prot_E-fasciculatus_F_contig15675.3930.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15675.3930.1
Unique Nameprot_E-fasciculatus_F_contig15675.3930.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length249
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15675.3930.1 vs. uniprot
Match: A0A836CLP6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLP6_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 7.570e-8
Identity = 85/278 (30.58%), Postives = 117/278 (42.09%), Query Frame = 0 
Query:    7 SSVTCKGL-GIEAKANNRVDERVVSALDSSRFVAEMDKGNGFTFEIW----ATFQDFSECPMCLSRHVASIGSRNEELVGEP------CSTTSNV-LFLQTNQSVAMKQRTSL-PDLTCS-TLESWPPV--VEWGFPVHAVFTTATTSLGVATSNTPERDFRTACWYLNG-----MLAGCDV-ELEQA------SLWHNEFYLQVLNDAVAVRSMDTTYAAP--------AGIVFLLAMYNRVLNDSEIVNNYDAGLENSPPVAEDIVVTINEDGEIG 248
            S++ C    GI A   NR   R+ S  DS+ F+  M    GFT E+W    A+F D    P      + SIG+  +   G        C   SN+ L    N   A+  R  L P + C+ T  S  P      G P H V T   + L   T +          +Y NG        G    EL  A      S W   + LQ+ +D     + D  +A P         G ++ +A+Y RVL  +E   NYDA + NSPPVA D+ VT++EDG +G
Sbjct:   62 SNLQCSAANGITAPDVNRDKVRMTSEFDSTAFLNAMTGKAGFTMELWLSHGASFND--NAPF---NTIMSIGTAVDVYQGPTVENNFYCEQNSNLELRYVANDFYAVLLRMELTPTVACTPTTTSSAPTDGAAPGVPQHVVITFDFSRLQPETGSYAVVPVN---YYFNGGDLNAAHGGVTAPELFHARFNGFNSTWVPGYKLQMYSDYRT--AADQMHAGPFSEMFTPWPGTMYSVALYPRVLTAAEAKGNYDAYVPNSPPVAADVNVTVDEDGMVG 329
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15675.3930.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CLP6_9STRA7.570e-830.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15675contigE-fasciculatus_F_contig15675:1250..1996 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15675.3930.1mRNA_E-fasciculatus_F_contig15675.3930.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15675 1250..1996 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15675.3930.1 ID=prot_E-fasciculatus_F_contig15675.3930.1|Name=mRNA_E-fasciculatus_F_contig15675.3930.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=249bp
DLVINTSSVTCKGLGIEAKANNRVDERVVSALDSSRFVAEMDKGNGFTFE
IWATFQDFSECPMCLSRHVASIGSRNEELVGEPCSTTSNVLFLQTNQSVA
MKQRTSLPDLTCSTLESWPPVVEWGFPVHAVFTTATTSLGVATSNTPERD
FRTACWYLNGMLAGCDVELEQASLWHNEFYLQVLNDAVAVRSMDTTYAAP
AGIVFLLAMYNRVLNDSEIVNNYDAGLENSPPVAEDIVVTINEDGEIGD
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