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Homology
BLAST of mRNA_E-fasciculatus_F_contig1565.3915.1 vs. uniprot
Match: A0A6H5KTD8_9PHAE (ULP_PROTEASE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD8_9PHAE) HSP 1 Score: 180 bits (456), Expect = 2.820e-47 Identity = 171/320 (53.44%), Postives = 194/320 (60.62%), Query Frame = 1
Query: 1 GGGGRLTAGHSQVTSVGRYDRDGNQIKRQGGRSARGRGGGGR-FGRQGATMQGKSSGPMSRGNSSVPAEPKTTKSTP-------FFAGP-GPAKKPARAPAGTKNTLHMKVTAGSAAA---KAQQQSRNGGARIVPGGSISKGSGPLANIRAAR-------DKQK-LQRGAGGGGGDRWGMGDEEEKDTFYEASMHPRNRASTQPTKSYGSGSXXXXXXXXXXXSMNGPRGRLGQDHSNRSALTSMSTPLHLAQTPSPVRRRKRPQ--PGGAQTIIPRQMKKPPGSPELVTIDXXXXXXXXXXHELDDGKDVEQVPASDA 894
GG GR AG++Q +G +DR GN +KR GG S RGRG GGR GR + M SSG + R S+ A TTK FFA G AKKPARAPAGTKN L + VT GSAAA +A QQSR+GGA+I P A R D++K LQR AGG DRWG E+EK F E SM +R S QP SYGS SXXXXXXXXXXX Q +SNRS LT MSTP+HL Q SPVRR KR Q P GAQ IP++ +KPPGSPELVTID XXXXXXXXX D K+VE+VPASDA
Sbjct: 10 GGDGRRQAGNNQTRPMGSFDRHGNPLKRDGGIS-RGRGSGGRGSGRLTSIMLPTSSGAVRRDRSTGAATKTTTKPAANPAPKKNFFAPEEGHAKKPARAPAGTKNRLQLAVTPGSAAATVSRASQQSRSGGAKITPXXXXXXXXXXXXXSSAQRAPSAIQLDREKRLQRRAGGVTEDRWGGVGEDEKGVFDEPSMRHYSRRSAQPANSYGS-SXXXXXXXXXXXXXXXXXXXXXQYNSNRSDLTGMSTPVHLKQPSSPVRRTKRLQAKPAGAQKTIPKKPRKPPGSPELVTIDDXXXXXXXXXXXXDGAKEVEEVPASDA 327
BLAST of mRNA_E-fasciculatus_F_contig1565.3915.1 vs. uniprot
Match: D8LDN6_ECTSI (ULP_PROTEASE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDN6_ECTSI) HSP 1 Score: 78.2 bits (191), Expect = 2.440e-12 Identity = 42/61 (68.85%), Postives = 48/61 (78.69%), Query Frame = 1
Query: 637 LGQDHSNRSALTSMSTPLHLAQTPSPVRRRKRPQ--PGGAQTIIPRQMKKPPGSPELVTID 813
+GQDHSNRS LT MSTP+HL Q SPVRR KRPQ P GAQ I ++++KP GSPELVTID
Sbjct: 1 MGQDHSNRSDLTGMSTPVHLKQPFSPVRRTKRPQVKPVGAQKTISKKLRKPTGSPELVTID 61
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 79.0 |
| Seed ortholog evalue | 4.3e-12 |
| Seed eggNOG ortholog | 2880.D8LDN6 |
| KEGG ko | ko:K08596 |
| GOs | GO:0000075,GO:0000278,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006276,GO:0006323,GO:0006464,GO:0006508,GO:0006807,GO:0006996,GO:0007049,GO:0007088,GO:0007093,GO:0007094,GO:0007346,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009987,GO:0010564,GO:0010639,GO:0010948,GO:0010965,GO:0016043,GO:0016787,GO:0016926,GO:0016929,GO:0018193,GO:0018205,GO:0019538,GO:0019783,GO:0022402,GO:0030071,GO:0030261,GO:0031577,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0045786,GO:0045839,GO:0045841,GO:0045930,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051276,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0065007,GO:0070011,GO:0070122,GO:0070138,GO:0070140,GO:0070646,GO:0070647,GO:0071103,GO:0071173,GO:0071174,GO:0071704,GO:0071840,GO:0140096,GO:1901564,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1903047,GO:1905818,GO:1905819,GO:2000816,GO:2001251 |
| EggNOG free text desc. | protein modification by small protein removal |
| EggNOG OGs | COG5160@1,KOG0779@2759 |
| EC | 3.4.22.68 |
| COG Functional cat. | O |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko01002,ko04121 |
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| Model size | 906 |
| Cds size | 903 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1565.3915.1 >prot_E-fasciculatus_F_contig1565.3915.1 ID=prot_E-fasciculatus_F_contig1565.3915.1|Name=mRNA_E-fasciculatus_F_contig1565.3915.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=301bp
GGGGRLTAGHSQVTSVGRYDRDGNQIKRQGGRSARGRGGGGRFGRQGATM
QGKSSGPMSRGNSSVPAEPKTTKSTPFFAGPGPAKKPARAPAGTKNTLHM
KVTAGSAAAKAQQQSRNGGARIVPGGSISKGSGPLANIRAARDKQKLQRG
AGGGGGDRWGMGDEEEKDTFYEASMHPRNRASTQPTKSYGSGSSSSSSTR
STFSSMNGPRGRLGQDHSNRSALTSMSTPLHLAQTPSPVRRRKRPQPGGA
QTIIPRQMKKPPGSPELVTIDDSSSGEEEEEHELDDGKDVEQVPASDASC
I back to topmRNA from alignment at E-fasciculatus_F_contig1565:81..4915- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig1565.3915.1 ID=mRNA_E-fasciculatus_F_contig1565.3915.1|Name=mRNA_E-fasciculatus_F_contig1565.3915.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4835bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1565:81..4915- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGTGGTGGTGGTCGGCTGACAGCCGGGCACAGTCAAGTTACATCCGTGGG
ACGCTACGACCGCGACGGGAATCAGATCAAGGTGCGTGCATGAACCCCCC
GTTCCACCGAAAACCCACGCTCTTTGGCTCTCTCCGTGGAGACCTCGGCG
TGGGGGAATGCTTTTGACAAATGGCGGTCGGTCGTGGTCAGTAGCCCTCG
CAGGGCTTCTCGATTGCGTACAATACGTCGGATATAGGATGCAATTGGGG
AAGTTGGTGGTGTACGAGGGCAGGGTTTGTCCGAGGAGCCGGGGGGGGGG
GAGGCGTGGAAGGAGGCCCAACAACGTTATTGTTTTTTGTGATTCTCTCG
ACCGGAGATTCGGCCGAGCTTCCCGCAGCCGCCGCCGCCGCCGCGGCGTC
GCAACGACAGGTTGTGCGGTCACGGTGTGCACGCCCGCTAGCTTGCTAGA
TTGCTATTTTGAAAGTAGATTGCTTGAGATTGCTTGCCTGCCTGCGTGCT
TGCTTGCTTGCTTGCTTGCTTGCTTGCTTGCATGGACGAAAGCCGTGTGT
CGCAGCCGGCCTTGGTGACCCCGAGGTACCGACTATTATCCTTCGAGGAC
ACATATATCCTCTAGTTTCTCCGCTGGCGGTGTGTTGTTCGGGGCGAGCG
AAGATCTCAGAGACCTCGATGGGGTTTATGGGCCCTGCGTGGGCGTTGTC
TATGCATCGCATTTCCGCTGTCTGCAAGTATGCAGCACATTTCTGTTGTC
TATGCAGCGCATTTCCTTTGGGGAGGGAATTAACGTGTAGGCATGGATTG
TTTTTCACGTGAGGAGGTGCAAGGTAGAAAGTACTCGTTTTTTGCTGTCT
GTGCAAGATGCCGCGACGATAGGCGCCTCCACCACCCGGGAAGTGCTGCA
GGGACTCCGCGTTCTCCTCGCTTTCGCTTTTGGCTGAGAGCAATTGGCCG
GCCACCGTTCGGGTGGAGGGGTTGCTGGGTGCGGGGAGGGGAGACGCGCG
GGGGCGGTGTACTCATAGCCGCGCATGTCGTAGTCGTTTTGACCACTGAT
CTCGACGGTACGAAGCACGTCGGGTTCTCACCGGACCAGGGGGGGGGGTT
AACCTAGATCGTACTGGTCCGCACGGTGTTGGCGTTCTACTTTGCTGCCC
GCCCACATGCACCCCGATTCATGCCTGAACACCGCAGCGGCAAGGAGGAC
GCAGCGCCCGGGGGCGAGGGGGCGGAGGGAGGTTCGGCCGGCAAGGAGCT
ACCATGCAGGGGAAAAGCTCAGGACCCATGAGCAGAGGGAACTCTTCTGT
GAGTTTTCGCGTCGTGTGCGCAGCGCGGTGTGCCGCTACTCTTTTGGTGG
CTCTTCCTGGTGTGACTGGTGGTTGGTTTTTATGCGGTTGTTTCCTTCCG
GCTGCCGTGGCCCCCTCATTGCCTCTGTAAAAGTAAGCACCCCCCTTTGC
CCACGGTGGAACCTTGTGGGCACCAGTGTCGGAGTGGCTACCGAAGGGGG
GATAGTTTCTCCGCCAGTGTGCGGATGACTTCATGATCGCGCCGGGGGTT
GCTCAAGAATTCCTCACTCAAAGGGTCAAAACTAAAATACGTTCCTCAAG
GGAGAAAACAGAATTGGCACACACGAGGGAGGTACACATTACACAAGTGG
TGTACTTTCGTTTCGTTTCGTTTCAAGTTGCGTAACCGATTGGTTAGCTC
GTTTGACCAAGATTAGGCCGTAGGCAGGGGACCGTGAGGTGGATGGCGAC
GGCTGCTGTTGATTCCCGAAAAGGCTCCCCCCTCCAGCTACAGAAGTGAC
GGCAGTTGCCTGTTCACCCCTCCAGAAGTAACGGTAGTTAGATAGGTGAC
CTAAGACACAAGATACCGCACCCGCTGGACGGCTTTCCAAAGCCCGAATT
CTCCACGGTAGAAGGAGTGGCGGAGCCGAAAATGGTGGCAACGAATGCGT
CGGAGAGAGAGCTTTCCGAGAACTTTCCGAAACCGTATCGTCCCGAATTC
TCCACGGTAGAAGGAGCGGCGGAGCCGGAAATGGTGGCAATGGATGCGTC
TCGTCGAGAGAGAACTTTCCGAGAACTTTCCGAAACCGTATCGTTTGAAA
ATCCATGGTCATCGTTGTGAAGTATTGGAGCTGTGAAAATCGATCCAGAG
GGTGTGGCATCTTGTCTCATGTCACCTACGGCACCCCACCGGAGGAAGGC
TGCAGTCGGCGAGCATTCCATGTTCCGGACGGGGGGGGCGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGTCGTGTTGAGGGCCGGTTAACGT
TGACCGTAACGGGCGCGCTGATTCTGTACGCTGCTGTGATTCGTTCCCCT
GGCGCAAACACCGCAGGTTCCAGCAGAACCCAAGACCACAAAGAGCACAC
CTTTTTTCGCAGGGCCAGGGCCTGCGAAGAAACCTGCGGTAAGCCTCGCC
TCCAGCGTGATTTTTTTTTTTTGGCCAAAGCTAAGCACAGCAGCGGTGCT
TGCTGCCGCCTCCTGTGGGTGATGAGGCCGCCGCTGCTTGCTGCTGCTGC
TGCTGCCGGCACGGCGGTGCGCCCATGTGTGATTCCACCGTCGCTACCCT
CCTCGCACAACGCTCCATGGGACATGCACAACGGGAGGCCAGAGAGACGG
ACTTGAAAGATGATGATTTGACGCCTCCCCCTCCCCCCCAAGAGTATACA
CCGAGGTCCCTGGCTCTCCCTGCGTGAAAAGCTGTGAAGCGAAGGAATTT
CTGGGAACGGGAAGTTGGCCTCGGTTTTTTGGCTTAAGGGTCCCGCACAG
CAGTCTCTGCCGAGAATCATCGTAGAGGTCGTAGATGGTTCCCCGTGGCG
TTCTGTTGATATTTGTTTGTCTGACATGGATCGGCCTTTGGTTGTCCCCG
CGCCTGCTGTTGCGTGTTTTTTTTTGTGTGAAGCGAGCCCCGGCGGGCAC
TAAGAACACGCTGCATATGAAAGTCACTGCGGGATCAGCGGCGGCCAAAG
CACAGCAGCAGTCACGAAATGGTGAGAACCAAGACCTACACAAAAACAGA
CAGCGACGCTTTCCTAGATTGTCGCGGGAAAAGCCAGACATTGGGAACTT
TGGGCACGCTAGATAGTATAACAGGGTATAAATAGCGAGTGGCGTCGACC
GAGGATTCTGATGAAGGAGACGAAAGTCAGGTGCGGAGATCGGCAGTTGT
ACTCAATGCCGCCGTTGCTTCTTTATTCAACGCGTCCAGCCCCCCGCCTT
TTGTGTAATAGACGACCTGCTGTTCTTGTGTGCCTCGTTGCAGCCGCCCT
TCCTTGTGTATCGTACCCAACCTGTCGCCCTCTTTTGTCTTCATTTTTTT
TTCATGTAAAGTGTACGTGATGCCTTCCTTTGCCACGATTCGTTTTCTTC
CTTGGTGTTTGTGTTGCACCGCATTTTTTTTTTTTTTTCCCGGTAAAACG
TCACGTCGTCCTCCTTTCGTTGCGCTTCGTTTTTTCAGTTGTGACGACCT
CGTCTCCTGGCTGTAGGGACGTTCCTTCTTCGGTCTCTCGGCGCTTCCCG
TTTTTCGGAGGGCGCGGTCCAATCCATGCCGTTTCGCTTTTGCCGCCTGA
ATTCGTTCCGATCCGTTCTGCCCCCATTTTCTTCTCTCCCGCGTCTCTCG
CGCCCCCTCTCTCCCCTGTCGCGGACACTCAGGAGGCGCCAGGATCGTAC
CTGGCGGTTCTATTTCCAAGGGTTCGGGGCCGCTGGCCAACATTCGGGCT
GCCAGGGACAAGCAGAAATTGCAGCGAGGAGCTGGTGGTGGGGGAGGAGA
TAGGTTTGTGGGTGTTCGCGTGTGCCTTTTTTTTTTCTTTTTTCTTGTTT
CTTTTTTTCTTTGGCATTGTATCCCCCATCTTTACACCTCCACTCGGGTC
AAAGGTTGTGCCTGCACGAAGCTTACGCCATGACTTGATTTGCCCGCGGC
GTCCTCTAACGGCTTTGTTGTCGTACCAGGTCAATAGCCTAACGACCACG
GCATGCACGACTATGAGTACCCCCCCCCCCAAACCAGTTGCCGTGTGAAG
ACCCCCCAAGTTCCTCTGATGTTTGTCGCCGACCCCCCTCATGCTTTGGT
GCTTTACCCGCGTAGATGGGGCATGGGTGACGAAGAAGAGAAAGATACAT
TCTATGAGGCTTCCATGCATCCTCGCAATCGGGCCAGCACCCAACCTACC
AAGTCGTACGGCAGCGGCAGTAGCAGCAGCAGCAGCACCAGGAGCACTTT
CAGCAGCATGAACGGCCCACGAGGCAGGTTAGGGCAAGACCACAGCAACA
GGAGCGCCTTGACATCAATGTCAACTCCCCTTCACCTCGCGCAGACACCG
TCCCCAGTCAGAAGAAGAAAGCGACCGCAGGTGAGGTTCTTTATTGGAGA
TCTCTCCGGGTTTTTTTTGTATGTTCTGATTTTTTTTGCTGGCATTCCTC
TTGGTTGAACGAAAAGAATGTTCTTCGGTCACAGCATGTGTGGGCTTTAG
CCGACCCTCTCCAGCATACTGAGTGAGACTGTTCTTACTGGACAGGAGGT
TTTGCCACCGCCGGAGGCCTTTGTTACCGTGTGTTTGACGTTTCGTGCTT
TTTGTGTATGTTTTCGGATACGTGCGCCTAACGCTCGCTCTGGCACTTGT
TGTGCGTGTTGACGACAGCCCGGCGGGGCTCAGACCATCATCCCCCGGCA
AATGAAAAAGCCTCCAGGGTCGCCGGAGCTGGTGACCATCGACGACTCTT
CTAGCGGCGAAGAAGAAGAAGAACACGAGTTGGACGACGGCAAGGACGTG
GAACAGGTGCCGGCGAGCGATGCGAGTTGCATAGA back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig1565:81..4915- >mRNA_E-fasciculatus_F_contig1565.3915.1 ID=mRNA_E-fasciculatus_F_contig1565.3915.1|Name=mRNA_E-fasciculatus_F_contig1565.3915.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1806bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1565:81..4915- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGTGGTGGTGGTCGGCTGACAGCCGGGCACAGTCAAGTTACATCCGTGGG
ACGCTACGACCGCGACGGGAATCAGATCAAGGGTGGTGGTGGTCGGCTGA
CAGCCGGGCACAGTCAAGTTACATCCGTGGGACGCTACGACCGCGACGGG
AATCAGATCAAGCGGCAAGGAGGACGCAGCGCCCGGGGGCGAGGGGGCGG
AGGGAGGTTCGGCCGGCAAGGAGCTACCATGCAGGGGAAAAGCTCAGGAC
CCATGAGCAGAGGGAACTCTTCTCGGCAAGGAGGACGCAGCGCCCGGGGG
CGAGGGGGCGGAGGGAGGTTCGGCCGGCAAGGAGCTACCATGCAGGGGAA
AAGCTCAGGACCCATGAGCAGAGGGAACTCTTCTGTTCCAGCAGAACCCA
AGACCACAAAGAGCACACCTTTTTTCGCAGGGCCAGGGCCTGCGAAGAAA
CCTGCGGTTCCAGCAGAACCCAAGACCACAAAGAGCACACCTTTTTTCGC
AGGGCCAGGGCCTGCGAAGAAACCTGCGCGAGCCCCGGCGGGCACTAAGA
ACACGCTGCATATGAAAGTCACTGCGGGATCAGCGGCGGCCAAAGCACAG
CAGCAGTCACGAAATGCGAGCCCCGGCGGGCACTAAGAACACGCTGCATA
TGAAAGTCACTGCGGGATCAGCGGCGGCCAAAGCACAGCAGCAGTCACGA
AATGGAGGCGCCAGGATCGTACCTGGCGGTTCTATTTCCAAGGGTTCGGG
GCCGCTGGCCAACATTCGGGCTGCCAGGGACAAGCAGAAATTGCAGCGAG
GAGCTGGTGGTGGGGGAGGAGATAGGAGGCGCCAGGATCGTACCTGGCGG
TTCTATTTCCAAGGGTTCGGGGCCGCTGGCCAACATTCGGGCTGCCAGGG
ACAAGCAGAAATTGCAGCGAGGAGCTGGTGGTGGGGGAGGAGATAGATGG
GGCATGGGTGACGAAGAAGAGAAAGATACATTCTATGAGGCTTCCATGCA
TCCTCGCAATCGGGCCAGCACCCAACCTACCAAGTCGTACGGCAGCGGCA
GTAGCAGCAGCAGCAGCACCAGGAGCACTTTCAGCAGCATGAACGGCCCA
CGAGGCAGGTTAGGGCAAGACCACAGCAACAGGAGCGCCTTGACATCAAT
GTCAACTCCCCTTCACCTCGCGCAGACACCGTCCCCAGTCAGAAGAAGAA
AGCGACCGCAGATGGGGCATGGGTGACGAAGAAGAGAAAGATACATTCTA
TGAGGCTTCCATGCATCCTCGCAATCGGGCCAGCACCCAACCTACCAAGT
CGTACGGCAGCGGCAGTAGCAGCAGCAGCAGCACCAGGAGCACTTTCAGC
AGCATGAACGGCCCACGAGGCAGGTTAGGGCAAGACCACAGCAACAGGAG
CGCCTTGACATCAATGTCAACTCCCCTTCACCTCGCGCAGACACCGTCCC
CAGTCAGAAGAAGAAAGCGACCGCAGCCCGGCGGGGCTCAGACCATCATC
CCCCGGCAAATGAAAAAGCCTCCAGGGTCGCCGGAGCTGGTGACCATCGA
CGACTCTTCTAGCGGCGAAGAAGAAGAAGAACACGAGTTGGACGACGGCA
AGGACGTGGAACAGGTGCCGGCGAGCGATGCGAGTTGCATACCCGGCGGG
GCTCAGACCATCATCCCCCGGCAAATGAAAAAGCCTCCAGGGTCGCCGGA
GCTGGTGACCATCGACGACTCTTCTAGCGGCGAAGAAGAAGAAGAACACG
AGTTGGACGACGGCAAGGACGTGGAACAGGTGCCGGCGAGCGATGCGAGT
TGCATA back to top
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