mRNA_E-fasciculatus_F_contig1564.3910.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1564.3910.1 vs. uniprot
Match: D8LS28_ECTSI (PX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS28_ECTSI) HSP 1 Score: 907 bits (2344), Expect = 3.490e-313 Identity = 569/695 (81.87%), Postives = 585/695 (84.17%), Query Frame = 3
Query: 327 GRKSMNIMKNAVMTGTRRIARHVPMSMPNPKTXXXXXXXXXXVPKFPTKYNPYKRSSNRRSNNDLSEGAGGSMADVFSGGHLGNGSXXXXXXXXXXXXXXXXXXGEMNGLTWQAHDGIGDSGGISSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLSPRRKSYLWKRPTAKPGLDGGGXXXXXXGVQSYASAGALLRPRLDAETVTVASQESG---AAAFLDGRPSASGHADVRAARRPSAAGAMPAD-----AGNGVTAAXXXXXXXXXXEENGGRNGGDLSGRAAQSGDGGGG----VELLAGVKDGGDGHRFRVRAASFLADGREVQAEPAVCPLVYAELFTFASADRPHGVPAPTVAEEACASRGRVDHIATKGRCASKITELTTRSGGHAGEGHAGGNDDVNEEDGGSRLGPPFLVMFNFQIPGDPPLSLVAAWAVHPECLGPDSPESLRRFFGVFYRLVDIPLSSPHPSPGETRAGGGGAADGEGGGAVVASPTARGSLAPSDSHLWETSDSGSDSSGDELEGVGRGSRGGDLANGGGKNKIGNVGTGETPAGTPRNGTVKAAEAAADGVPGQGDQRIKLAVSLLDGPQVVAEALPKSGSSLLGHEASLRYFRGERYLEVDVDLASSSASSRVTSLCREHAKSLSLEVGLILHGESESELPESVLGVLRIDKLDPQDAERHRPLWGS 2375
GRKSM+ MKNAVMTGTRRIARHVPMSMPNPK XXXXX VPKFPTKYNPYKRSS RRSNND SE AGGSMAD+FSG HLGN XXXXXXXXXXXXXXXXXX EM+GLTWQAHDGI DSGG+SSSG XXXXXXXXXXXXXXXXX S LSPRRKSYLWKRPTAK G + XXXXGVQSY SAGA+LRPR DAETVTVA QE+G AAA LDGRPS SGHAD ARR AAG +P D +G AA ENGGRN DLSGRAA+SGD GGG VELLAGVKDGGDGHRFRVR ASFLADGREVQAEPAVCPLVYAELFTFASADRPH VPA TVAEEACAS GRVDHIATKGRCASKITELT RSGGHAGEGHAGGNDDV+EE G SRLGPPFLV+FNFQIPGDPPLSLVAAWAVHPECLGPDSPESLRRFFGVFYRLVDIPLSSP PS GETRAGGGGAADG VASPTA GSL PSDSHLWETSDS DSSGDELEGVG S GG L NGG KNKIGNV TGETPAG R+GTVKAA ADGVPGQGDQ+IKLAVSLLDGPQVVAEALP+SGSSLLGHEASLRYFRGERYLEVDVDLASSSASS+VTSLCREHAKSLSLEVGLILHGE ESELPESVLGVLRIDKLDPQD RHR LWGS
Sbjct: 230 GRKSMHYMKNAVMTGTRRIARHVPMSMPNPKAIQXXXXXPKGVPKFPTKYNPYKRSSTRRSNNDFSEDAGGSMADIFSGAHLGN--XXXXXXXXXXXXXXXXXXXEMDGLTWQAHDGIDDSGGVSSSGGAXXXXXXXXXXXXXXXXXA-------SGLSPRRKSYLWKRPTAKTGGN-----XXXXGVQSYTSAGAILRPRPDAETVTVAPQETGGGGAAALLDGRPSVSGHADGGEARR--AAGTVPGDVPHQESGAADAAAAATVAAVAGGLENGGRNRVDLSGRAARSGDAGGGSGGGVELLAGVKDGGDGHRFRVRGASFLADGREVQAEPAVCPLVYAELFTFASADRPHEVPAATVAEEACASSGRVDHIATKGRCASKITELTARSGGHAGEGHAGGNDDVDEEGGRSRLGPPFLVIFNFQIPGDPPLSLVAAWAVHPECLGPDSPESLRRFFGVFYRLVDIPLSSPRPSSGETRAGGGGAADGXXXXXAVASPTASGSLTPSDSHLWETSDSDRDSSGDELEGVGGRSGGGGLTNGGDKNKIGNVSTGETPAGNQRSGTVKAA---ADGVPGQGDQQIKLAVSLLDGPQVVAEALPESGSSLLGHEASLRYFRGERYLEVDVDLASSSASSQVTSLCREHAKSLSLEVGLILHGELESELPESVLGVLRIDKLDPQDTTRHRLLWGS 905
BLAST of mRNA_E-fasciculatus_F_contig1564.3910.1 vs. uniprot
Match: W7U3Y4_9STRA (PX domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3Y4_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.160e-20 Identity = 108/374 (28.88%), Postives = 154/374 (41.18%), Query Frame = 3
Query: 1218 DGGDGHRFRVRAASFLADGREVQAEPAVCPLVYAELFTFASADRPHGVPAPTVAEEACASRGRVDHIATKGRCASKITELTTRSGGHAGEGHAGGNDDVNEEDGGSRLGPPFLVMFNFQIPGDPPLSLVAAWAVHPECLGPDSPESLRRFFGVFYRLVDIPLSSPHPSPGETRAGGGGAADGEGGGAVVASPTARGSLAPSDSHLWETSDSGSDSSGDELEGVGRGSRGGDLANGGGKNKIGNVGTGETPAGTPRNGTVKAAEAAADGVPGQGDQRIKLAVSLLDGPQVVAEALPKSGSSLLGHEASLRYFRGERYLEVDVDLASSSASSRVTSLCREHAKSLSLEVGLILHGESES-ELPESVLGVLRIDKLD 2336
D G G+ FRVR +L D + A P V LV A +F S + P R DHIA++GR A + E+ D+ DG F + NFQ+PGDPPLS+V +A+ + P F+ +F R VD P+ D+++G G+ RGG A KNK R KL S++DGP ++ A+ ++LG + + RYFRGE Y+EVDVD+ASS+ +S++ SLCR +AK L +E+G++L GE E+ ELPE +LG + I LD
Sbjct: 568 DPGRGNSFRVRGRRYLHDRLKTPAGPPVGELVIAYVFRI-SPENPGQ---------------REDHIASRGRMAEILREMQ----------------DMKGRDGKHT----FFFLLNFQVPGDPPLSMVTVFALPRD----RRPAEDGCFWTLFDRFVDFPM-------------------------------------------------------DDIKGEGKSDRGGRYALSDFKNK-----------------------------------RFKLIPSIVDGPSMIKWAVGNK-PTILGQKLTQRYFRGEDYVEVDVDIASSALASQIVSLCRGYAKYLQVEMGILLQGEDETAELPEKLLGTIGIRNLD 810
BLAST of mRNA_E-fasciculatus_F_contig1564.3910.1 vs. uniprot
Match: D7G1Z5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Z5_ECTSI) HSP 1 Score: 90.1 bits (222), Expect = 1.330e-14 Identity = 47/105 (44.76%), Postives = 72/105 (68.57%), Query Frame = 3
Query: 2037 DQRIKLAVSLLDGPQVVAEALPKSGSSLLGHEASLRYFRGERYLEVDVDLASSSASSRVTSLCREHAKSLSLEVGLILHGESESELPESVLGVLRIDKLDPQDAE 2351
+QR KL S++ GP +V +A+ +LLG + S RYFRG Y+E DVD+ SS + ++ SLCR +AK+L++E+G+ L G + ELPE+V+GV+R+ +D AE
Sbjct: 525 NQRFKLIPSVVSGPFIVRKAVGNK-PALLGRKVSQRYFRGPGYVETDVDVGSSMIAEKIVSLCRGYAKALTVELGICLEGRCDEELPETVMGVIRLVNVDIDMAE 628
BLAST of mRNA_E-fasciculatus_F_contig1564.3910.1 vs. uniprot
Match: A0A7S2CMY1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMY1_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.370e-14 Identity = 45/105 (42.86%), Postives = 73/105 (69.52%), Query Frame = 3
Query: 2037 DQRIKLAVSLLDGPQVVAEALPKSGSSLLGHEASLRYFRGERYLEVDVDLASSSASSRVTSLCREHAKSLSLEVGLILHGESESELPESVLGVLRIDKLDPQDAE 2351
+QR KL ++ +GP +V +A+ +LLG + + RYFRGE Y+E DV + SS+ +++V LCR + K+L++E+G++L G SE+ELPE ++GV R K+D + E
Sbjct: 375 NQRFKLIPAITEGPFLVKQAVGAK-PALLGQKLTQRYFRGEHYVETDVHVGSSAIANQVVGLCRGYCKALTVEIGIVLEGRSEAELPEKLIGVGRFKKIDIEAGE 478
BLAST of mRNA_E-fasciculatus_F_contig1564.3910.1 vs. uniprot
Match: A0A7J9JP51_9ROSI (EDR2_C domain-containing protein n=1 Tax=Gossypium armourianum TaxID=34283 RepID=A0A7J9JP51_9ROSI) HSP 1 Score: 80.9 bits (198), Expect = 3.220e-13 Identity = 36/104 (34.62%), Postives = 69/104 (66.35%), Query Frame = 3
Query: 2037 DQRIKLAVSLLDGPQVVAEALPKSGSSLLGHEASLRYFRGERYLEVDVDLASSSASSRVTSLCREHAKSLSLEVGLILHGESESELPESVLGVLRIDKLDPQDA 2348
+QR+K+ +++GP +V +A+ + L+G + Y+RGE YLE+DVD+ASS+ ++ + L A S+ +++G ++ G++E ELPE ++G +R+ K++ A
Sbjct: 82 NQRLKMVNRIVEGPWIVKKAVGNYAACLIGKALTCNYYRGENYLEIDVDVASSAVANAILHLALGCATSVVIDMGFVVEGQTEDELPEKLIGAVRVSKMEMSSA 185
BLAST of mRNA_E-fasciculatus_F_contig1564.3910.1 vs. uniprot
Match: A0A7J9ENF8_9ROSI (EDR2_C domain-containing protein n=1 Tax=Gossypium trilobum TaxID=34281 RepID=A0A7J9ENF8_9ROSI) HSP 1 Score: 78.2 bits (191), Expect = 2.710e-12 Identity = 35/104 (33.65%), Postives = 68/104 (65.38%), Query Frame = 3
Query: 2037 DQRIKLAVSLLDGPQVVAEALPKSGSSLLGHEASLRYFRGERYLEVDVDLASSSASSRVTSLCREHAKSLSLEVGLILHGESESELPESVLGVLRIDKLDPQDA 2348
+QR+K+ +++GP +V +A+ + L+G + Y RG+ YLE+DVD+ASS+ ++ + L A S+ +++G ++ G++E ELPE ++G +R+ K++ A
Sbjct: 82 NQRLKMVNRIVEGPWIVKKAVGNYAACLIGKALTCNYHRGDNYLEIDVDVASSAVANAILHLALGCATSVVIDMGFVVEGQTEDELPEKLIGAVRVSKMEMSSA 185
BLAST of mRNA_E-fasciculatus_F_contig1564.3910.1 vs. uniprot
Match: A0A7J9C987_GOSGO (EDR2_C domain-containing protein n=18 Tax=Gossypium TaxID=3633 RepID=A0A7J9C987_GOSGO) HSP 1 Score: 79.7 bits (195), Expect = 6.090e-12 Identity = 35/104 (33.65%), Postives = 69/104 (66.35%), Query Frame = 3
Query: 2037 DQRIKLAVSLLDGPQVVAEALPKSGSSLLGHEASLRYFRGERYLEVDVDLASSSASSRVTSLCREHAKSLSLEVGLILHGESESELPESVLGVLRIDKLDPQDA 2348
+QR+K+ +++GP +V +A+ + L+G + Y+RG+ YLE+DVD+ASS+ ++ + L A S+ +++G ++ G++E ELPE ++G +R+ K++ A
Sbjct: 216 NQRLKMVNRIVEGPWIVKKAVGNYAACLIGKALTCNYYRGDNYLEIDVDVASSAVANAILHLALGCATSVVIDMGFVVEGQTEDELPEKLIGAVRVSKMEMSSA 319
BLAST of mRNA_E-fasciculatus_F_contig1564.3910.1 vs. uniprot
Match: D7FIG2_ECTSI (EDR2_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG2_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 7.830e-12 Identity = 84/323 (26.01%), Postives = 140/323 (43.34%), Query Frame = 3
Query: 1404 RVDHIATKGRCASKITELTTRSGGHAGEGHAGGNDDVNEEDGGSRLGPPFLVMFNFQIPGDPPLSLVAAWAVHPECLGPDSPESLRRFFGVFYRLVDIPLSSPHPSPGETRAGGG-GAADGEGGGAVVASPTARGSLAPSDSHLWETSDSGSDSSGDELEGVGRGSRGGDLANGGGKNKIGNVGTGETPAGTPRNGTVKAAEAAADGVPGQGDQRIKLAVSLLDGPQVVAEALPKSGSSLLGHEASLRYFRGERYLEVDVDLASSSASSRVTSLCREHAKSLSLEVGLILHGESESELPESVLGVLRIDKLDPQDAERHRPLW 2369
R+DHIA++G C ++ +T+ DD PFL + N Q+ G PP+S+VA WAV + G + + G + + + + ET G G + GE G A P G ++ +S S +D + + GGD + + T P + T R KL ++ GP +V +A+ S LLG + + RY+RGERY+E D+D SS A++ + CR ++ + +E+G++L S ELPE++LG +R++ +D + L+
Sbjct: 207 RIDHIASRGTCRERVEAMTS-------------GDDA-----------PFLFIMNIQVRGTPPVSMVAYWAVDRD--GLEEAKDAATAAGTLQGVPSDHIDTTEAAVDETDTENGLGQSVGESNGLTGAGPQGEGDVSGRESVFSRIVASYAD--------IPVSTFGGD--------ECAMMDTAPPPPYSDERNT-----------------RFKLIPRVIGGPWMVRKAVG-STPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAQELPEALLGAVRLNGFGVEDPDLQTKLY 469
BLAST of mRNA_E-fasciculatus_F_contig1564.3910.1 vs. uniprot
Match: A0A3S3MNI3_9MAGN (Protein ENHANCED DISEASE RESISTANCE 2-like protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3MNI3_9MAGN) HSP 1 Score: 79.0 bits (193), Expect = 8.400e-12 Identity = 36/105 (34.29%), Postives = 67/105 (63.81%), Query Frame = 3
Query: 2037 DQRIKLAVSLLDGPQVVAEALPKSGSSLLGHEASLRYFRGERYLEVDVDLASSSASSRVTSLCREHAKSLSLEVGLILHGESESELPESVLGVLRIDKLDPQDAE 2351
+ R+KL +++ GP +V A+ + +LG S +YF GE Y+EVDVD+ +S ++ + L + +L++++ ++ G++ESELPE +LG +R +L+P A+
Sbjct: 145 NSRLKLIANIVKGPWIVRTAVGEQAICILGRAVSCKYFIGENYIEVDVDIGASMVANAIVHLAFGYITTLTVDLAFLIEGQTESELPERILGAVRFSELNPASAK 249
BLAST of mRNA_E-fasciculatus_F_contig1564.3910.1 vs. uniprot
Match: UPI001FB06EE4 (protein ENHANCED DISEASE RESISTANCE 2-like n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB06EE4) HSP 1 Score: 78.2 bits (191), Expect = 8.760e-12 Identity = 38/104 (36.54%), Postives = 65/104 (62.50%), Query Frame = 3
Query: 2037 DQRIKLAVSLLDGPQVVAEALPKSGSSLLGHEASLRYFRGERYLEVDVDLASSSASSRVTSLCREHAKSLSLEVGLILHGESESELPESVLGVLRIDKLDPQDA 2348
+QR+KL ++ GP +V A+ + LLG + Y+RGE YLEVDVDL SS+ +S + L + ++ +++G ++ G+ E ELPE +LG +R+ +++ A
Sbjct: 159 NQRLKLVNRIVKGPWIVKTAVGNYAACLLGKALTCNYYRGENYLEVDVDLGSSAIASAILHLALGYVTAVRIDMGFVIEGQCEDELPERLLGAVRVCQMEMSSA 262 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1564.3910.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1564.3910.1 >prot_E-fasciculatus_F_contig1564.3910.1 ID=prot_E-fasciculatus_F_contig1564.3910.1|Name=mRNA_E-fasciculatus_F_contig1564.3910.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=680bp MNIMKNAVMTGTRRIARHVPMSMPNPKTIQRHIPMPKGVPKFPTKYNPYKback to top mRNA from alignment at E-fasciculatus_F_contig1564:181..9446+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1564.3910.1 ID=mRNA_E-fasciculatus_F_contig1564.3910.1|Name=mRNA_E-fasciculatus_F_contig1564.3910.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=9266bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1564:181..9446+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1564:181..9446+ >mRNA_E-fasciculatus_F_contig1564.3910.1 ID=mRNA_E-fasciculatus_F_contig1564.3910.1|Name=mRNA_E-fasciculatus_F_contig1564.3910.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4080bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1564:181..9446+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |