mRNA_E-fasciculatus_F_contig15710.3945.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig15710.3945.1
Unique NamemRNA_E-fasciculatus_F_contig15710.3945.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Match: A0A6H5JW07_9PHAE (UTP15_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JW07_9PHAE)

HSP 1 Score: 357 bits (917), Expect = 2.550e-119
Identity = 195/206 (94.66%), Postives = 197/206 (95.63%), Query Frame = 1
Query:    1 VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSGRIGGPVGSDGGPRSVRTGTARYFNRGKTEGAAEGDVKVRLFVCVSIASYDESLRKFRFGEALDRGLATGSPLVVAALLEALTERGALEKALSGRDAAGLEPVVAYLAKHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALGLFAKLRAQVK 618
            VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSGRIGGPVGSDGGPRSVRTGTARYFNRGKTEGA EGDVKV      +IASYDESLRKFRF EALDRGLATGSPLVVAALLEALTERGALEKALSGRDAAGLEPVVAYLA+HLTNPRHTEQLIAVTSSVLDMYGDVVASSPKAL LFAKLRAQVK
Sbjct:  286 VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSGRIGGPVGSDGGPRSVRTGTARYFNRGKTEGAGEGDVKVASRKSRAIASYDESLRKFRFREALDRGLATGSPLVVAALLEALTERGALEKALSGRDAAGLEPVVAYLARHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALSLFAKLRAQVK 491          
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Match: C1E939_MICCC (UTP15_C domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E939_MICCC)

HSP 1 Score: 152 bits (385), Expect = 9.670e-41
Identity = 90/210 (42.86%), Postives = 125/210 (59.52%), Query Frame = 1
Query:    1 VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSGRIG--GPVGSDGGPRSVRTGTARYFNRGKTEGAAEGDVKVRLFVCVSIASYDESLRKFRFGEALDRGLATGSPLVVAALLEALTERGALEKALSGRDAAGLEPVVAYLAKHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALGLFAKLRAQVKLT 624
            V H  KY  PVLA+AL+PD ++L   T ++ L+IRRR    + AL              GP G    PR +  G+ +YF RG    AAEGD KV+    V + ++D +L++FRF EALD  LA G P V+AA+++ +   GAL KAL+GRDAA L+PV+ Y+ KH+ NPRHT QL+ V   VLD+YG  V +S +       +R +V +T
Sbjct:  200 VTHSAKYPGPVLAVALSPDANALAVGTANKLLSIRRRTKPRSHALGGXXXXXDSGFHKVGPSGRRKAPRRLDAGSWQYFIRGMNAKAAEGDFKVQRLRSVRLQAHDRALKRFRFTEALDASLAGGRPEVIAAVIDEIAAHGALSKALAGRDAAALQPVLRYVMKHIGNPRHTRQLVHVAGMVLDIYGGSVGASREVDAALRLIRERVAVT 409          
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Match: A0A7S0KG88_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KG88_MICPS)

HSP 1 Score: 154 bits (389), Expect = 3.450e-40
Identity = 90/208 (43.27%), Postives = 125/208 (60.10%), Query Frame = 1
Query:    1 VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSGRIGGPVGSDGGPRSVRTGTARYFNRGKTEGAAEGDVKVRLFVCVSIASYDESLRKFRFGEALDRGLATGSPLVVAALLEALTERGALEKALSGRDAAGLEPVVAYLAKHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALGLFAKLRAQVKLT 624
            V H  KY  PVLA+AL+PD ++L   T ++ L+IRRR    + AL            GP G    PR +  G+ +YF RG    AAEGD KV+    V + ++D +L++FRF EALD  LA G P V+AA+++ +   GAL KAL+GRDAA L+PV+ Y+ KH+ NPRHT QL+ V   VLD+YG  V +S +       +R +V +T
Sbjct:  397 VTHSAKYPGPVLAVALSPDANALAVGTANKLLSIRRRTKPRSHALGGGGGDPGFHKVGPSGRRKAPRRLDAGSWQYFIRGMNAKAAEGDFKVKRLRSVRLQAHDRALKRFRFTEALDASLAGGRPEVIAAVIDEIAAHGALSKALAGRDAAALQPVLRYVMKHIGNPRHTRQLVHVAGMVLDIYGGSVGASREVDAALRLIRERVAVT 604          
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Match: A0A0L0FNH1_9EUKA (UTP15_C domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FNH1_9EUKA)

