mRNA_E-fasciculatus_F_contig15710.3945.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Match: A0A6H5JW07_9PHAE (UTP15_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JW07_9PHAE) HSP 1 Score: 357 bits (917), Expect = 2.550e-119 Identity = 195/206 (94.66%), Postives = 197/206 (95.63%), Query Frame = 1
Query: 1 VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSGRIGGPVGSDGGPRSVRTGTARYFNRGKTEGAAEGDVKVRLFVCVSIASYDESLRKFRFGEALDRGLATGSPLVVAALLEALTERGALEKALSGRDAAGLEPVVAYLAKHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALGLFAKLRAQVK 618
VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSGRIGGPVGSDGGPRSVRTGTARYFNRGKTEGA EGDVKV +IASYDESLRKFRF EALDRGLATGSPLVVAALLEALTERGALEKALSGRDAAGLEPVVAYLA+HLTNPRHTEQLIAVTSSVLDMYGDVVASSPKAL LFAKLRAQVK
Sbjct: 286 VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSGRIGGPVGSDGGPRSVRTGTARYFNRGKTEGAGEGDVKVASRKSRAIASYDESLRKFRFREALDRGLATGSPLVVAALLEALTERGALEKALSGRDAAGLEPVVAYLARHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALSLFAKLRAQVK 491
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Match: C1E939_MICCC (UTP15_C domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E939_MICCC) HSP 1 Score: 152 bits (385), Expect = 9.670e-41 Identity = 90/210 (42.86%), Postives = 125/210 (59.52%), Query Frame = 1
Query: 1 VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSGRIG--GPVGSDGGPRSVRTGTARYFNRGKTEGAAEGDVKVRLFVCVSIASYDESLRKFRFGEALDRGLATGSPLVVAALLEALTERGALEKALSGRDAAGLEPVVAYLAKHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALGLFAKLRAQVKLT 624
V H KY PVLA+AL+PD ++L T ++ L+IRRR + AL GP G PR + G+ +YF RG AAEGD KV+ V + ++D +L++FRF EALD LA G P V+AA+++ + GAL KAL+GRDAA L+PV+ Y+ KH+ NPRHT QL+ V VLD+YG V +S + +R +V +T
Sbjct: 200 VTHSAKYPGPVLAVALSPDANALAVGTANKLLSIRRRTKPRSHALGGXXXXXDSGFHKVGPSGRRKAPRRLDAGSWQYFIRGMNAKAAEGDFKVQRLRSVRLQAHDRALKRFRFTEALDASLAGGRPEVIAAVIDEIAAHGALSKALAGRDAAALQPVLRYVMKHIGNPRHTRQLVHVAGMVLDIYGGSVGASREVDAALRLIRERVAVT 409
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Match: A0A7S0KG88_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KG88_MICPS) HSP 1 Score: 154 bits (389), Expect = 3.450e-40 Identity = 90/208 (43.27%), Postives = 125/208 (60.10%), Query Frame = 1
Query: 1 VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSGRIGGPVGSDGGPRSVRTGTARYFNRGKTEGAAEGDVKVRLFVCVSIASYDESLRKFRFGEALDRGLATGSPLVVAALLEALTERGALEKALSGRDAAGLEPVVAYLAKHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALGLFAKLRAQVKLT 624
V H KY PVLA+AL+PD ++L T ++ L+IRRR + AL GP G PR + G+ +YF RG AAEGD KV+ V + ++D +L++FRF EALD LA G P V+AA+++ + GAL KAL+GRDAA L+PV+ Y+ KH+ NPRHT QL+ V VLD+YG V +S + +R +V +T
Sbjct: 397 VTHSAKYPGPVLAVALSPDANALAVGTANKLLSIRRRTKPRSHALGGGGGDPGFHKVGPSGRRKAPRRLDAGSWQYFIRGMNAKAAEGDFKVKRLRSVRLQAHDRALKRFRFTEALDASLAGGRPEVIAAVIDEIAAHGALSKALAGRDAAALQPVLRYVMKHIGNPRHTRQLVHVAGMVLDIYGGSVGASREVDAALRLIRERVAVT 604
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Match: A0A0L0FNH1_9EUKA (UTP15_C domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FNH1_9EUKA) HSP 1 Score: 129 bits (325), Expect = 1.170e-31 Identity = 77/205 (37.56%), Postives = 118/205 (57.56%), Query Frame = 1
Query: 1 VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSGRIGGPVGSDGGPRSVRTGTARYFNRGKTEGAAEGDVKVRLFVCVSIASYDESLRKFRFGEALDRGLATGSPLVVAALLEALTERGALEKALSGRDAAGLEPVVAYLAKHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALGLFAKLRAQV 615
VVH +KY APV++LA++P+++ LV D L+IR + + + G G D ++ R GT +YF RG+ A+E D +V + +A YD ++KF++G ALD L G P+++ +L+E L R L+ A+SGRD A L P++ +L KH+ NPR++ LI VT+ VLD+Y V+ S L KLR +V
Sbjct: 284 VVHSIKYSAPVMSLAMSPEDTHLVVGMADGTLSIRHKP--------NKSITNKGLAG-----DKAKKAPRGGTQQYFKRGQDTKASEDDFRVEVRRKKGLAEYDVFMKKFQYGLALDAALVHGRPVIIVSLIEELAHRDGLKIAISGRDEAALTPLLVFLLKHVNNPRYSSLLIEVTNMVLDVYARVLGKSQAIDELVLKLRNKV 475
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Match: A0A7S3XXP8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXP8_HETAK) HSP 1 Score: 119 bits (298), Expect = 1.770e-30 Identity = 71/151 (47.02%), Postives = 93/151 (61.59%), Query Frame = 1
Query: 172 GPVGSDGGPRSVRTGTARYFNRGKTEGAAEGDVKVRLFVCVS--IASYDESLRKFRFGEALDRGLATGSPLVVAALLEALTERGALEKALSGRDAAGLEPVVAYLAKHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALGLFAKLRAQVK 618
G +DG ++R G+A YF RG AA GDV V + Y+ +L+KFR+GEALD GL T +PLVVAALLE L +R L ALSGR LEPV+A+L +++ P++T L+ V VLD+YG V+ S LF KLRAQV+
Sbjct: 5 GAAAADG--EALRGGSAAYFRRGHAAPAAPGDVDVAAAAARGPRLRPYERALKKFRYGEALDAGLRTRNPLVVAALLEELRQRQGLGIALSGRGEEALEPVLAFLNRYVAQPKYTPLLVEVCQKVLDVYGGVLGESEAIDELFLKLRAQVR 153
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Match: A0A433PXW0_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PXW0_9FUNG) HSP 1 Score: 127 bits (318), Expect = 3.490e-30 Identity = 83/207 (40.10%), Postives = 117/207 (56.52%), Query Frame = 1
Query: 1 VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSGRIGGPVGSDGGPRSVRTGTARYFNRGKTEGAAEGDVKVRLFVCVSIASYDESLRKFRFGEALDRGLATGSP-LVVAALLEALTERGALEKALSGRDAAGLEPVVAYLAKHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALGLFAKLRAQVK 618
VVH KY APVL++AL+PD++ LVA T L+IR+R +R A +A R++ + +R GT R+F RG+ + D KV + YD L+ F++G ALD L T P L V +L + L R L +AL+GRD L+PVV +L KH+ NPR+T LI V +V++MY V+ SP LF +LR +VK
Sbjct: 296 VVHSAKYPAPVLSVALSPDDTHLVAGMTGGLLSIRQRQVR-TAEIATRQVEED--------------YIRGGTYRHFVRGQNNVGVQDDFKVESRRKKHLKDYDRYLKSFQYGNALDAVLRTSQPALTVVSLFQELIHRDGLRQALAGRDDISLQPVVQFLVKHVNNPRYTGLLIDVAEAVIEMYTPVLGQSPLIDELFHRLREKVK 487
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Match: A0A835Z7W5_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7W5_9STRA) HSP 1 Score: 122 bits (307), Expect = 4.280e-29 Identity = 86/209 (41.15%), Postives = 119/209 (56.94%), Query Frame = 1
Query: 1 VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAAL--AEREMAKSGRIGGPVGSDGGPRSVRTGTARYFNRGKTEGAAEG--DVKVRLFVCVSIASYDESLRKFRFGEALDRGLATGSPLVVAALLEALTERGALEKALSGRDAAGLEPVVAYLAKHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALGLFAKLRAQV 615
V+H L++QAP+L+LAL+ D + A T D ALT RRR AAA+ AER + + + GT Y RG + A G D V + YD+SLRKFR+ EALD LAT SP+VVA++LE L +R L AL+GRD LEP++A+LA+++ +PR+ LI VT +V D Y + S LFA+L+ Q+
Sbjct: 283 VMHGLRFQAPLLSLALSADGVQMAAGTADCALTQRRRPAPSAAAVRRAERPLY----------------APQRGTPAYLKRG-SRNAVPGLDDTLVEQKRHKPLQPYDQSLRKFRYQEALDLALATRSPIVVASVLEELIQRRGLNIALAGRDEVTLEPILAFLARYIASPRYAPLLIDVTHAVADAYASALGESEGVDELFARLQRQI 474
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Match: A0A1Y2GYS6_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GYS6_9FUNG) HSP 1 Score: 122 bits (305), Expect = 9.850e-29 Identity = 79/208 (37.98%), Postives = 117/208 (56.25%), Query Frame = 1
Query: 1 VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSGRIGGPVGSDGGPRSVRTGTARYFNRGKTEGAAEGDVKVRLFVCVSIASYDESLRKFRFGEALDRGLATGSPLVVA-ALLEALTERGALEKALSGRDAAGLEPVVAYLAKHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALGLFAKLRAQVKL 621
VVH +KY APVL++AL+PD++ LVA L+IR+R ++ A R + +R G+ +YF RG+ + A EGD V + YD L+ F++G ALD L T P V +L++ L R L +ALSGRD LEP+ +L +++ NPR+T L+ VT+ ++DMY V+ SP LF +LRA+VK+
Sbjct: 283 VVHSVKYPAPVLSVALSPDDTHLVAGMAGGLLSIRQRVVKTAEVQTRRAQEEQ---------------IRAGSYKYFVRGQKK-ANEGDFTVETQRKRRLREYDRYLKAFQYGNALDACLRTNQPAVTTVSLIQELVHRDGLRQALSGRDDISLEPLAQFLVRNINNPRYTSILVDVTTIMIDMYTAVLGQSPLIDELFMRLRAKVKM 474
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Match: A0A433QWU1_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QWU1_9FUNG) HSP 1 Score: 121 bits (303), Expect = 1.840e-28 Identity = 80/207 (38.65%), Postives = 117/207 (56.52%), Query Frame = 1
Query: 1 VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSGRIGGPVGSDGGPRSVRTGTARYFNRGKTEGAAEGDVKVRLFVCVSIASYDESLRKFRFGEALDRGLATGSPLVVA-ALLEALTERGALEKALSGRDAAGLEPVVAYLAKHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALGLFAKLRAQVK 618
VVH +KY APVL++AL+PD++ LVA T L+IR+R +R A +A R++ + ++ GT +YF RG+ A+ D KV + +YD LR F++G ALD L T P ++ +L + L R L +ALSGRD LEP+V +L H+ NP++T LI V + V+DMY V+ S LF +L +VK
Sbjct: 296 VVHSVKYPAPVLSVALSPDDTHLVAGMTGGLLSIRQRQVR-ATEIATRQVEED--------------YIQGGTYKYFVRGQNNVGAQDDFKVESKRKKRLQNYDRFLRGFQYGNALDVVLRTNQPAIITVSLFQELIHRDGLRQALSGRDDISLEPIVQFLVTHVNNPKYTNLLIDVANVVIDMYSPVLGQSQFIDELFHRLCDKVK 487
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Match: A0A261XUW5_9FUNG (UTP15_C domain-containing protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XUW5_9FUNG) HSP 1 Score: 120 bits (302), Expect = 2.120e-28 Identity = 73/206 (35.44%), Postives = 116/206 (56.31%), Query Frame = 1
Query: 1 VVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSGRIGGPVGSDGGPRSVRTGTARYFNRGKTEGAAEGDVKVRLFVCVSIASYDESLRKFRFGEALDRGLATGSP-LVVAALLEALTERGALEKALSGRDAAGLEPVVAYLAKHLTNPRHTEQLIAVTSSVLDMYGDVVASSPKALGLFAKLRAQV 615
VVH +KY AP+L++AL+PD++ LV + L+IR+R L+ A ++++ +RTG+ R+F RG+T D V +A YD L+KF +G ALD L + P +++ +LL+ L R L +ALSGRD LEP+V ++ KH+ NP+++ LI VT +L++Y V+ SP L +L+ +V
Sbjct: 283 VVHSVKYPAPILSVALSPDDTHLVTGMANGLLSIRQRQLKAAETPSKKDTDDY---------------LRTGSYRFFIRGQTYTGNSDDFTVESKRKRRLADYDRLLKKFEYGNALDAALRSSHPPVIIVSLLQELIHRDGLSQALSGRDDISLEPIVYFIVKHVDNPKYSNLLIDVTECILELYASVLGQSPLVDDLITRLQTKV 473 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15710.3945.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15710.3945.1 >prot_E-fasciculatus_F_contig15710.3945.1 ID=prot_E-fasciculatus_F_contig15710.3945.1|Name=mRNA_E-fasciculatus_F_contig15710.3945.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=205bp MLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSback to top mRNA from alignment at E-fasciculatus_F_contig15710:34..1870+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15710.3945.1 ID=mRNA_E-fasciculatus_F_contig15710.3945.1|Name=mRNA_E-fasciculatus_F_contig15710.3945.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1837bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15710:34..1870+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15710:34..1870+ >mRNA_E-fasciculatus_F_contig15710.3945.1 ID=mRNA_E-fasciculatus_F_contig15710.3945.1|Name=mRNA_E-fasciculatus_F_contig15710.3945.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1230bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15710:34..1870+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |