mRNA_E-fasciculatus_F_contig15709.3942.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15709.3942.1 vs. uniprot
Match: D7G5D6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D6_ECTSI) HSP 1 Score: 184 bits (467), Expect = 1.490e-54 Identity = 90/103 (87.38%), Postives = 96/103 (93.20%), Query Frame = 1
Query: 1 DTAFALDVSNSACVPSLTITLEWTGESSDVDLYVVEPGGVLVWYSDKIGDVGVLDNDDTDGFGPENYIIDSGLDPAASQVLGEYETYVRLYRGDAATETWRLT 309
DTAFALDVSNSACVPSLTITLEWTGE SDVDLYVVEPGG +V++S++ GDVG LDNDDT GFGPENYIIDS LDPAASQVLGEYETYV+LY GDAATETWRLT
Sbjct: 299 DTAFALDVSNSACVPSLTITLEWTGEISDVDLYVVEPGGEVVYFSNRGGDVGFLDNDDTYGFGPENYIIDSALDPAASQVLGEYETYVKLYSGDAATETWRLT 401
BLAST of mRNA_E-fasciculatus_F_contig15709.3942.1 vs. uniprot
Match: D7G3X5_ECTSI (VWFD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3X5_ECTSI) HSP 1 Score: 185 bits (470), Expect = 6.140e-54 Identity = 90/103 (87.38%), Postives = 97/103 (94.17%), Query Frame = 1
Query: 1 DTAFALDVSNSACVPSLTITLEWTGESSDVDLYVVEPGGVLVWYSDKIGDVGVLDNDDTDGFGPENYIIDSGLDPAASQVLGEYETYVRLYRGDAATETWRLT 309
DTAFALDVSNSACVPSLTITLEWTGE+SDVDLYVVEPGG +V++S++ GDVG LDNDDT GFGPENYIIDS LDPAASQVLGEYETYV+LY GDAATETWRLT
Sbjct: 425 DTAFALDVSNSACVPSLTITLEWTGETSDVDLYVVEPGGEVVYFSNRGGDVGFLDNDDTYGFGPENYIIDSALDPAASQVLGEYETYVKLYSGDAATETWRLT 527
BLAST of mRNA_E-fasciculatus_F_contig15709.3942.1 vs. uniprot
Match: A1SZC5_PSYIN (DUF2135 domain-containing protein n=1 Tax=Psychromonas ingrahamii (strain 37) TaxID=357804 RepID=A1SZC5_PSYIN) HSP 1 Score: 69.3 bits (168), Expect = 1.320e-11 Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 1
Query: 1 DTAFALDVSNSACVPSLTITLEWTGESSDVDLYVVEPGGVLVWYSDKIGDVGVLDNDDTDGFGPENYIIDSGLDPAASQVLGEYETYVRLYRGDAATETWRLT 309
+T F L ++ + + + +L W G+ DVDL+ EP G V+Y K GD G+LD DDT GFGPENY + S G Y+ V +RG+A TET ++T
Sbjct: 305 NTPFPLQIAGTGAIRA---SLSWGGQP-DVDLHAYEPNGRHVYYRSKTGDDGILDVDDTSGFGPENYTV-----ACESVNAGTYQIGVNYFRGNA-TETAKVT 397
BLAST of mRNA_E-fasciculatus_F_contig15709.3942.1 vs. uniprot
Match: A0A7W2T1G3_9GAMM (DUF2135 domain-containing protein n=1 Tax=Colwellia sp. BRX10-3 TaxID=2759844 RepID=A0A7W2T1G3_9GAMM) HSP 1 Score: 66.6 bits (161), Expect = 1.180e-10 Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = 1
Query: 1 DTAFALDVSNSACVPSLTITLEWTGESSDVDLYVVEPGGVLVWYSDKIGDVGVLDNDDTDGFGPENYIIDSGLDPAASQVLGEYETYVRLYRGDAATETWRLT 309
DT F + ++ + S+ +L W G+ DVDL+ EP G V+YS+K GD G+LD DD +G GPENY + S +G Y+ V Y G +A ET ++T
Sbjct: 305 DTPFPVQIAGTG---SIRASLSW-GDQPDVDLHAYEPNGEHVYYSNKTGDDGILDVDDVNGEGPENYTVS-----CESVNVGTYKIGVNYYSG-SAPETAKVT 397
BLAST of mRNA_E-fasciculatus_F_contig15709.3942.1 vs. uniprot
Match: UPI001F43C791 (hypothetical protein n=1 Tax=Vibrio sp. SS-MA-C1-2 TaxID=2908646 RepID=UPI001F43C791) HSP 1 Score: 64.3 bits (155), Expect = 2.490e-10 Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = 1
Query: 49 LTITLEWTGESSDVDLYVVEPGGVLVWYSDKIGDVGVLDNDDTDGFGPENYIIDSGLDPAASQVLGEYETYVRLYRGD 282
+T TL W GE DVDL+V+EP G +V+Y +++GDVG LD DDT +GPE+Y S + G+Y V ++G+
Sbjct: 123 ITATLTW-GEEPDVDLHVIEPMGNMVFYGNRVGDVGELDVDDTSSYGPEHYYA-----RCDSLLPGKYVFGVNYFKGN 194
BLAST of mRNA_E-fasciculatus_F_contig15709.3942.1 vs. uniprot
Match: A0A6N6Z8I4_9BACT (Uncharacterized protein n=1 Tax=Puniceicoccaceae bacterium 5H TaxID=2508868 RepID=A0A6N6Z8I4_9BACT) HSP 1 Score: 63.2 bits (152), Expect = 2.060e-9 Identity = 29/54 (53.70%), Postives = 38/54 (70.37%), Query Frame = 1
Query: 49 LTITLEWTGESSDVDLYVVEPGGVLVWYSDKI-GDVGVLDNDDTDGFGPENYII 207