HSP 1 Score: 129 bits (325), Expect = 1.170e-31
Identity = 77/205 (37.56%), Postives = 118/205 (57.56%), Query Frame = 1
Query:    1 VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSGRIGGPVGSDGGPRSVRTGTARYFNRGKTEGAAEGDVKVRLFVCVSIASYDESLRKFRFGEALDRGLATGSPLVVAALLEALTERGALEKALSGRDAAGLEPVVAYLAKHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALGLFAKLRAQV 615
            VVH +KY APV++LA++P+++ LV    D  L+IR +          + +   G  G     D   ++ R GT +YF RG+   A+E D +V +     +A YD  ++KF++G ALD  L  G P+++ +L+E L  R  L+ A+SGRD A L P++ +L KH+ NPR++  LI VT+ VLD+Y  V+  S     L  KLR +V
Sbjct:  284 VVHSIKYSAPVMSLAMSPEDTHLVVGMADGTLSIRHKP--------NKSITNKGLAG-----DKAKKAPRGGTQQYFKRGQDTKASEDDFRVEVRRKKGLAEYDVFMKKFQYGLALDAALVHGRPVIIVSLIEELAHRDGLKIAISGRDEAALTPLLVFLLKHVNNPRYSSLLIEVTNMVLDVYARVLGKSQAIDELVLKLRNKV 475          
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Match: A0A7S3XXP8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXP8_HETAK)

HSP 1 Score: 119 bits (298), Expect = 1.770e-30
Identity = 71/151 (47.02%), Postives = 93/151 (61.59%), Query Frame = 1
Query:  172 GPVGSDGGPRSVRTGTARYFNRGKTEGAAEGDVKVRLFVCVS--IASYDESLRKFRFGEALDRGLATGSPLVVAALLEALTERGALEKALSGRDAAGLEPVVAYLAKHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALGLFAKLRAQVK 618
            G   +DG   ++R G+A YF RG    AA GDV V         +  Y+ +L+KFR+GEALD GL T +PLVVAALLE L +R  L  ALSGR    LEPV+A+L +++  P++T  L+ V   VLD+YG V+  S     LF KLRAQV+
Sbjct:    5 GAAAADG--EALRGGSAAYFRRGHAAPAAPGDVDVAAAAARGPRLRPYERALKKFRYGEALDAGLRTRNPLVVAALLEELRQRQGLGIALSGRGEEALEPVLAFLNRYVAQPKYTPLLVEVCQKVLDVYGGVLGESEAIDELFLKLRAQVR 153          
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Match: A0A433PXW0_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PXW0_9FUNG)

HSP 1 Score: 127 bits (318), Expect = 3.490e-30
Identity = 83/207 (40.10%), Postives = 117/207 (56.52%), Query Frame = 1
Query:    1 VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSGRIGGPVGSDGGPRSVRTGTARYFNRGKTEGAAEGDVKVRLFVCVSIASYDESLRKFRFGEALDRGLATGSP-LVVAALLEALTERGALEKALSGRDAAGLEPVVAYLAKHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALGLFAKLRAQVK 618
            VVH  KY APVL++AL+PD++ LVA  T   L+IR+R +R  A +A R++ +                +R GT R+F RG+     + D KV       +  YD  L+ F++G ALD  L T  P L V +L + L  R  L +AL+GRD   L+PVV +L KH+ NPR+T  LI V  +V++MY  V+  SP    LF +LR +VK
Sbjct:  296 VVHSAKYPAPVLSVALSPDDTHLVAGMTGGLLSIRQRQVR-TAEIATRQVEED--------------YIRGGTYRHFVRGQNNVGVQDDFKVESRRKKHLKDYDRYLKSFQYGNALDAVLRTSQPALTVVSLFQELIHRDGLRQALAGRDDISLQPVVQFLVKHVNNPRYTGLLIDVAEAVIEMYTPVLGQSPLIDELFHRLREKVK 487          
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Match: A0A835Z7W5_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7W5_9STRA)

HSP 1 Score: 122 bits (307), Expect = 4.280e-29
Identity = 86/209 (41.15%), Postives = 119/209 (56.94%), Query Frame = 1
Query:    1 VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAAL--AEREMAKSGRIGGPVGSDGGPRSVRTGTARYFNRGKTEGAAEG--DVKVRLFVCVSIASYDESLRKFRFGEALDRGLATGSPLVVAALLEALTERGALEKALSGRDAAGLEPVVAYLAKHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALGLFAKLRAQV 615
            V+H L++QAP+L+LAL+ D   + A T D ALT RRR    AAA+  AER +                 + + GT  Y  RG +  A  G  D  V       +  YD+SLRKFR+ EALD  LAT SP+VVA++LE L +R  L  AL+GRD   LEP++A+LA+++ +PR+   LI VT +V D Y   +  S     LFA+L+ Q+
Sbjct:  283 VMHGLRFQAPLLSLALSADGVQMAAGTADCALTQRRRPAPSAAAVRRAERPLY----------------APQRGTPAYLKRG-SRNAVPGLDDTLVEQKRHKPLQPYDQSLRKFRYQEALDLALATRSPIVVASVLEELIQRRGLNIALAGRDEVTLEPILAFLARYIASPRYAPLLIDVTHAVADAYASALGESEGVDELFARLQRQI 474          
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Match: A0A1Y2GYS6_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GYS6_9FUNG)

HSP 1 Score: 122 bits (305), Expect = 9.850e-29
Identity = 79/208 (37.98%), Postives = 117/208 (56.25%), Query Frame = 1
Query:    1 VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSGRIGGPVGSDGGPRSVRTGTARYFNRGKTEGAAEGDVKVRLFVCVSIASYDESLRKFRFGEALDRGLATGSPLVVA-ALLEALTERGALEKALSGRDAAGLEPVVAYLAKHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALGLFAKLRAQVKL 621
            VVH +KY APVL++AL+PD++ LVA      L+IR+R ++ A     R   +                +R G+ +YF RG+ + A EGD  V       +  YD  L+ F++G ALD  L T  P V   +L++ L  R  L +ALSGRD   LEP+  +L +++ NPR+T  L+ VT+ ++DMY  V+  SP    LF +LRA+VK+
Sbjct:  283 VVHSVKYPAPVLSVALSPDDTHLVAGMAGGLLSIRQRVVKTAEVQTRRAQEEQ---------------IRAGSYKYFVRGQKK-ANEGDFTVETQRKRRLREYDRYLKAFQYGNALDACLRTNQPAVTTVSLIQELVHRDGLRQALSGRDDISLEPLAQFLVRNINNPRYTSILVDVTTIMIDMYTAVLGQSPLIDELFMRLRAKVKM 474          
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Match: A0A433QWU1_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QWU1_9FUNG)

HSP 1 Score: 121 bits (303), Expect = 1.840e-28
Identity = 80/207 (38.65%), Postives = 117/207 (56.52%), Query Frame = 1
Query:    1 VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSGRIGGPVGSDGGPRSVRTGTARYFNRGKTEGAAEGDVKVRLFVCVSIASYDESLRKFRFGEALDRGLATGSPLVVA-ALLEALTERGALEKALSGRDAAGLEPVVAYLAKHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALGLFAKLRAQVK 618
            VVH +KY APVL++AL+PD++ LVA  T   L+IR+R +R A  +A R++ +                ++ GT +YF RG+    A+ D KV       + +YD  LR F++G ALD  L T  P ++  +L + L  R  L +ALSGRD   LEP+V +L  H+ NP++T  LI V + V+DMY  V+  S     LF +L  +VK
Sbjct:  296 VVHSVKYPAPVLSVALSPDDTHLVAGMTGGLLSIRQRQVR-ATEIATRQVEED--------------YIQGGTYKYFVRGQNNVGAQDDFKVESKRKKRLQNYDRFLRGFQYGNALDVVLRTNQPAIITVSLFQELIHRDGLRQALSGRDDISLEPIVQFLVTHVNNPKYTNLLIDVANVVIDMYSPVLGQSQFIDELFHRLCDKVK 487          
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Match: A0A261XUW5_9FUNG (UTP15_C domain-containing protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XUW5_9FUNG)

HSP 1 Score: 120 bits (302), Expect = 2.120e-28
Identity = 73/206 (35.44%), Postives = 116/206 (56.31%), Query Frame = 1
Query:    1 VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSGRIGGPVGSDGGPRSVRTGTARYFNRGKTEGAAEGDVKVRLFVCVSIASYDESLRKFRFGEALDRGLATGSP-LVVAALLEALTERGALEKALSGRDAAGLEPVVAYLAKHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALGLFAKLRAQV 615
            VVH +KY AP+L++AL+PD++ LV    +  L+IR+R L+ A   ++++                   +RTG+ R+F RG+T      D  V       +A YD  L+KF +G ALD  L +  P +++ +LL+ L  R  L +ALSGRD   LEP+V ++ KH+ NP+++  LI VT  +L++Y  V+  SP    L  +L+ +V
Sbjct:  283 VVHSVKYPAPILSVALSPDDTHLVTGMANGLLSIRQRQLKAAETPSKKDTDDY---------------LRTGSYRFFIRGQTYTGNSDDFTVESKRKRRLADYDRLLKKFEYGNALDAALRSSHPPVIIVSLLQELIHRDGLSQALSGRDDISLEPIVYFIVKHVDNPKYSNLLIDVTECILELYASVLGQSPLVDDLITRLQTKV 473          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JW07_9PHAE2.550e-11994.66UTP15_C domain-containing protein n=2 Tax=Ectocarp... [more]
C1E939_MICCC9.670e-4142.86UTP15_C domain-containing protein n=1 Tax=Micromon... [more]
A0A7S0KG88_MICPS3.450e-4043.27Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A0L0FNH1_9EUKA1.170e-3137.56UTP15_C domain-containing protein n=1 Tax=Sphaerof... [more]
A0A7S3XXP8_HETAK1.770e-3047.02Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A433PXW0_9FUNG3.490e-3040.10WD40-repeat-containing domain protein n=1 Tax=Endo... [more]
A0A835Z7W5_9STRA4.280e-2941.15WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A1Y2GYS6_9FUNG9.850e-2937.98WD40-repeat-containing domain protein n=1 Tax=Lobo... [more]
A0A433QWU1_9FUNG1.840e-2838.65WD40-repeat-containing domain protein n=1 Tax=Jimg... [more]
A0A261XUW5_9FUNG2.120e-2835.44UTP15_C domain-containing protein n=1 Tax=Bifigura... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15710contigE-fasciculatus_F_contig15710:34..1870 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score150.2
Seed ortholog evalue1e-33
Seed eggNOG ortholog296587.XP_002503005.1
KEGG koko:K14549
KEGG Pathwayko03008,map03008
EggNOG free text desc.U3 small nucleolar RNA-associated protein
EggNOG OGs37JF9@33090,KOG0310@1,KOG0310@2759
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-17_002790.1
COG Functional cat.S
Best tax levelViridiplantae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009
Hectar predicted targeting categoryother localisation
Exons3
Model size624
Cds size615
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15710.3945.1prot_E-fasciculatus_F_contig15710.3945.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig15710 43..1870 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928042.6177416-UTR-E-fasciculatus_F_contig15710:33..421622928042.6177416-UTR-E-fasciculatus_F_contig15710:33..42Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig15710 34..42 +
1695995800.8346539-UTR-E-fasciculatus_F_contig15710:33..421695995800.8346539-UTR-E-fasciculatus_F_contig15710:33..42Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig15710 34..42 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928042.6762667-CDS-E-fasciculatus_F_contig15710:42..3281622928042.6762667-CDS-E-fasciculatus_F_contig15710:42..328Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15710 43..328 +
1695995800.8506289-CDS-E-fasciculatus_F_contig15710:42..3281695995800.8506289-CDS-E-fasciculatus_F_contig15710:42..328Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15710 43..328 +
1622928042.6872396-CDS-E-fasciculatus_F_contig15710:881..10711622928042.6872396-CDS-E-fasciculatus_F_contig15710:881..1071Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15710 882..1071 +
1695995800.8708818-CDS-E-fasciculatus_F_contig15710:881..10711695995800.8708818-CDS-E-fasciculatus_F_contig15710:881..1071Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15710 882..1071 +
1622928042.6988273-CDS-E-fasciculatus_F_contig15710:1731..18701622928042.6988273-CDS-E-fasciculatus_F_contig15710:1731..1870Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15710 1732..1870 +
1695995800.8835144-CDS-E-fasciculatus_F_contig15710:1731..18701695995800.8835144-CDS-E-fasciculatus_F_contig15710:1731..1870Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15710 1732..1870 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig15710.3945.1

>prot_E-fasciculatus_F_contig15710.3945.1 ID=prot_E-fasciculatus_F_contig15710.3945.1|Name=mRNA_E-fasciculatus_F_contig15710.3945.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=205bp
MLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKS
GRIGGPVGSDGGPRSVRTGTARYFNRGKTEGAAEGDVKVRLFVCVSIASY
DESLRKFRFGEALDRGLATGSPLVVAALLEALTERGALEKALSGRDAAGL
EPVVAYLAKHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALGLFAKLRA
QVKLT
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mRNA from alignment at E-fasciculatus_F_contig15710:34..1870+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig15710.3945.1 ID=mRNA_E-fasciculatus_F_contig15710.3945.1|Name=mRNA_E-fasciculatus_F_contig15710.3945.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1837bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15710:34..1870+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTGGTACACATGCTCAAGTATCAGGCGCCGGTACTGGCCCTGGCCCTGGC TCCCGACAACTCTTCGCTCGTTGCCGCGACCACGGACCGGGCGCTGACGA TTAGGCGAAGGGACCTCCGCCACGCGGCGGCACTGGCGGAGAGGGAGATG GCCAAGTCGGGGAGGATCGGGGGGCCCGTGGGATCAGACGGGGGGCCCCG GTCTGTCCGCACGGGTACGGCGAGGTATTTCAACCGAGGGAAGACGGAGG GGGCCGCGGAAGGCGACGTGAAGGTGAGGTTATTCGTGTGTGTGTGTGTG TGTGTGTGTGCGTTTACGCTGATGGCGGGTTCATGTTTGAGGCGACGAGG CTATCGTGTTTCGTGTGCGAGGGCTGCTGCTGCATCGAGGACATTTTTTC CTCCTTTTCACTGTTGGGGGTTACATTTTTTTGGAGGCCGTGGCGGTCGC TTTGACAACTGTTTGGATGAAATGTGGTCTGTTTAGCGGGAGGTTTTCGC CCTTTTTCCGGGCAGCCTTTTGACTGACCGCTTCACTGTGAAGCCCAAAA AACAATGCACGGCAGTATTTGTTCTTTCAAGAAACCAAGCGACACTGAAA GCAGTCGTACGTTGTGTCTGTAAACTTGTATCAACACACCAAAACACGCC GCATGTGGAGACAAACGCCCTCTTCAACACCCCCTGCTTGGTTAGTGTCT TGACGCGCAATCTGAGGCATGAGTGCGTCCAAAGTTTCATTTTTTTTTCT TGTGTGTGTTGTGCGAGACGCTCTCTCTTCGTGACCCCTTCTCTCCCGCC CCCGCCCCCCGGAAAAAAAAACGCAGGTAGCGGCGAGGAAATCCAGAGCA ATCGCCTCCTACGACGAGTCTCTCCGAAAGTTTCGTTTCGGCGAGGCCCT GGACAGGGGTCTGGCTACGGGAAGCCCCCTCGTGGTGGCCGCGCTGTTGG AGGCGTTGACGGAGAGGGGGGCGTTGGAGAAGGCTCTGTCCGGGAGGGAT GCGGCGGGTCTCGAGCCTGTCGTTGCGTACCTGGCAAAGTGAGTCCCTGT TCATGTGTTGTGCTAAGTCTGGGTTCTCCCCTGTGTGAGGATTTTTCACC ACGATCGACCATTTTCACGGCTAGAGGATGGCGTTTGTTTTTTTCCTCTC TTCCCTGTGTTTTGCTAGGTCTGGGTTCTCCTGTGTGTGAGATTTTTCTC TACGATCGATCGTGGGAACCGGCAGAAAATGAAGCCGCTGAATCTGGAAT TTTCAACGGGACGAAACCACGCGAAAATGCGATGTCACAAACCCGCCAGC GGGGGGTCGCAGAGGAGGAGCTGGCCGCAAAGCGGGGTGTGCTGATTCTG GACTCAGGGTACCCCTGCGAGACCGACGGCACAAACTGCTGCGTACGCGG TTTGTGTTCTTGTTTTCACTTACTCTTTACGAATGTGAAGGCCACAACGA AAACAGCAACGACCACTAATCCTATCTCTTGCCTTCCTAGTGAGGGGCTA TGATGAGGGGCAGGAGCTACAAGTTTTGCCGCTTCAACTGGTGTCGGACC ACAGCACTGTTGCATGAAAGACCTCTGGGAAGTAGCGGTGGTCTCACGGT CACGCCTTCCACGACCGTCGGCCGCATCTCCCAGTCAAGCATATACGGCA GAAGGGATCCCGCCGTACTTAACTACCGCTCATGTTTCTGCGTCGCAGGC ACCTCACGAACCCTCGACATACGGAGCAGCTCATCGCGGTCACGTCGAGC GTGCTGGACATGTATGGGGACGTTGTGGCGTCTTCCCCGAAGGCGCTCGG CCTCTTCGCGAAGCTCAGAGCTCAGGTGAAACTTACG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15710:34..1870+

>mRNA_E-fasciculatus_F_contig15710.3945.1 ID=mRNA_E-fasciculatus_F_contig15710.3945.1|Name=mRNA_E-fasciculatus_F_contig15710.3945.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1230bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15710:34..1870+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCTCAAGTATCAGGCGCCGGTACTGGCCCTGGCCCTGGCTCCCGACAA
CTCTTCGCTCGTTGCCGCGACCACGGACCGGGCGCTGACGATTAGGCGAA
GGGACCTCCGCCACGCGGCGGCACTGGCGGAGAGGGAGATGGCCAAGTCG
GGGAGGATCGGGGGGCCCGTGGGATCAGACGGGGGGCCCCGGTCTGTCCG
CACGGGTACGGCGAGGTATTTCAACCGAGGGAAGACGGAGGGGGCCGCGG
AAGGCGACGTGAAGGTGAGGTTATTCGTGTGTGTGTATGCTCAAGTATCA
GGCGCCGGTACTGGCCCTGGCCCTGGCTCCCGACAACTCTTCGCTCGTTG
CCGCGACCACGGACCGGGCGCTGACGATTAGGCGAAGGGACCTCCGCCAC
GCGGCGGCACTGGCGGAGAGGGAGATGGCCAAGTCGGGGAGGATCGGGGG
GCCCGTGGGATCAGACGGGGGGCCCCGGTCTGTCCGCACGGGTACGGCGA
GGTATTTCAACCGAGGGAAGACGGAGGGGGCCGCGGAAGGCGACGTGAAG
GTGAGGTTATTCGTGTGTGTGTCAATCGCCTCCTACGACGAGTCTCTCCG
AAAGTTTCGTTTCGGCGAGGCCCTGGACAGGGGTCTGGCTACGGGAAGCC
CCCTCGTGGTGGCCGCGCTGTTGGAGGCGTTGACGGAGAGGGGGGCGTTG
GAGAAGGCTCTGTCCGGGAGGGATGCGGCGGGTCTCGAGCCTGTCGTTGC
GTACCTGGCAAACAATCGCCTCCTACGACGAGTCTCTCCGAAAGTTTCGT
TTCGGCGAGGCCCTGGACAGGGGTCTGGCTACGGGAAGCCCCCTCGTGGT
GGCCGCGCTGTTGGAGGCGTTGACGGAGAGGGGGGCGTTGGAGAAGGCTC
TGTCCGGGAGGGATGCGGCGGGTCTCGAGCCTGTCGTTGCGTACCTGGCA
AAGCACCTCACGAACCCTCGACATACGGAGCAGCTCATCGCGGTCACGTC
GAGCGTGCTGGACATGTATGGGGACGTTGTGGCGTCTTCCCCGAAGGCGC
TCGGCCTCTTCGCGAAGCTCAGAGCTCAGGTGAAACTTACGGCACCTCAC
GAACCCTCGACATACGGAGCAGCTCATCGCGGTCACGTCGAGCGTGCTGG
ACATGTATGGGGACGTTGTGGCGTCTTCCCCGAAGGCGCTCGGCCTCTTC
GCGAAGCTCAGAGCTCAGGTGAAACTTACG
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