prot_E-fasciculatus_F_contig10491.394.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10491.394.1
Unique Nameprot_E-fasciculatus_F_contig10491.394.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length254
Homology
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BLAST of mRNA_E-fasciculatus_F_contig10491.394.1 vs. uniprot
Match: A0A6H5KFW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFW4_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 3.990e-109
Identity = 198/236 (83.90%), Postives = 209/236 (88.56%), Query Frame = 0 
Query:    1 RKRKGRGGEEGVPAADDDLA---VGGAAAAGEGESMSPLPSEKSSSRRARRPPTLVPTKGIVVAKAMGVTGLALAELMQYK------EYASNKVRELGLESGEAVDATVLEGRAYPHLDAMRYRLNLLQTLVCATSHVITPGQADGLWLALVGRAVSTAELDSSFQALLGLGREAPEGLAALAGTFFERMCCQGGGPAAGNGHCRGVQGGAAVAVAVAPDVMAVDGEATGGGIRDG 227
            RKR+ RGGEEGVP A+DDLA   V  A+AAGEGES SP  SEK SSRRARRPPTLVPTKGIVVAKAMGVTGLALAELMQYK      EYASNKVRELGLESGEAVDA VLEGRAYPHLDAMRYRLNLLQTLVCATSHVITPGQA+GLWLALV RAVSTAELDSSFQALLGLGREAPEGLAALAGTFFERMCCQGGGPA GNGHCRG+QGG+    A  PD++AVDG+ATGG +R+G
Sbjct: 1114 RKRERRGGEEGVPVANDDLASVSVAPASAAGEGESTSPPASEKFSSRRARRPPTLVPTKGIVVAKAMGVTGLALAELMQYKASQWSLEYASNKVRELGLESGEAVDAAVLEGRAYPHLDAMRYRLNLLQTLVCATSHVITPGQAEGLWLALVERAVSTAELDSSFQALLGLGREAPEGLAALAGTFFERMCCQGGGPAVGNGHCRGMQGGSTTVPA--PDLLAVDGKATGGRVRNG 1347
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BLAST of mRNA_E-fasciculatus_F_contig10491.394.1 vs. uniprot
Match: D7FK75_ECTSI (Ubiquitin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK75_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 1.020e-48
Identity = 94/107 (87.85%), Postives = 98/107 (91.59%), Query Frame = 0 
Query:  112 MRYRLNLLQTLVCATSHVITPGQADGLWLALVGRAVSTAELDSSFQALLGLGREAPEGLAALAGTFFERMCCQGGGPAAGNGHCRGVQGGAAVAVAVAPDVMAVDGE 218
            MRYRLNLLQTLVCATSHVITPGQA+GLWLALV RAVSTAELDSSFQALLGLGREAPEGLAALAGTFFERMCCQGGGPAAGNGHCRGV+GG+       PD+MAVD E
Sbjct:    1 MRYRLNLLQTLVCATSHVITPGQAEGLWLALVERAVSTAELDSSFQALLGLGREAPEGLAALAGTFFERMCCQGGGPAAGNGHCRGVRGGSTTVAT--PDLMAVDAE 105
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10491.394.1 vs. uniprot
Match: D7FK74_ECTSI (Similar to ubiquitin specific protease 34 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK74_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 8.940e-7
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0 
Query:   49 PPTLVPTKGIVVAKAMGVTGLALAELMQYK 78
            PPTLVPTKGIVVAKAMGVTGLALAELMQYK
Sbjct: 1175 PPTLVPTKGIVVAKAMGVTGLALAELMQYK 1204
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10491.394.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KFW4_9PHAE3.990e-10983.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK75_ECTSI1.020e-4887.85Ubiquitin domain-containing protein n=1 Tax=Ectoca... [more]
D7FK74_ECTSI8.940e-7100.00Similar to ubiquitin specific protease 34 n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10491contigE-fasciculatus_F_contig10491:1523..3120 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10491.394.1mRNA_E-fasciculatus_F_contig10491.394.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10491 1523..3120 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10491.394.1 ID=prot_E-fasciculatus_F_contig10491.394.1|Name=mRNA_E-fasciculatus_F_contig10491.394.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=254bp
RKRKGRGGEEGVPAADDDLAVGGAAAAGEGESMSPLPSEKSSSRRARRPP
TLVPTKGIVVAKAMGVTGLALAELMQYKEYASNKVRELGLESGEAVDATV
LEGRAYPHLDAMRYRLNLLQTLVCATSHVITPGQADGLWLALVGRAVSTA
ELDSSFQALLGLGREAPEGLAALAGTFFERMCCQGGGPAAGNGHCRGVQG
GAAVAVAVAPDVMAVDGEATGGGIRDGGGSMTTTPDSSSSSRSKSAAAAA
KVSD
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