+ +TL WT + +DVDLYV +P G WYSDK D G LD DDTDG+GPE++ +
Sbjct: 580 ILVTLTWTTDQTDVDLYVTDPTGDTSWYSDKTTADGGELDFDDTDGYGPEHWTL 633
BLAST of mRNA_E-fasciculatus_F_contig15709.3942.1 vs. uniprot
Match: A0A6H5JLL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL4_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 2.530e-8 Identity = 46/109 (42.20%), Postives = 59/109 (54.13%), Query Frame = 1
Query: 10 FALDVSNSACVPSLTITLEWTG------ESSDVDLYVVEPGGVLVWYSDKIGDVGVLDNDDTDGFGP--ENYIIDSGLDPAASQVLGEYETYVRLYRGDAATE-TWRLT 309
F+L +SN ACVPSLTIT EW G E ++ DL + G + + G VGV D+ G P + YI+ SGLD SQVLGEY+ L + T TWR+T
Sbjct: 943 FSLQISNMACVPSLTITHEWIGGNFAPYEITEPDLTTIHSG-----HGNYSGGVGVF-QDNWAGSSPAAKRYILYSGLDVDTSQVLGEYKGRKFLPILPSETPPTWRIT 1045
BLAST of mRNA_E-fasciculatus_F_contig15709.3942.1 vs. uniprot
Match: A0A2N2YQV1_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium HGW-Bacteroidetes-16 TaxID=2013684 RepID=A0A2N2YQV1_9BACT) HSP 1 Score: 59.7 bits (143), Expect = 3.260e-8 Identity = 36/83 (43.37%), Postives = 46/83 (55.42%), Query Frame = 1
Query: 49 LTITLEWTGESSDVDLYVVEPGGVLVWYSDKIG-DVGVLDNDDTDGFGPEN-YIIDSGLDPAASQVLGEYETYVRLYRGDAAT 291
L I L W + +DVDL+V +P G ++YS+ G LD DDT+GFGPEN Y +D+ D G Y V Y GD AT
Sbjct: 366 LQIGLSWNTDDTDVDLWVTDPSGEKIYYSNTTSASGGYLDRDDTNGFGPENIYWVDNIPD-------GNYLIQVHYYSGDPAT 441
BLAST of mRNA_E-fasciculatus_F_contig15709.3942.1 vs. uniprot
Match: A0A1Z5K6X0_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K6X0_FISSO) HSP 1 Score: 58.9 bits (141), Expect = 6.210e-8 Identity = 29/57 (50.88%), Postives = 38/57 (66.67%), Query Frame = 1
Query: 37 CVPSLTITLEWTGESSDVDLYVVE--PGGVLVWYSDKIGDVGVLDNDDTDGFGPENY 201
C L+ TL W +SD+DL+V E P G V+Y + G+ GVLD DDT+G+GPENY
Sbjct: 236 CPADLSFTLTWNTPTSDLDLHVFEGEPSGDHVYYVQQSGEYGVLDWDDTEGYGPENY 292
BLAST of mRNA_E-fasciculatus_F_contig15709.3942.1 vs. uniprot
Match: A0A0H2SDY4_9BACT (Uncharacterized protein n=1 Tax=Marinitoga sp. 1197 TaxID=1428449 RepID=A0A0H2SDY4_9BACT) HSP 1 Score: 57.8 bits (138), Expect = 1.480e-7 Identity = 29/80 (36.25%), Postives = 47/80 (58.75%), Query Frame = 1
Query: 55 ITLEWTGESSDVDLYVVEPGGVLVWYSDKIGDVGVLDNDDTDGFGPENYIIDSGLDPAASQVLGEYETYVRLYRGDAATE 294
I L W +D+DL+V+EP ++Y++K G +G+LD DDTDG+GPE+Y + + + G Y+ +V Y + E
Sbjct: 263 IELTWDKSKADIDLHVIEPDNNEIYYNNKQG-IGILDRDDTDGYGPEHYTLLTN-----KKKKGIYKPFVVYYNDNGQRE 336 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15709.3942.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15709.3942.1 >prot_E-fasciculatus_F_contig15709.3942.1 ID=prot_E-fasciculatus_F_contig15709.3942.1|Name=mRNA_E-fasciculatus_F_contig15709.3942.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=103bp DTAFALDVSNSACVPSLTITLEWTGESSDVDLYVVEPGGVLVWYSDKIGDback to top mRNA from alignment at E-fasciculatus_F_contig15709:2010..2565- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15709.3942.1 ID=mRNA_E-fasciculatus_F_contig15709.3942.1|Name=mRNA_E-fasciculatus_F_contig15709.3942.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=556bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15709:2010..2565- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15709:2010..2565- >mRNA_E-fasciculatus_F_contig15709.3942.1 ID=mRNA_E-fasciculatus_F_contig15709.3942.1|Name=mRNA_E-fasciculatus_F_contig15709.3942.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=618bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15709:2010..2565- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |