mRNA_E-fasciculatus_F_contig1560.3893.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1560.3893.1 vs. uniprot
Match: D7FVQ4_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ4_ECTSI) HSP 1 Score: 1202 bits (3111), Expect = 0.000e+0 Identity = 711/814 (87.35%), Postives = 733/814 (90.05%), Query Frame = 1
Query: 1213 DDGRALSAESEQMHAKMDFQVDERVREALEEHNTREKTLIQDIDGLRLALRECKQELAKTKKDASAAAAANSTKLAEAIHASKAVEQDIVCRKDLEKEVERLKDELKQADIRLDSLSANLAQKNKLVDKIAELQRTTGEAQEGLRAANDRFNEEVMRMNADVANAEDALEKSSRECRRLEATVDDAIADKEQAQALVEAERTEVKRLSLAAVSTETALTEAKSKVEGLARQLKHVQQRIEASEGLERDLKRLGQEAEEMHQKSHRVLDEKQREMEAYRSRVEEGEALSRKLRGSLAEAEGRALQEKGAAERLMLRVSSLEGQVLEGKAALASTEADRSGILSELTATREAAARVEELKAAITESTSREEALRVEMAAKRNALEAAEASLERERHISSETRTDLVKRAEGAEKRCESLQSSTKEVTQKLRDTEQRFHKELEKSKERESXXXXXXXXXXXXXXXXXXXXXXXXXXFDAKLGDLEKHLSKAEKQLLGSQAECMRIKEAAQREVKEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKTLTDKLSEGRVVEEGIRARCKEVSAREEETRNKLTALQNARIAAEQETATARAEAAGLQNQLHDLRIRFDDESARLRADVEESRTRFTTAASKDEAERRVLEESRQKAEARCAVLQDTTNRLEGDLARLTAQQVAAGSMDPDTPRRGDSQEITGLKFKVVECQGEIQQLSSRVSSLTEEKRELEERQDQEKLRYSQLEAASIESRQGYDCVKEENEGNKRLASAAQEQAQEWKTKFEAERVLRRQLNAKILDMQGSIRVLCRLRPLQEAEV 3654
+D RALSAESEQM AKMDFQVDERVREALEEHNTRE+TLIQDID LRLALRECK ELAKTKK+ASAAAAANSTKLAEA+HASKAVEQDI+CRKDLEKEVERLK +LKQADIRLDSLSA+LAQKNK+VDKIAELQRTTGEAQEGLRAANDRFNEEVMRMNADVANAEDALEKSSRECRRLEA VDDAIADKEQAQALVEAERTEVKRLSLAAVSTETALTEAKSKVEGLARQLK+VQQR+EASEGLERDLKRLGQEAEEMHQKSHRVLDEK+REMEAYRSRVEEGEALSRKLRGSLAEAEGRALQEKGAAERLMLRVSSLEGQVLEGKAALAS EADRS ILSELTATREAAAR EELKAAITESTSREEALRVEMAA RNALEA EASLERERH+SSETRTDLVKRAEGAE RCESLQSSTKEVTQKLRDTEQRFHKELEKSKERE+ FDAKLGDLEKHL+K EKQLLGSQAEC+RIKEAAQREVKEK IKTLTDKLSEGRVVEEGIRARC+EVS REEE RNKLT LQNARIAAEQE A ARAEAAGL+NQLHDLR RFDDESARLR DVE SRTRFT AASKDEAERRVLEESRQ+AEARCAVLQDTTNRLEGDLARLTAQ VAAGSMDPD PR GDSQEITGLKFKVVECQGEIQQLSSRVSSLTEEK ELEERQ+QEKLRYSQLEAASI+SRQGYD VKEENEGNKRLASAAQE+AQEWKTKFEAERVLRR+LNAKILDMQGSIRVLCRLRPLQEAEV
Sbjct: 14 EDRRALSAESEQMRAKMDFQVDERVREALEEHNTREQTLIQDIDALRLALRECKLELAKTKKEASAAAAANSTKLAEAVHASKAVEQDILCRKDLEKEVERLKGDLKQADIRLDSLSADLAQKNKMVDKIAELQRTTGEAQEGLRAANDRFNEEVMRMNADVANAEDALEKSSRECRRLEAAVDDAIADKEQAQALVEAERTEVKRLSLAAVSTETALTEAKSKVEGLARQLKNVQQRVEASEGLERDLKRLGQEAEEMHQKSHRVLDEKKREMEAYRSRVEEGEALSRKLRGSLAEAEGRALQEKGAAERLMLRVSSLEGQVLEGKAALASIEADRSAILSELTATREAAARAEELKAAITESTSREEALRVEMAATRNALEAVEASLERERHVSSETRTDLVKRAEGAETRCESLQSSTKEVTQKLRDTEQRFHKELEKSKERETEMWAQLQQVSSNFAEAANSKKEGETSFDAKLGDLEKHLNKTEKQLLGSQAECVRIKEAAQREVKEKEAELESLRERLSRKKDKFAAQKLSLEQEIKTLTDKLSEGRVVEEGIRARCREVSEREEEARNKLTVLQNARIAAEQEIAAARAEAAGLKNQLHDLRTRFDDESARLREDVEVSRTRFTAAASKDEAERRVLEESRQEAEARCAVLQDTTNRLEGDLARLTAQ-VAAGSMDPDAPRGGDSQEITGLKFKVVECQGEIQQLSSRVSSLTEEKSELEERQEQEKLRYSQLEAASIQSRQGYDRVKEENEGNKRLASAAQEEAQEWKTKFEAERVLRRELNAKILDMQGSIRVLCRLRPLQEAEV 826
BLAST of mRNA_E-fasciculatus_F_contig1560.3893.1 vs. uniprot
Match: A0A6H5KGG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGG1_9PHAE) HSP 1 Score: 874 bits (2258), Expect = 3.590e-304 Identity = 580/697 (83.21%), Postives = 601/697 (86.23%), Query Frame = 1
Query: 1213 DDGRALSAESEQMHAKMDFQVDERVREALEEHNTREKTLIQDIDGLRLALRECKQELAKTKKDASAAAAANSTK----------------------LAEAIHASKAVEQDIVCRKDLEKEVERLKDELKQADIRLDSLSANLAQKNKLVDKIAELQRTTGEAQEGLRAANDRFNEEVMRMNADVANAEDALEKSSRECRRLEATVDDAIADKEQAQALVEAERTEVKRLSLAAVSTETALTEAKSKVEGLARQLKHVQQRIEASEGLERDLKRLGQEAEEMHQKSHRVLDEKQREMEAYRSRVEEGEALSRKLRGSLAEAEGRALQEKGAAERLMLRVSSLEGQVLEGKAALASTEADRSGILSELTATREAAARVEELKAAITESTSREEALRVEMAAKRNALEAAEASLERERHISSETRTDLVKRAEGAEKRCESLQSSTKEVTQKLRDTEQRFHKELEKSKERESXXXXXXXXXXXXXXXXXXXXXXXXXXFDAKLGDLEKHLSKAEKQLLGSQAECMRIKEAAQREVKEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKTLTDKLSEGRVVEEGIRARCKEVSAREEETRNKLTALQNARIAAEQETATARAEAAGLQNQLHDLRIRFDDESARLRADVEESRTRFTTAASKDEAERRVLEESRQKAEARCAVLQDTTNRLEGDLARLTAQ 3237
DD RALSAESEQMHAKMDFQVDERVREALEEHNTRE+ LIQDID LRLALRECKQELAKTKKDASAAA +STK LAEAIHASKAVEQDI+CRKDLEKEVERLK ELKQADIRLDSLS +LAQKNK+VDKIAELQRTTGEAQEGLRAAN+RFNEEVMRMNADVANAE+ALEKSSRECRRLEA VDDAIADKEQAQALVEAERTEVKRLSLAAVSTETALTEA SKVEGLARQLK+VQQR+EASEGLERDLKRLGQEAEEMHQKSHRVL EKQREMEAYRSRVEEGEALSRKL+GSLAEAEGRALQEKGAAERLMLRVSSLEGQVLEGKAALAS EADRSGILSELTA REAAA EELKAAITESTSREE+LRVEMAA RNALEAAE SLERERH+SSETRTDLV+RAEG EKRCESLQSSTKEVTQKLRDTEQRFHKELEKSKERE+ XXXXXXXXXX F+AKLGDLEKHL++ EKQLLGSQAEC+R+KEAA REVK+K XXXXXXXXXXXXXXXXXXXXXXXXXXX KTLTDKLSEGRVVEEGIR EVS REEE RNKLT LQNARIAAEQETA ARAEAAGL+NQLHDLR RFDDESARLR DVE SR RFT A SKD TTNRLEGDLARLTAQ
Sbjct: 10 DDRRALSAESEQMHAKMDFQVDERVREALEEHNTREQALIQDIDALRLALRECKQELAKTKKDASAAAMEDSTKFNISGETVSWSPFRVRKAWRELLAEAIHASKAVEQDILCRKDLEKEVERLKGELKQADIRLDSLSVDLAQKNKMVDKIAELQRTTGEAQEGLRAANNRFNEEVMRMNADVANAENALEKSSRECRRLEAAVDDAIADKEQAQALVEAERTEVKRLSLAAVSTETALTEANSKVEGLARQLKNVQQRMEASEGLERDLKRLGQEAEEMHQKSHRVLVEKQREMEAYRSRVEEGEALSRKLQGSLAEAEGRALQEKGAAERLMLRVSSLEGQVLEGKAALASIEADRSGILSELTAAREAAAWAEELKAAITESTSREESLRVEMAATRNALEAAETSLERERHVSSETRTDLVRRAEGTEKRCESLQSSTKEVTQKLRDTEQRFHKELEKSKERETEMWAQLQQVSSNFAXXXXXXXXXXTLFNAKLGDLEKHLNETEKQLLGSQAECVRLKEAAHREVKDKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTLTDKLSEGRVVEEGIR----EVSEREEEARNKLTVLQNARIAAEQETAAARAEAAGLKNQLHDLRTRFDDESARLREDVEVSRMRFTAATSKD-----------------------TTNRLEGDLARLTAQ 679
BLAST of mRNA_E-fasciculatus_F_contig1560.3893.1 vs. uniprot
Match: D7FVQ3_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ3_ECTSI) HSP 1 Score: 274 bits (700), Expect = 5.160e-82 Identity = 134/145 (92.41%), Postives = 139/145 (95.86%), Query Frame = 1
Query: 124 MENSAFRSAAPTHSVLDRRSGEVAKNRLLNLAFEDSSPDHLREDNTEEPKSVPADVFKQGVREHAIMLGMLLPGDDNFLWIAEESLLAPLPEGWLQLKDEQSGHPYYYNQASGDSSWEHPRDNFYKEIYRQKKARQHKRAFTLSS 558
MENSAFRSAAPTHSVLDRRSGE AKNRLLNLAFED SPDHLREDNTEEPKSVPADVFKQGV+EHAIMLGMLLP D+NFLWIAEESLLAPLPEGWLQLKDEQSGHPYYYNQASGDSSWEHPRD+FYKEIYRQKKARQ + AFT +S
Sbjct: 1 MENSAFRSAAPTHSVLDRRSGEFAKNRLLNLAFEDGSPDHLREDNTEEPKSVPADVFKQGVQEHAIMLGMLLPEDENFLWIAEESLLAPLPEGWLQLKDEQSGHPYYYNQASGDSSWEHPRDSFYKEIYRQKKARQQEDAFTRTS 145
BLAST of mRNA_E-fasciculatus_F_contig1560.3893.1 vs. uniprot
Match: A0A5D6XVX7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVX7_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 2.420e-16 Identity = 53/143 (37.06%), Postives = 78/143 (54.55%), Query Frame = 1
Query: 160 HSVLDRRSGEVAKNRLLNLAFED-------------------SSPDHLREDNTEEPKSVPADVFKQGVREHAIMLGMLLPGDDNFLWIAEESLLAPLPEGWLQLKDEQSGHPYYYNQASGDSSWEHPRDNFYKEIYRQKKARQ 531
HS R S + + LL+LAF+ +S L +D + ++ ++F GV EHA LGM + +FLW+A ESL+APLP+GW +SG PYYYN SG+S W+HP D+ +++IYR+ K +Q
Sbjct: 33 HSARRRNSQQQQQLELLDLAFQGHGECAAFEAFELPPMLTTAASTSTLLQDESARMEAADPELFHAGVEEHARRLGMDPERERDFLWLARESLVAPLPDGWFHATASESGAPYYYNDRSGESRWDHPCDDQFRQIYRELKLQQ 175
BLAST of mRNA_E-fasciculatus_F_contig1560.3893.1 vs. uniprot
Match: A0A225X335_9STRA (Kinesin n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X335_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 2.240e-15 Identity = 38/81 (46.91%), Postives = 58/81 (71.60%), Query Frame = 1
Query: 289 VFKQGVREHAIMLGMLLPGDDNFLWIAEESLLAPLPEGWLQLKDEQSGHPYYYNQASGDSSWEHPRDNFYKEIYRQKKARQ 531
+F+ V EHA LG+ D FLWIA ESL+APLP+GW + ++G PYYYN+ SG+S W+HP D+ +++++R++K +Q
Sbjct: 101 LFQAAVEEHARRLGIDPTADAEFLWIARESLVAPLPDGWYHVTATETGQPYYYNEISGESRWDHPSDDHFRQVFRERKQKQ 181
BLAST of mRNA_E-fasciculatus_F_contig1560.3893.1 vs. uniprot
Match: A0A7S2PFW9_9STRA (Kinesin-like protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PFW9_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 4.670e-15 Identity = 48/101 (47.52%), Postives = 60/101 (59.41%), Query Frame = 1
Query: 274 SVPADVFKQGVREHAIMLGMLLPGDDNFLWIAEESLLAPLPEGWLQLKDEQSGHPYYYNQASGDSSWEHPRDNFYKEIYRQKKARQHKRAFTLSSLMPPEP 576
++P D+F+QGV E A LGM D LWIAE SLLAPLP W QL + S YYYN A+G+S W HP D Y+++Y +KKA Q L + P P
Sbjct: 17 TLPPDLFRQGVMEQAECLGMNPEVDSELLWIAERSLLAPLPPNWAQLTTD-SNQIYYYNSATGESDWNHPSDEAYRQLYLRKKAEQASTGGLLENFHPNPP 116
BLAST of mRNA_E-fasciculatus_F_contig1560.3893.1 vs. uniprot
Match: H3GC21_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GC21_PHYRM) HSP 1 Score: 91.7 bits (226), Expect = 6.880e-15 Identity = 41/96 (42.71%), Postives = 62/96 (64.58%), Query Frame = 1
Query: 289 VFKQGVREHAIMLGMLLPGDDNFLWIAEESLLAPLPEGWLQLKDEQSGHPYYYNQASGDSSWEHPRDNFYKEIYRQKKARQHKRAFTLSSLMPPEP 576
+F+ V EHA LGM D LW+A ESL+APLP+GW + ++G PYYYN+ SG+S W+HP D+ ++ ++R+ K +Q +A ++L P P
Sbjct: 103 LFQAAVEEHARRLGMDPVADAELLWVARESLVAPLPDGWYHVTATETGQPYYYNELSGESRWDHPSDDQFRHVFRELKQKQLMQAKAHAALRDPHP 198
BLAST of mRNA_E-fasciculatus_F_contig1560.3893.1 vs. uniprot
Match: G4ZL75_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZL75_PHYSP) HSP 1 Score: 91.3 bits (225), Expect = 9.100e-15 Identity = 54/146 (36.99%), Postives = 84/146 (57.53%), Query Frame = 1
Query: 100 IAHGHAVGMENSAFRSAAPTHSVLDRRSGEVAKNRLLNLAFEDSSPDHLREDNTEEPKSVPADVFKQGVREHAIMLGMLLPGDDNFLWIAEESLLAPLPEGWLQLKDEQSGHPYYYNQASGDSSWEHPRDNFYKEIYRQKKARQHK 537
+A G + + ++ R+AA H+ +G A + L LA ++S+ S PA +F V EHA LG+ D FLWIA ESL+APLP+GW + ++G PYYYN+ SG+S W+HP D+ +++++R+ K +Q K
Sbjct: 72 VASGEGIPV-SALPRAAASWHAG----NGSAASYKSLPLAQDESAMMEA---------SDPA-LFHAAVEEHARRLGIEPTVDGEFLWIARESLVAPLPDGWYHVTATETGQPYYYNEISGESRWDHPSDDQFRQLFREMKQKQMK 202
BLAST of mRNA_E-fasciculatus_F_contig1560.3893.1 vs. uniprot
Match: A0A833WKY5_PHYIN (Kinesin motor domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WKY5_PHYIN) HSP 1 Score: 90.5 bits (223), Expect = 1.540e-14 Identity = 45/104 (43.27%), Postives = 69/104 (66.35%), Query Frame = 1
Query: 226 DSSPDHLREDNTEEPKSVPADVFKQGVREHAIMLGMLLPGDDNFLWIAEESLLAPLPEGWLQLKDEQSGHPYYYNQASGDSSWEHPRDNFYKEIYRQKKARQHK 537
DS+P L +++ S PA +F+ V EH+ LG+ D F+WIA ESL+APLP+GW + ++G PYYYN+ SG+S W+HP D+ ++++YR+ K +Q K
Sbjct: 96 DSTP--LTDESAIMEASDPA-LFQAAVEEHSRRLGIDPTHDAAFMWIARESLVAPLPDGWYHVTATETGQPYYYNEISGESRWDHPSDDHFRQVYREMKHKQVK 196
BLAST of mRNA_E-fasciculatus_F_contig1560.3893.1 vs. uniprot
Match: A0A6A5ARR3_9STRA (WW domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ARR3_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.900e-14 Identity = 42/80 (52.50%), Postives = 52/80 (65.00%), Query Frame = 1
Query: 277 VPADVFKQGVREHAIMLGMLLPGDDNFLWIAEESLLAPLPEGWLQLKDEQSGHPYYYNQASGDSSWEHPRDNFYKEIYRQ 516
V D+F +GV EH+ LGM D + LWIA +SL+A +P GW Q+ Q G PYYYN SGDS WEHP D YK +YR+
Sbjct: 112 VDPDIFMEGVMEHSKYLGMDPERDQDLLWIARKSLVADIPPGWHQVMT-QEGVPYYYNDESGDSRWEHPSDQDYKAMYRE 190 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1560.3893.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1560.3893.1 >prot_E-fasciculatus_F_contig1560.3893.1 ID=prot_E-fasciculatus_F_contig1560.3893.1|Name=mRNA_E-fasciculatus_F_contig1560.3893.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1181bp MENSAFRSAAPTHSVLDRRSGEVAKNRLLNLAFEDSSPDHLREDNTEEPKback to top mRNA from alignment at E-fasciculatus_F_contig1560:1645..17346+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1560.3893.1 ID=mRNA_E-fasciculatus_F_contig1560.3893.1|Name=mRNA_E-fasciculatus_F_contig1560.3893.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=15702bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1560:1645..17346+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1560:1645..17346+ >mRNA_E-fasciculatus_F_contig1560.3893.1 ID=mRNA_E-fasciculatus_F_contig1560.3893.1|Name=mRNA_E-fasciculatus_F_contig1560.3893.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=7086bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1560:1645..17346+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |