mRNA_E-fasciculatus_F_contig15649.3914.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig15649.3914.1
Unique NamemRNA_E-fasciculatus_F_contig15649.3914.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig15649.3914.1 vs. uniprot
Match: A0A6H5J668_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J668_9PHAE)

HSP 1 Score: 504 bits (1297), Expect = 1.510e-175
Identity = 289/309 (93.53%), Postives = 293/309 (94.82%), Query Frame = 1
Query:   22 MMLSVLEHLAAAEGDLPLESRTHVASAISSLSSAFGLSLEDPKQVRELSLKPHTLESVFRAGCTALGAKSAGQQLAELQSSEAFGQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSS---RSAXXXXXXXXXXAXRXXXXXPATGAKAVDEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGAGGDADEIATRGGAG 939
            MMLSVLEHLA+AEGDLP ESRTHVASAISSLSSAFGLSLEDPKQVRELSLKPHTLES+FRAGC ALGAKSAGQQLAELQSSEAF QFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAG +S      XXXXXXXXXX X XXXXXPATGAKA DEKKAEEVKGEGNKLLLAKDYEGAEA+YTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGA GDADEIATRG  G
Sbjct:    1 MMLSVLEHLASAEGDLPSESRTHVASAISSLSSAFGLSLEDPKQVRELSLKPHTLESIFRAGCAALGAKSAGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGGASFRXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGARGDADEIATRGAGG 309          
BLAST of mRNA_E-fasciculatus_F_contig15649.3914.1 vs. uniprot
Match: I2CPK1_NANGC (Conserved tpr domain protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPK1_NANGC)

HSP 1 Score: 184 bits (466), Expect = 1.160e-52
Identity = 111/290 (38.28%), Postives = 162/290 (55.86%), Query Frame = 1
Query:   22 MMLSVLEHLAAAEGDLPLESRTHVASAISSLSSAFGLSLEDPKQVRELSLKPHTLESVFRAGCTALGAKSAGQQLAELQSSEAFGQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSSRSAXXXXXXXXXXAXRXXXXXPATGAKAVDEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKL 891
            + L++LE L  +     +ES      A+++L S  G+       +   S KP TL  +F AG  AL  ++ G ++A L++   F Q++  ++ KG+FK VEEGS+ Y +R  K  AKFK + E  S   P                             PA      D+ +A+ +KGEGN  + AKDYE A+  YT+A+ L P+G +SH+Y  NRAAA  +LG +  AV D Q+AI+LNPSY+KAY+RLGYA+F L+ Y  A  AY K+L+++P NAAN + L +A AK+
Sbjct:   13 LSLAILEDLQGSAQTPEMES------ALATLRSTLGVDPAQGSDIAAYSYKPATLSQIFTAGVQALKLQTVGVEMAALKADPLFQQYLGKITEKGFFKDVEEGSKAYIDRFMKAAAKFKEKQEQVSSATP----------------------------SPA------DQARADALKGEGNAAISAKDYEKADICYTKAITLVPAGASSHLYYSNRAAARSHLGNHSGAVEDAQKAIELNPSYSKAYSRLGYAHFYLQQYSKAKDAYTKALDLDPANAANKEYLAKAEAKI 262          
BLAST of mRNA_E-fasciculatus_F_contig15649.3914.1 vs. uniprot
Match: A0A835ZH25_9STRA (SGTA_dimer domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH25_9STRA)

HSP 1 Score: 176 bits (445), Expect = 5.600e-48
Identity = 130/312 (41.67%), Postives = 180/312 (57.69%), Query Frame = 1
