prot_E-fasciculatus_F_contig1572.3950.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1572.3950.1
Unique Nameprot_E-fasciculatus_F_contig1572.3950.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length713
Homology
BLAST of mRNA_E-fasciculatus_F_contig1572.3950.1 vs. uniprot
Match: D8LC03_ECTSI (HET-R n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC03_ECTSI)

HSP 1 Score: 1043 bits (2697), Expect = 0.000e+0
Identity = 593/715 (82.94%), Postives = 616/715 (86.15%), Query Frame = 0
Query:    1 MLTTTIRGNGSWSAALDRGQSHSTVVTAAHNSPDCATSPNPYKRRGLLRRRDPQPRRKFDFDRNSSSTGVRPPSLTSPTNTSVAPGGGSPSWNSLSAPGTPRSSSPHKRPWYPAGHRPSSRDSGGSGADDSSAYVIHPSFRHLFTARAHSSGASDPSRSRQVYRQGPDHRVGGXXXXXXXXXXXXXXXENSGSRPGTVVFSVGGGESSYSGSTKETAVARRSERPSEVEPAAAGRWRGVHFSKAKHNSHEQQRRDTVAGIRGAPDGSSRQHGEERASFSPTDGSSGFGSSSDASPPRPRRNDYRSPREMGNQRSDAGRETVEQEGVPPGSVAAMRGRVRDMQARGRPRRQERGGRVPQADSRRGEGDPRLRSSAVFVGHNEQVLALARCEDILFSASADGTAKAWDTYSQQCLATYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETAQSLNVLDLRSAVRDVVVVGDFLAVATSNPDVEIVELKRMRRHGTLEGHLLAVSALASLEGENLLVSGSHDT---VWDPDTLTCQAVLGGHGGTVGAICTVSWRSQEGHGHAKRAGEEPLIVSGSGDGTARVWGQQGVGDKGEREWTCRAVLEGHSRHGVWAVHGSSVSGAFATGGGDATVKLWAPTTTNNAEHGNEGAERDNLGSGESGHXXXXXXXPQRWELVGGVRGTAGAVGAVLIDEQALVFGTSEALIARFPLQLCMPAR 712
            MLTT IRGNGSWSAAL RGQSHSTVV AA+NS DC+TSPNPYKRRGLLRR DPQP+RKFD DRNSSSTGVRPPSLTSPT+TSVAPGGGSPSWNSLSAPGTPRS+SP KRPWYPA  RPSSRD+G SGADDS AYV+HPSFRHLFT RAHSS A+DPSRSRQVY QGP H   G               ENSG RPGT VFSVGG + SYS STKET VARRSERP EVEPA AGRWRGVHFSKAKH+  EQQRRDT  GI  APD SSRQ G ERASFSPTD  SGFGS SDASP R R ND+RSPREMG QR   GRETVEQEG P  +VAAMRGRVRDMQAR RPRRQERGGR+P ADSRRGEGDP+LRSSAVF+GH+EQVLALARCEDILFSASADGTAKAWDT SQQCLATYK              XXXXXXXXXXXXXXXXETAQSL+VLDLRSAVRDVV+VGDFLAVATSNP +EIVELKRMRRHGTLEGHLLAVSALASLEGENLLVSGSHDT   VWDPDTLT +AVLGGHGGTVGAICTVSW  Q GH HAKRA EE LIVSGSGDGTARVWGQQGVGDKG+REWTCRAVLEGH RHGVWAV+GSS+SGAFATGGGDATVKLWAPTTTNNAEHGNE AER NLGSGES H XXXXXX   WELVGGVRGTAGAVGAVLIDEQALVFGTSEALIARFPLQLCMPAR
Sbjct:    1 MLTTAIRGNGSWSAALGRGQSHSTVVAAANNSSDCSTSPNPYKRRGLLRRIDPQPQRKFDIDRNSSSTGVRPPSLTSPTSTSVAPGGGSPSWNSLSAPGTPRSNSPSKRPWYPASRRPSSRDNGESGADDS-AYVVHPSFRHLFTERAHSSSANDPSRSRQVYSQGPHHGASGGGVSGG---------ENSGRRPGTAVFSVGGWDPSYSSSTKETTVARRSERPGEVEPATAGRWRGVHFSKAKHSPPEQQRRDTTTGIGSAPDASSRQRGGERASFSPTDRWSGFGSKSDASPARLRSNDHRSPREMGGQRPYVGRETVEQEGAPLKTVAAMRGRVRDMQARRRPRRQERGGRMPPADSRRGEGDPKLRSSAVFIGHSEQVLALARCEDILFSASADGTAKAWDTCSQQCLATYKGHHGAVWGMQVTGRXXXXXXXXXXXXXXXXETAQSLSVLDLRSAVRDVVMVGDFLAVATSNPGIEIVELKRMRRHGTLEGHLLAVSALASLEGENLLVSGSHDTFIRVWDPDTLTSKAVLGGHGGTVGAICTVSW-PQGGHDHAKRAAEEALIVSGSGDGTARVWGQQGVGDKGQREWTCRAVLEGH-RHGVWAVYGSSLSGAFATGGGDATVKLWAPTTTNNAEHGNEEAERGNLGSGESRHQXXXXXXX--WELVGGVRGTAGAVGAVLIDEQALVFGTSEALIARFPLQLCMPAR 701          
BLAST of mRNA_E-fasciculatus_F_contig1572.3950.1 vs. uniprot
Match: A0A6H5JEV4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV4_9PHAE)

HSP 1 Score: 546 bits (1407), Expect = 5.250e-187
Identity = 312/407 (76.66%), Postives = 332/407 (81.57%), Query Frame = 0
Query:    1 MLTTTIRGNGSWSAALDRGQSHSTVVTAAHNSPDCATSPNPYKRRGLLRRRDPQPRRKFDFDRNSSSTGVRPPSLTSPTNTSVAPGGGSPSWNSLSAPGTPRSSSPHKRPWYPAGHRPSSRDSGGSGADDSSAYVIHPSFRHLFTARAHSSGASDPSRSRQVYRQGPDH---RVGGXXXXXXXXXXXXXXXENSGSRPGTVVFSVGGGESSYSGSTKETAVARRSERPSEVEPAAAGRWRGVHFSKAKHNSHEQQRRDTVA-GIRGAPDGSSRQHGEERASFSPTDGSSGFGSSSDASPPRPRRNDYRSPREMGNQRSDAGRETVEQEGVPPGSVAAMRGRVRDMQARGRPRRQERGGRVPQADSRRGEGDPRLRSSAVFVGHNEQVLALARCEDILFSASADGTAK 403
            MLTT IRGN SWSA L RGQS+ST V AA++SPDC+ S NPYKRRGLLRRRDPQP+RKFD DRNSSS GVRPP LTSP +TSVAPGG SPSWNSLS PGTPRS+SP+KRPWYPAG RPSSRDSG SGADDS AYV+HPSFRHLFT  AHSSGA+DPSRSRQVY QGP H   R GG XX            ENSG RPGT VFSVGGG+ SYS ST ET VAR+SER  EVEPAAAGRWRG HFSKA+HN  EQQ R+T   GI  APD SSRQ G ERASFSPT  SS FGS SDASPPRPRRND+RSPREMG QR  A RETVEQ G P   VAAMR RVRDMQARGRPRR+ERGGR+P ADSRRGEGDPRLRSS VF+GH++QVLALAR EDILFSASADGTAK
Sbjct:    1 MLTTAIRGNQSWSAPLSRGQSYSTAVAAANDSPDCSMSSNPYKRRGLLRRRDPQPQRKFDIDRNSSSAGVRPPLLTSPVSTSVAPGGESPSWNSLSVPGTPRSNSPNKRPWYPAGRRPSSRDSGESGADDS-AYVVHPSFRHLFTESAHSSGANDPSRSRQVYSQGPHHGSSRGGGSXX------------ENSGRRPGTAVFSVGGGDPSYSSSTTETTVARQSERSGEVEPAAAGRWRGAHFSKAEHNPREQQHRNTTTTGIGSAPDASSRQRGGERASFSPTGRSSVFGSESDASPPRPRRNDHRSPREMGGQRPYAERETVEQGGAPLEPVAAMRSRVRDMQARGRPRRKERGGRMPPADSRRGEGDPRLRSS-VFIGHSKQVLALARREDILFSASADGTAK 393          
BLAST of mRNA_E-fasciculatus_F_contig1572.3950.1 vs. uniprot
Match: A0A6A5BUZ3_NAEFO (Guanine nucleotide-binding protein subunit beta-like protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BUZ3_NAEFO)

HSP 1 Score: 58.9 bits (141), Expect = 3.370e-5
Identity = 46/140 (32.86%), Postives = 68/140 (48.57%), Query Frame = 0
Query:  494 TLEGHLLAVSALASLEGENLLVSGSHDT---VWDPDTLTCQAVLGGHGGTVGAICTVSWRSQEGHGHAKRAGEEPLIVSGSGDGTARVWGQQGVGDKGEREWTCRAVLEGHSRHGVWAVHGSSVSGAFATGGGDATVKLW 630
            TL GH  +++A+  L G   ++SGS D    VWD  + +    L GH G V ++ +      E   + +   +   +VSGSGDGT R+W         + E  C  VL+GH   GV  V  S ++G   +   D TVK+W
Sbjct:  627 TLRGHTKSITAI-HLIGSRFVISGSADCTVRVWDLHSRSLIQTLTGHTGWVRSVTSDFSDVSESDEYERLIDDLKFVVSGSGDGTIRLWDVSNP----DVEEKCVKVLKGHEG-GVTCVK-SDINGVIVSSSVDKTVKVW 759          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1572.3950.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LC03_ECTSI0.000e+082.94HET-R n=1 Tax=Ectocarpus siliculosus TaxID=2880 Re... [more]
A0A6H5JEV4_9PHAE5.250e-18776.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A5BUZ3_NAEFO3.370e-532.86Guanine nucleotide-binding protein subunit beta-li... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 433..447
score: 43.36
coord: 393..407
score: 40.0
coord: 567..581
score: 36.3
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 591..631
e-value: 0.0029
score: 26.9
coord: 488..524
e-value: 1.8
score: 15.4
coord: 369..406
e-value: 0.0082
score: 25.3
coord: 527..580
e-value: 0.0011
score: 28.3
coord: 409..446
e-value: 4.1E-8
score: 42.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 411..446
e-value: 1.3E-6
score: 29.0
coord: 592..630
e-value: 0.027
score: 15.3
coord: 529..579
e-value: 0.027
score: 15.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 376..415
score: 10.976
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 416..455
score: 13.249
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 464..690
e-value: 3.1E-22
score: 80.9
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 340..463
e-value: 3.3E-22
score: 80.8
NoneNo IPR availablePANTHERPTHR44489FAMILY NOT NAMEDcoord: 522..634
coord: 188..548
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 393..407
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 433..447
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 376..640
score: 20.197
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 369..634

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1572contigE-fasciculatus_F_contig1572:8762..12241 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1572.3950.1mRNA_E-fasciculatus_F_contig1572.3950.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1572 8762..12241 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1572.3950.1 ID=prot_E-fasciculatus_F_contig1572.3950.1|Name=mRNA_E-fasciculatus_F_contig1572.3950.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=713bp
MLTTTIRGNGSWSAALDRGQSHSTVVTAAHNSPDCATSPNPYKRRGLLRR
RDPQPRRKFDFDRNSSSTGVRPPSLTSPTNTSVAPGGGSPSWNSLSAPGT
PRSSSPHKRPWYPAGHRPSSRDSGGSGADDSSAYVIHPSFRHLFTARAHS
SGASDPSRSRQVYRQGPDHRVGGGGGGGGGDGGGGGGGENSGSRPGTVVF
SVGGGESSYSGSTKETAVARRSERPSEVEPAAAGRWRGVHFSKAKHNSHE
QQRRDTVAGIRGAPDGSSRQHGEERASFSPTDGSSGFGSSSDASPPRPRR
NDYRSPREMGNQRSDAGRETVEQEGVPPGSVAAMRGRVRDMQARGRPRRQ
ERGGRVPQADSRRGEGDPRLRSSAVFVGHNEQVLALARCEDILFSASADG
TAKAWDTYSQQCLATYKGHRGAVWGMQVTGRTLITGSADGTVRFWDIETA
QSLNVLDLRSAVRDVVVVGDFLAVATSNPDVEIVELKRMRRHGTLEGHLL
AVSALASLEGENLLVSGSHDTVWDPDTLTCQAVLGGHGGTVGAICTVSWR
SQEGHGHAKRAGEEPLIVSGSGDGTARVWGQQGVGDKGEREWTCRAVLEG
HSRHGVWAVHGSSVSGAFATGGGDATVKLWAPTTTNNAEHGNEGAERDNL
GSGESGHHHHQQQQPQRWELVGGVRGTAGAVGAVLIDEQALVFGTSEALI
ARFPLQLCMPAR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep