCCCAGGCCGACGGACTTGAGCTACTACAACTGGGAAACCCAGA
CTTCAACGTCAACATCTACACCCAACTTCCAGGTTATCGCGGACGGGGAA
GCGGGGCTGCTGTTCAAGAACAAGCGAGACCGGAAGGTGGTCAACGTCGA
CCCCAAGGCTCCGCCAGGCGACAACACGACAAGGACGGAGATTCGCACCC
CGGAGTACCGGCAGGTGGTCATCTACGACCACATGACGAGAAGGAAAAGC
TGAGTTATCGCGGACGGGGAAGCGGGGCTGCTGTTCAAGAACAAGCGAGA
CCGGAAGGTGGTCAACGTCGACCCCAAGGCTCCGCCAGGCGACAACACGA
CAAGGACGGAGATTCGCACCCCGGAGTACCGGCAGGTGGTCATCTACGAC
CACATGACGAGAAGGAAAAGCTGA
back to top