Query:    1 MSVDTPTMMLSVLEHLAAAEG--DLPLESRTHVASAISSLSSAFGLSLEDPKQVRELSLKPHTLESVFRAGCTALGAKSAGQQLAELQSSEAFGQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSSRSAXXXXXXXXXXAXRXXXXXPATGAKAVDEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGAGGDADEIATRG 930
            M+ D   +  +V+++L    G  D  ++  + + +A ++L +AFG+   D  Q +ELS +P TL+S+F AG  A GA +A Q+   +  +  F +FV V+SAK       EG+  YD +M K++A FK +      G   E         XXXXXXXXXX X XXXXX A              K EGN+ +  + +  AEA Y+ AL+LSP+GPNSH+Y CNRAAA C+L   D AV DC  +IDL+P+Y KAY RLGYAY+ +ED      AY K++E+EP N AN +SL++A AKL A   A     RG
Sbjct:    1 MAADPKAIAFAVVQYLEGLAGSSDGAVDDVSQLTAAATALKAAFGVDTADAAQAKELSYEPATLDSIFAAGVKATGAVTALQEREAMMQNPLFKKFVGVISAKAPLAA--EGTPEYDVQMNKIIATFKTKF-----GNKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA-------------KAEGNEYIKTQAFRKAEAAYSRALDLSPTGPNSHIYHCNRAAARCFLNDWDAAVEDCLASIDLSPAYIKAYARLGYAYYNMEDXXXXXXAYTKAIELEPNNTANKESLKKAEAKLKAVRSASSSVARG 292          
BLAST of mRNA_E-fasciculatus_F_contig15649.3914.1 vs. uniprot
Match: A0A7S2FWT3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FWT3_9STRA)

HSP 1 Score: 161 bits (407), Expect = 2.570e-43
Identity = 103/282 (36.52%), Postives = 156/282 (55.32%), Query Frame = 1
Query:   64 DLPLE----SRTHVASAISSLSSAFGLSLEDPKQVRELSLKPHTLESVFRAGCTALGAKSAGQQLAELQSSEAFGQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSSRSAXXXXXXXXXXAXRXXXXXPATGAKAVDEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGA 897
            DL LE    S  ++ +A   L+  F ++ +D  Q  E +L+  TL  +  AG T LGAKS  ++L ELQ ++ F QF+  V +KG+F   + G   Y  R  ++V KFK R         + ++  +S++A                      A   +E+KAE+ K EGN+ L AK+Y+ A   Y++A+++ P GP SH+Y  NRA A  YL ++  AV DC  AI+ NP+YAKAYTRLG A   L D+ +AV+ +KK++E+EP N ++ + L+ A  K  A
Sbjct:   21 DLKLEPEVGSVDNLEAATQCLAENFSINTDDINQKEEYALESQTLLELLAAGKTQLGAKSYNEELEELQENKMFQQFLGSVKSKGFFNDTKPGEPEYKARYRRMVTKFKQR---------MNDSKANSKAA--------------------VAAGPTNEEKAEKFKVEGNETLKAKNYDAAVELYSKAIDVCPDGPKSHIYFANRAMARHYLKQHLGAVDDCNAAIERNPAYAKAYTRLGLAQQALNDWSSAVENHKKAVELEPSNKSSAQYLKTAQQKYAA 273          
BLAST of mRNA_E-fasciculatus_F_contig15649.3914.1 vs. uniprot
Match: A0A662X6P5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X6P5_9STRA)

HSP 1 Score: 145 bits (366), Expect = 9.540e-37
Identity = 93/246 (37.80%), Postives = 128/246 (52.03%), Query Frame = 1
Query:  181 TLESVFRAGCTALGAKSAGQQLAE---------LQSSEAFGQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSSRSAXXXXXXXXXXAXRXXXXXPATGAKAVDEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKL 891
            + E VF AG  ALG ++    +AE         L+  E + ++V  + +KG+FKG   GS  +  R  K +AKFK +        PV                                +KA  E KAEEVK  GN  L ++DY GA A Y EAL+LSP GP+SH+Y  N AAAL YLG+  D +  C+++I L PSY KAY+R+G A  QL+DY+ AV ++++ LE++  NAA    L  A  KL
Sbjct:   43 SFEEVFAAGLQALGLETGTAAVAEASVDEDPVVLKHPELWKKWVAKLESKGFFKGAAPGSSEHAARTTKALAKFKEKFGDVKPTAPVL-------------------------------SKAEKEAKAEEVKARGNAALTSRDYAGAAALYREALQLSPDGPSSHIYHSNLAAALMYLGKYTDVIDHCEQSIALQPSYVKAYSRMGGAQVQLKDYDGAVDSFRRGLEVDSANAACRDGLADAERKL 257          
BLAST of mRNA_E-fasciculatus_F_contig15649.3914.1 vs. uniprot
Match: K3WAR9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAR9_GLOUD)

HSP 1 Score: 143 bits (361), Expect = 7.190e-36
Identity = 95/270 (35.19%), Postives = 144/270 (53.33%), Query Frame = 1
Query:  112 LSSAFGLSLEDPKQVRELSLKPH-TLESVFRAGCTALGAK--------SAGQQLAELQSSEAFGQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSSRSAXXXXXXXXXXAXRXXXXXPATGAKAVDEK--KAEEVKGEGNKLLLAKDYEGAEARYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAK 888
            LS AF L++ D +Q R  +L    T E +F AG  AL  +        S  Q    L++ + + +++  +  K +F G+  GS+ +  R+ K +AKFK            E+ G   + A                  P   + + +EK  KAEE KG+GN  L A DY+ A   Y EAL+LSP+GPNSH+Y  N AAAL YLG+ D+ +   +++I L P+Y KAY+R+G+AY QL+D++ A+ A+++ LE++  NAA    L  A  K
Sbjct:   40 LSEAFKLNVHDEQQKRTYALSGSATFEDIFAAGLKALNIEIGAASPLDSVDQDPVVLKNPDLWKKWIAKLEEKNFFNGLPAGSDEHTARLKKALAKFK------------EKFGDVKKPA------------------PTAPSMSKEEKEAKAEEAKGKGNLALSAGDYKQAAVHYEEALKLSPAGPNSHIYHSNLAAALTYLGKYDEVIDHSEKSIALKPAYVKAYSRMGHAYVQLKDFDGAIDAFRRGLEVDSTNAACKDGLAEAERK 279          
BLAST of mRNA_E-fasciculatus_F_contig15649.3914.1 vs. uniprot
Match: H3GML2_PHYRM (STI1 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GML2_PHYRM)

HSP 1 Score: 140 bits (354), Expect = 5.860e-35
Identity = 91/269 (33.83%), Postives = 139/269 (51.67%), Query Frame = 1
Query:  100 AISSLSSAFGLSLEDPKQVRELSLKPH-TLESVFRAGCTALGAKSAGQQLAE-----LQSSEAFGQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSSRSAXXXXXXXXXXAXRXXXXXPATGAKAVDEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAK 888
            A+S L+ AFG+ + D +Q R+L++    +   +F AG  AL  ++  ++  +      +  E + ++V  + AKG+FK    G+  +  R AK + KFK +      G    E     + A                             KAEEVK +GN  L  +DYEGA   Y EAL+LSP GP+SH+Y  N AAAL YLG+  D +  C+++I L P+Y KAY+RLG A  QL+D++ A+ ++++ LE++  NAA    L  A  K
Sbjct:   33 ALSRLTEAFGVDVHDAEQRRQLAVDSDISFNEIFAAGLKALNLETGAKEAVDEDPVVKKHPELWKKWVAKLEAKGFFKDAAPGTSEHATRTAKALGKFKEKF-----GDVKPELSQEEKEA-----------------------------KAEEVKAQGNAALSRQDYEGAAKLYREALQLSPEGPSSHIYHSNLAAALMYLGKYTDVIDHCEQSIVLKPAYVKAYSRLGSAQLQLQDFDGAIDSFRRGLEVDSSNAACRDGLADAERK 267          
BLAST of mRNA_E-fasciculatus_F_contig15649.3914.1 vs. uniprot
Match: D0MS16_PHYIT (Uncharacterized protein n=17 Tax=Phytophthora TaxID=4783 RepID=D0MS16_PHYIT)

HSP 1 Score: 138 bits (348), Expect = 4.470e-34
Identity = 95/276 (34.42%), Postives = 142/276 (51.45%), Query Frame = 1
Query:   91 VASAISSLSSAFGLSLEDPKQVRELSLKPHT-LESVFRAGCTAL----GAKSAGQQLAE-----LQSSEAFGQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSSRSAXXXXXXXXXXAXRXXXXXPATGAKAVDEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAK 888
            V +A++SL+ AFG+++ D +Q R+L++   T  + +F AG  AL    GA    + +A+      +  E + +++  + +KG+FK    GS  Y  R  K +AKFK +          EE                                   E KAEEVK +GN  L  +DYEGA   Y EAL+LS  GP+SH+Y  N AAAL YLG++ + +  C+ +I L PSY KAY+R+G A  QL+D++ A+  Y++ LE++  NAA    L  A  K
Sbjct:   30 VDAALTSLTEAFGMNVHDAEQKRQLAVNGDTSFDEIFAAGLKALNLETGAPGETKSMADEDPVVKKHPELWKKWLAKLESKGFFKDAAPGSGEYATRTNKALAKFKEKFGDVKPDLYKEE----------------------------------KEAKAEEVKAQGNAALSRQDYEGAAKLYREALQLSSDGPSSHIYHSNLAAALMYLGKHTEVIDHCEHSIALQPSYVKAYSRMGSAQVQLQDFDGAIDTYRRGLEVDSTNAACRDGLADAERK 271          
BLAST of mRNA_E-fasciculatus_F_contig15649.3914.1 vs. uniprot
Match: A0A421GVH7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GVH7_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.060e-33
Identity = 101/298 (33.89%), Postives = 153/298 (51.34%), Query Frame = 1
Query:   28 LSVLEHLAAAEGDLPLESRTHVASAISSLSSAFGLSLEDPKQVRELSLKPH-TLESVFRAGCTALGAK----------SAGQQLAELQSSEAFGQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSSRSAXXXXXXXXXXAXRXXXXXPATGAKAVDEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAK 888
            LS +  L  +EG   ++S + V  A+  LS AFG+S+ED +Q ++L++    + + +F AG   L  +          S  +     +  E + ++V  + +KG+F G E GS  Y +R AK +AKFK            E+ G     A                    T +K   E KAEEVK EGN  L  +DYEGA   Y EAL+LS  GP+SH+Y  N AAAL YLG+  + +   +++I L P+Y KAY+R+G A  QL D++ A+ ++++ LE++  +AA    L  A  K
Sbjct:   13 LSWINELKTSEG---VDSES-VDVAVQCLSKAFGVSVEDAEQAQQLAVNGSASFDEIFAAGLKVLKLEIGTDAEAKEASVDEDPVAQKHPELWKKWVAKLESKGFFAGAEVGSSEYTKRTAKALAKFK------------EKFGDVKPVAP-------------------TMSKEEKEAKAEEVKAEGNAALSRRDYEGAATLYREALQLSADGPSSHIYHSNLAAALMYLGQYTEVIDHSEQSIALKPAYVKAYSRMGNAQVQLNDFDGAIDSFRRGLEVDSTSAACRDGLADAERK 275          
BLAST of mRNA_E-fasciculatus_F_contig15649.3914.1 vs. uniprot
Match: A0A484E3R1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3R1_BRELC)

HSP 1 Score: 135 bits (340), Expect = 1.110e-33
Identity = 93/273 (34.07%), Postives = 136/273 (49.82%), Query Frame = 1
Query:  100 AISSLSSAFGLSLEDPKQVRELSLKPHT-LESVFRAGCTALGAKS---------AGQQLAELQSSEAFGQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSSRSAXXXXXXXXXXAXRXXXXXPATGAKAVDEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAK 888
            A+  L+ AFGLS+ DP+  R+L++   T  + +  AG  AL   +         A +     +  E + ++V  + +KG+FK    GS  Y  R  K ++KFK +      G    E                              +K   E KAEEVK +GN  L ++DY+GA   Y EAL+LSP+GP SH+Y  N AAA  Y+G+  + +  C+++I L PSY KAYTRLG A  QL+D++ A+  Y++ LEI+  N A    L  A  K
Sbjct:   34 ALPRLAEAFGLSMHDPELKRQLAINSDTSFDDIVAAGLKALNLDTGTPSEVPSIAAEDPVVKKHPELWQKWVAKLESKGFFKDALPGSSEYTTRTNKALSKFKEKF-----GDVTPEL-----------------------------SKEEKEVKAEEVKAQGNAALSSQDYDGAATLYREALQLSPNGPFSHIYHSNLAAAHMYMGKYTEVIDHCEQSIALKPSYMKAYTRLGSAQLQLQDFDGAIDTYRRGLEIDSTNDACRSGLAEAENK 272          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15649.3914.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J668_9PHAE1.510e-17593.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
I2CPK1_NANGC1.160e-5238.28Conserved tpr domain protein (Fragment) n=1 Tax=Na... [more]
A0A835ZH25_9STRA5.600e-4841.67SGTA_dimer domain-containing protein n=1 Tax=Tribo... [more]
A0A7S2FWT3_9STRA2.570e-4336.52Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A662X6P5_9STRA9.540e-3737.80Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
K3WAR9_GLOUD7.190e-3635.19Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
H3GML2_PHYRM5.860e-3533.83STI1 domain-containing protein n=1 Tax=Phytophthor... [more]
D0MS16_PHYIT4.470e-3434.42Uncharacterized protein n=17 Tax=Phytophthora TaxI... [more]
A0A421GVH7_9STRA1.060e-3333.89Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A484E3R1_BRELC1.110e-3334.07Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15649contigE-fasciculatus_F_contig15649:375..2966 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score486.5
Seed ortholog evalue9.4e-135
Seed eggNOG ortholog2880.D7FN86
Preferred nameSGTB
KEGG koko:K16365
GOsGO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006457,GO:0006508,GO:0006511,GO:0006605,GO:0006612,GO:0006620,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006996,GO:0007029,GO:0008022,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009987,GO:0010033,GO:0010243,GO:0010256,GO:0010498,GO:0010604,GO:0010605,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0019222,GO:0019538,GO:0019941,GO:0030162,GO:0030163,GO:0030433,GO:0030544,GO:0031072,GO:0031323,GO:0031324,GO:0031325,GO:0031329,GO:0031330,GO:0031331,GO:0031333,GO:0032268,GO:0032269,GO:0032270,GO:0032434,GO:0032435,GO:0032436,GO:0032459,GO:0032460,GO:0032947,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0034613,GO:0034976,GO:0036503,GO:0042176,GO:0042177,GO:0042221,GO:0042802,GO:0042803,GO:0042886,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043621,GO:0043632,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0044877,GO:0045047,GO:0045048,GO:0045184,GO:0045732,GO:0045861,GO:0045862,GO:0046907,GO:0046982,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051087,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051205,GO:0051234,GO:0051246,GO:0051247,GO:0051248,GO:0051603,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0061024,GO:0061136,GO:0065007,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071816,GO:0071840,GO:0072379,GO:0072380,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0080134,GO:0080135,GO:0090150,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901799,GO:1901800,GO:1903050,GO:1903051,GO:1903052,GO:1903069,GO:1903070,GO:1903071,GO:1903332,GO:1903334,GO:1903362,GO:1903363,GO:1903364,GO:1903573,GO:1903644,GO:1903646,GO:1904288,GO:1904292,GO:1904293,GO:1904294,GO:1905897,GO:1905898,GO:2000058,GO:2000059,GO:2000060
EggNOG free text desc.negative regulation of ER-associated ubiquitin-dependent protein catabolic process
EggNOG OGsCOG0457@1,KOG0553@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04147,ko04516
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTetratricopeptide TPR1
Ec32 orthologEc-15_003360.1
Exons3
Model size939
Cds size939
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15649.3914.1prot_E-fasciculatus_F_contig15649.3914.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig15649 375..2966 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928038.2181494-CDS-E-fasciculatus_F_contig15649:374..5271622928038.2181494-CDS-E-fasciculatus_F_contig15649:374..527Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15649 375..527 +
1695995798.7364957-CDS-E-fasciculatus_F_contig15649:374..5271695995798.7364957-CDS-E-fasciculatus_F_contig15649:374..527Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15649 375..527 +
1622928038.229473-CDS-E-fasciculatus_F_contig15649:1258..18911622928038.229473-CDS-E-fasciculatus_F_contig15649:1258..1891Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15649 1259..1891 +
1695995798.747065-CDS-E-fasciculatus_F_contig15649:1258..18911695995798.747065-CDS-E-fasciculatus_F_contig15649:1258..1891Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15649 1259..1891 +
1622928038.241239-CDS-E-fasciculatus_F_contig15649:2813..29661622928038.241239-CDS-E-fasciculatus_F_contig15649:2813..2966Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15649 2814..2966 +
1695995798.7552295-CDS-E-fasciculatus_F_contig15649:2813..29661695995798.7552295-CDS-E-fasciculatus_F_contig15649:2813..2966Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15649 2814..2966 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig15649.3914.1

>prot_E-fasciculatus_F_contig15649.3914.1 ID=prot_E-fasciculatus_F_contig15649.3914.1|Name=mRNA_E-fasciculatus_F_contig15649.3914.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=313bp
MSVDTPTMMLSVLEHLAAAEGDLPLESRTHVASAISSLSSAFGLSLEDPK
QVRELSLKPHTLESVFRAGCTALGAKSAGQQLAELQSSEAFGQFVKVVSA
KGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGVSSRSAAA
PAAAAAAPAARRAAAAPATGAKAVDEKKAEEVKGEGNKLLLAKDYEGAEA
RYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYA
KAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGAG
GDADEIATRGGAG
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mRNA from alignment at E-fasciculatus_F_contig15649:375..2966+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig15649.3914.1 ID=mRNA_E-fasciculatus_F_contig15649.3914.1|Name=mRNA_E-fasciculatus_F_contig15649.3914.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2592bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15649:375..2966+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAGCGTGGACACCCCGACCATGATGTTGTCGGTGCTCGAGCACCTTGC TGCCGCGGAGGGCGACTTGCCGTTGGAGTCGCGAACGCACGTGGCCTCGG CCATCTCCAGCCTCTCTTCCGCGTTCGGCCTGAGCCTGGAGGACCCTAAG CAGGTCAGTAAGCACCCTTCCCTGGCATTCATACGGGTGCCGCAGACCAT GGTCGTGTCTCGATAAGGTGGCTTAAGTAATTATGAGATCAGAGGGTGGT TGCGGGTGATGTGATCGACTTTATCTTATTTACCTACACTACATGATTTT GCAAGCTTCGCGGCTCTCGCCGGTCAGGGGCTTGGGGCATTGGCCGCATG ACCGGGACCTTTGAGGTCAACCCACTGCAAGTGGTGACGTACACTCGTTC TCCTCTGTTTCGACGCACACGCAGCAGTCACGCACCCAAATCGTAGCGAC ATATCGTTGGTGCAACAACAAGGCCGTGGTGCTCCCACTCTTGTCGCCAA CCATCAAGCACGAATGTTGCACAGCTTTTTCACTGCCGAACAACGGCTCC GCCAAACTGTCTCGAAAGCTACACACAAACTGTTGCCGTCGCCGTTGCAA ATGCTCTGAGCTCCTAAGCTTAATGCCACAGAGAGGAAAAACGGACCGCC TTGCGAGAAAGTAAGTAACATGAGGAAATAGAACAGGGAGAGGTTACGCA GACCCTATTCCCCATCAACCCTAGCCCGAACTTCCCCGATTGCATGCTTT GTCCAACATGTTTATTTAATAGAACAAGCCTGCGAAGGCTACTGGACAAA AACGGGTTCTCGTACAAACTCCCTCCACATGGAGAACAAACGGGTTCTCG ATCTCACACCACAAAGCCGTCCGTTCCCTGACAGGTTCGTGAGCTGTCCC TGAAGCCGCACACCCTGGAGTCCGTCTTCCGTGCGGGCTGCACCGCCCTC GGGGCCAAGAGCGCCGGCCAGCAGCTCGCCGAGCTGCAGTCCTCCGAGGC GTTCGGCCAGTTCGTCAAGGTTGTGTCCGCGAAGGGCTACTTCAAGGGGG TCGAGGAGGGCAGCGAGGGCTACGACGAGCGCATGGCGAAGCTCGTGGCC AAGTTCAAGGCGCGCACGGAGGCGGCCAGCGGCGGACCCCCCGTGGAAGA GGCCGGGGTCTCGTCCCGCTCTGCCGCCGCCCCGGCCGCGGCAGCGGCGG CGCCCGCAGCAAGGAGAGCTGCCGCGGCGCCGGCCACCGGGGCCAAGGCG GTGGACGAGAAGAAGGCGGAGGAGGTCAAGGGGGAGGGGAACAAGCTCTT GCTGGCCAAGGACTACGAAGGCGCCGAGGCCAGGTACACCGAGGCGCTCG AGCTGTCCCCCTCGGGGCCCAACAGCCACGTCTACCTCTGCAACCGCGCG GCCGCGCTGTGCTACCTCGGACGCAACGACGACGCCGTCGTCGACTGCCA GGAGGCCATCGACCTCAACCCGTCGTACGCGAAGGCGTACACCAGGCTCG GCTACGCCTACTTCCAGGTGCGGTGCCTCCAAAAGGTGTTGTTATTGTGT AGCGGCTTGAGTTCGTTAGTACGTCTTCTTGGGGAAGAACTTTGGTGTGC TCTTCCCATGGAAGGTTCCGGGTGCGGTGCCTCAAAGGTTGTAGGGTGTG CGGCTGAGTTTGTGGGTGTAATTTCTGGGAAATGTTTTTTCTGTGGTGTT GTTGAGACCCTTGAGGCGCCTTCCAGAACTGTGAGCATTGCAAACCAGTA CTACTGTAGGTCACTTGAGTTAGGTGACTGGGTGTAGTTACCGCTTTGAC GTGTGGTCACTCGGGGCCTGCCACCGCGCAGCTGGCCGCAGATGTCAGTT AATCCGGCACTGAGCCCGTTCACACGGCACTGCTTGGCGTCCTTTGTCTG TACCGACTTCCCCAGCGGGAAGAGCGTCGTGGACGCGTGTCCGTGCAGCA GTGTGGGGTAGGCGGGTGGCCAGGCTGCTGCCCTCATTTTCTTACGGCTA CCCAAGATTGTCTTCGTTTTTGTATGCAAGCCGTTCGGGGAGTGTCGCGA TCAACTCTCACCCTTGGTTCCCTTCCTTCCATTTGTGCTATCCTTTCATT TTTTTGTTGGTTGCATTAGCCCTACTCATGAGGGTTATGACAATTCTTCG CTGTTTGATGTGCCGACGCTGCTGGATTTCTGTTGCTGCTCACCCGTGAA ATCATGTTGGGGTGAAGTGTTCCATCATACACCCCGGAGCTTGGGGTTCG CTTGAACCAATCGACGTTGTCGCAAGCGAGTCGATCTATGAGCCTCAATC AATAGGAAACCCACCCACCCCTCATCTGGTCCTCCATGTCTCTGTTTGGA TGAACTGGGCCTGACACTCACCTCTTCTGTCCTTGTGTCTCTTTGCACCA ACCTTGGCGAACACTCTTTGCGATGATGACCGCAAACAGTTGGAAGACTA CGAGGCGGCCGTCAAGGCCTACAAGAAGAGCCTCGAGATCGAGCCGGGGA ACGCCGCAAACACCAAGAGCCTCAGGAGGGCGACCGCCAAGCTTGGCGCG GGGGGAGACGCGGACGAGATTGCCACAAGGGGGGGGGCGGGC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15649:375..2966+

>mRNA_E-fasciculatus_F_contig15649.3914.1 ID=mRNA_E-fasciculatus_F_contig15649.3914.1|Name=mRNA_E-fasciculatus_F_contig15649.3914.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1878bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15649:375..2966+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAGCGTGGACACCCCGACCATGATGTTGTCGGTGCTCGAGCACCTTGC
TGCCGCGGAGGGCGACTTGCCGTTGGAGTCGCGAACGCACGTGGCCTCGG
CCATCTCCAGCCTCTCTTCCGCGTTCGGCCTGAGCCTGGAGGACCCTAAG
CAGATGAGCGTGGACACCCCGACCATGATGTTGTCGGTGCTCGAGCACCT
TGCTGCCGCGGAGGGCGACTTGCCGTTGGAGTCGCGAACGCACGTGGCCT
CGGCCATCTCCAGCCTCTCTTCCGCGTTCGGCCTGAGCCTGGAGGACCCT
AAGCAGGTTCGTGAGCTGTCCCTGAAGCCGCACACCCTGGAGTCCGTCTT
CCGTGCGGGCTGCACCGCCCTCGGGGCCAAGAGCGCCGGCCAGCAGCTCG
CCGAGCTGCAGTCCTCCGAGGCGTTCGGCCAGTTCGTCAAGGTTGTGTCC
GCGAAGGGCTACTTCAAGGGGGTCGAGGAGGGCAGCGAGGGCTACGACGA
GCGCATGGCGAAGCTCGTGGCCAAGTTCAAGGCGCGCACGGAGGCGGCCA
GCGGCGGACCCCCCGTGGAAGAGGCCGGGGTCTCGTCCCGCTCTGCCGCC
GCCCCGGCCGCGGCAGCGGCGGCGCCCGCAGCAAGGAGAGCTGCCGCGGC
GCCGGCCACCGGGGCCAAGGCGGTGGACGAGAAGAAGGCGGAGGAGGTCA
AGGGGGAGGGGAACAAGCTCTTGCTGGCCAAGGACTACGAAGGCGCCGAG
GCCAGGTACACCGAGGCGCTCGAGCTGTCCCCCTCGGGGCCCAACAGCCA
CGTCTACCTCTGCAACCGCGCGGCCGCGCTGTGCTACCTCGGACGCAACG
ACGACGCCGTCGTCGACTGCCAGGAGGCCATCGACCTCAACCCGTCGTAC
GCGAAGGCGTACACCAGGCTCGGCTACGCCTACTTCCAGGTTCGTGAGCT
GTCCCTGAAGCCGCACACCCTGGAGTCCGTCTTCCGTGCGGGCTGCACCG
CCCTCGGGGCCAAGAGCGCCGGCCAGCAGCTCGCCGAGCTGCAGTCCTCC
GAGGCGTTCGGCCAGTTCGTCAAGGTTGTGTCCGCGAAGGGCTACTTCAA
GGGGGTCGAGGAGGGCAGCGAGGGCTACGACGAGCGCATGGCGAAGCTCG
TGGCCAAGTTCAAGGCGCGCACGGAGGCGGCCAGCGGCGGACCCCCCGTG
GAAGAGGCCGGGGTCTCGTCCCGCTCTGCCGCCGCCCCGGCCGCGGCAGC
GGCGGCGCCCGCAGCAAGGAGAGCTGCCGCGGCGCCGGCCACCGGGGCCA
AGGCGGTGGACGAGAAGAAGGCGGAGGAGGTCAAGGGGGAGGGGAACAAG
CTCTTGCTGGCCAAGGACTACGAAGGCGCCGAGGCCAGGTACACCGAGGC
GCTCGAGCTGTCCCCCTCGGGGCCCAACAGCCACGTCTACCTCTGCAACC
GCGCGGCCGCGCTGTGCTACCTCGGACGCAACGACGACGCCGTCGTCGAC
TGCCAGGAGGCCATCGACCTCAACCCGTCGTACGCGAAGGCGTACACCAG
GCTCGGCTACGCCTACTTCCAGTTGGAAGACTACGAGGCGGCCGTCAAGG
CCTACAAGAAGAGCCTCGAGATCGAGCCGGGGAACGCCGCAAACACCAAG
AGCCTCAGGAGGGCGACCGCCAAGCTTGGCGCGGGGGGAGACGCGGACGA
GATTGCCACAAGGGGGGGGGCGGGCTTGGAAGACTACGAGGCGGCCGTCA
AGGCCTACAAGAAGAGCCTCGAGATCGAGCCGGGGAACGCCGCAAACACC
AAGAGCCTCAGGAGGGCGACCGCCAAGCTTGGCGCGGGGGGAGACGCGGA
CGAGATTGCCACAAGGGGGGGGGCGGGC
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